ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the U. S. National Science Foundation.

Typed Sites

Allele Frequency tables at the following sites for the population Hispanic American are available in ALFRED:

  • Select the sites by clicking the check-box and click on 'Retrieve Frequencies' to retrieve allele frequency tables.

    • Select Locus Site
    Alcohol Dehydrogenase 1B (class I), beta polypeptide exon3 Arg48His
    CD4 antigen (p55) C__11338582_10
    Plasminogen activator, tissue TPA25 Alu insertion
    Solute carrier family 6 (neurotransmitter transporter, dopamine), member 3 3' UTR 40 bp_ VNTR
    Angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 ACE Alu indel
    rs4343
    Adrenergic, beta-2-, receptor, surface SNP3-ADRB2
    SNP4-ADRB2
    Dopamine receptor D4 SNP29-DRD4
    SNP30-DRD4
    Von Willebrand factor vWA compound STRP
    5-hydroxytryptamine (serotonin) receptor 2A SNP114-HTR2A
    rs6314
    Ataxia telangiectasia mutated (includes complementation groups A, C and D) 14-site haplotype
    Aryl hydrocarbon receptor SNP5-AHR
    T132C
    rs2066853
    Cholinergic receptor, muscarinic 1 SNP12-CHRM1
    SNP14-CHRM1
    rs2067477
    Cholinergic receptor, muscarinic 3 C___7539584_10
    SNP15-CHRM3
    SNP16-CHRM3
    SNP17-CHRM3
    SNP18-CHRM3
    Cytochrome P450, family 1, subfamily A, polypeptide 2 SNP19-CYP1A2
    SNP20-CYP1A2
    SNP21-CYP1A2
    SNP22-CYP1A2
    Cytochrome P450, family 2, subfamily C, polypeptide 9 Arg144Cys
    Ile359Leu
    Cytochrome P450, family 3, subfamily A, polypeptide 4 APromo1G
    G-11A
    G-9C
    G12A
    Epoxide hydrolase 1, microsomal (xenobiotic) His139Arg
    Tyr113His
    Histamine N-methyltransferase SNP34-HNMT
    rs2071048
    5-hydroxytryptamine (serotonin) receptor 1A SNP35-HTR1A
    SNP36-HTR1A
    Kallikrein 2, prostatic SNP39-KLK2
    rs198972
    rs198977
    ATP-binding cassette, sub-family B (MDR/TAP), member 1 Asn21Asp
    SNP41-ABCB1
    N-acetyltransferase 2 (arylamine N-acetyltransferase) Arg197Gln
    Arg64Gln
    Gly286Glu
    Ile114Thr
    Lys268Arg
    Peroxisome proliferative activated receptor, gamma rs3856806
    Sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2 A Insertion
    Ala136Val
    Asn235Thr
    Glu282Lys
    Pro19Leu
    Transforming growth factor, beta 1 (Camurati-Engelmann disease) SNP54-TGFB1
    SNP56-TGFB1
    SNP57-TGFB1
    Lymphotoxin alpha (TNF superfamily, member 1) APromo1G
    Thr26Asn
    Tryptase, alpha SNP60-TPS1
    SNP61-TPS1
    SNP62-TPS1
    UDP glucuronosyltransferase 1 family, polypeptide A cluster Gly72Arg
    SNP66-UGT1A1
    SNP67-UGT1A1
    SNP68-UGT1A1
    SNP69-UGT1A1
    SNP73-UGT1A1
    SNP74-UGT1A1
    SNP75-UGT1A1
    Trp11Arg
    Trp208Arg
    Val47Ala
    rs2070959
    rs6759892
    UDP glycosyltransferase 2 family, polypeptide B15 SNP76-UGT2B15
    SNP77-UGT2B15
    SNP78-UGT2B15
    SNP79-UGT2B15
    SNP80-UGT2B15
    SNP81-UGT2B15
    UDP glycosyltransferase 2 family, polypeptide B4 SNP82-UGT2B4
    SNP83-UGT2B4
    Plasminogen activator, urokinase Lys231Gln
    Pro141Leu
    Apolipoprotein E SNP91-APOE
    SNP92-APOE
    rs405509
    Cholesteryl ester transfer protein, plasma SNP94-CETP
    SNP95-CETP
    Cholinergic receptor, muscarinic 4 SNP96-CHRM4
    SNP97-CHRM4
    SNP98-CHRM4
    Cytochrome P450, family 1, subfamily A, polypeptide 1 SNP100-CYP1A1
    SNP101-CYP1A1
    SNP102-CYP1A1
    rs2470893
    Cytochrome P450, family 2, subfamily D, polypeptide 6 A Ins/Del
    Pro34Ser
    SNP107-CYP2D6
    SNP109-CYP2D6
    Val136Val
    rs5030655
    5-hydroxytryptamine (serotonin) receptor 1B SNP110-HTR1B
    SNP111-HTR1B
    SNP112-HTR1B
    Coagulation factor XIII, B polypeptide FXIIIB Alu insertion
    Tyrosine hydroxylase THO1 (AATG) n tetranucleotide repeat
    Fibrinogen, A alpha polypeptide FGA tetranucleotide STRP
    D21S11 D21S11 tetranucleotide repeat (also known as HumD21S11)
    Colony stimulating factor 1 receptor, formerly McDonough feline sarcoma viral (v-fms) oncogene homolog CSF1R (AGAT)n tetranucleotide repeat
    Duffy blood group rs2814778
    Cathepsin S A521G
    SNP10-CATS
    SNP11-CATS
    SNP8-CATS
    UDP glycosyltransferase 2 family, polypeptide B7 SNP84-UGT2B7
    SNP85-UGT2B7
    SNP86-UGT2B7
    SNP88-UGT2B7
    5,10-methylenetetrahydrofolate reductase (NADPH) C677T
    D8S1179 D8S1179 tetranucleotide repeat
    D13S317 D13S317 tetranucleotide repeat
    D7S820 D7S820 tetranucleotide repeat
    Apolipoprotein A-I APO Alu insertion
    Alu insertion D1 D1 Alu insertion
    Cysteine and histidine-rich domain (CHORD)-containing, zinc binding protein 1 B65 Alu insertion
    Alu insertion A25 A25 Alu insertion
    Cadherin 13, H-cadherin (heart) PV92 Alu insertion
    L1 insertion LID1 LID1 L1 insertion
    Collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant) COL3A1 Alu insertion
    Alu insertion HS4.14 HS4.14 Alu insertion
    Alu insertion HS2.43 HS2.43 Alu insertion
    Alu insertion HS4.32 HS4.32 Alu insertion
    Alu insertion HS4.65 HS4.65 Alu insertion
    Alu insertion HS4.75 HS4.75 Alu insertion
    Alu insertion Sb19.3 Sb19.3 Alu insertion
    Alu insertion Sb19.12 Sb19.12 Alu insertion
    Alu insertion HS2.25 HS2.25 Alu insertion
    Alu insertion HS3.23 HS3.23 Alu insertion
    Alu insertion HS4.59 HS4.59 Alu insertion
    Alu insertion HS4.69 HS4.69 Alu insertion
    Alu insertion Sb19.10 Sb19.10 Alu insertion
    D3S1358 D3S1358 complex tetranucleotide repeat
    D18S51 D18S51 tetranucleotide repeat
    D5S818 D5S818 tetranucleotide repeat
    Thyroid peroxidase TPOX (AATG) n tetranucleotide repeat
    D16S539 D16S539 (GATA)n tetranucleotide repeat
    Neighbor of BRCA1 gene 1 rs8070085
    Lipoprotein, Lp(a) TTTTA pentanucleotide repeat
    Sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 C___2556113_10
    Lymphocyte antigen 9 C___1006721_1_
    Heat shock 70kDa protein 12A C___3254784_10
    Ceramide kinase-like C___1276208_10
    Human immunodeficiency virus type I enhancer binding protein 1 C___9371416_10
    Sorbin and SH3 domain containing 1 C___7538108_10
    A disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 2 C___3153696_10
    Phosphoglycerate dehydrogenase like 1 C___1619935_1_
    Spectrin repeat containing, nuclear envelope 1 C___2515223_10
    Ataxin 2-binding protein 1 rs2342747
    Ferrochelatase (protoporphyria) C___3285337_1_
    Immunoglobulin superfamily, member 4 C___2450075_10
    Frizzled homolog 3 (Drosophila) C___2049946_10
    Zinc finger protein 521 C____105475_10
    Somatostatin receptor 4 C___3206279_1_
    ATPase type 13A4 C__25749280_10
    DNA (cytosine-5-)-methyltransferase 2 C___2822618_10
    Tetratricopeptide repeat domain 1 C___1995608_10
    rs1523537 is intergenic between MRPS33P4 and RPL36P1 C___2508482_10
    rs1336071 is intergenic between LOC643432 and LOC644562 C___1817429_10
    rs1019029 is intergenic between LOC646142 and LOC646161 C___2572254_10
    rs1554472 is intergenic between FTHP2 and LOC646865 C___7428940_10
    Rho guanine nucleotide exchange factor (GEF) 1 rs2303798
    Hypothetical protein MGC4093 SNP55-TGFB1
    Similar to peptidylprolyl isomerase A isoform 1 SNP2-ACE
    Myosin VB C_2714437_10
    rs12480506 is intergenic between PPIAP17 and C20orf23 C_1274218_10
    rs315791 is intergenic between LCP2 and LOC257358 C___3032822_1_
    Similar to Golgi SNAP receptor complex member 2 (27 kDa Golgi SNARE protein) C___7459903_10
    Cytochrome P450, family 2, subfamily D, polypeptide 7 pseudogene 1 SNP108-CYP2D6
    rs6591147 is intergenic between KIAA1826 and KBTBD3 C___1636106_10
    rs1109037 is intergenic between TAF1B and GRHL1 C___2073009_10
    SLIT and NTRK-like family, member 1 C___1797119_10
    Queuine tRNA-ribosyltransferase domain containing 1 C__11907549_1_
    Olfactory receptor, family 52, subfamily S, member 1 pseudogene C___1605842_10
    Growth arrest-specific 8 rs3785181
    rs34851008 is intergenic between UGT2B7 and LOC732478 SNP87-UGT2B7
    rs901398 is intergenic between LOC729013 and GALNTL4 C___7698393_10
    rs1490413 is intergenic between LOC644357 and AJAP1 C___9630073_10
    rs917118 is intergenic between SDK1 and FOXK1 rs917118
    rs1886510 is intergenic between FGF9 and FTHL7 rs1886510
    rs727811 is intergenic between LOC728275 and LOC728316 rs727811
    rs2040411 is intergenic between LOC642757 and FLJ46257 rs2040411
    rs1335873 is intergenic between GJB6 and CRYL1 rs1335873
    Leucine rich repeat neuronal 6C rs7041158
    ATP-binding cassette, sub-family G (WHITE), member 1 rs221956
    Hect domain and RLD 2 rs12913832
    rs1321333 is intergenic between HSPEP1 and MAFB rs1321333
    Solute carrier family 24, member 5 rs1426654
    rs2304925 is intergenic between LOC728414 and FLJ45079 rs2304925
    FRAS1 related extracellular matrix 1 rs2270529
    Ring finger protein 41 rs773658
    KIAA1576 protein C___9603287_10
    Cubilin (intrinsic factor-cobalamin receptor) rs7897550
    Zinc finger protein 668 rs881929
    rs1498444 is intergenic between LOC253820 and EVI1 rs1498444
    rs730570 is intergenic between C14orf70 and DLK1 rs730570
    tripartite motif-containing 22 C___1452175_10
    mesenchyme homeobox 1 C___7477802_1_
    rs6955448 is intergenic between SDK1 and ERVK6 C__29220288_10
    rs576261 is intergenic between FBXO27 and FLJ16165 C____788229_10
    rs9866013 is intergenic between FLJ42117 and LOC339902 C__30281961_10
    GTPase activating Rap/RanGAP domain-like 4 C___7945874_10
    rs10776839 is intergenic between LOC642985 and COL5A1 C___2002375_10
    Mucin 19, oligomeric C__16156638_10
    rs4364205 is intergenic between LOC728678 and CMTM7 C__26449463_10
    forkhead box K2 C___7969752_1_
    neighbor of BRCA1 gene 2 C__11631183_10
    rs159606 is intergenic between FTHL10 and LOC285697 C___1454681_10
    rs4847034 is intergenic between LOC642337 and LOC100130867 C____376875_10
    rs993934 is intergenic between LOC728241 and LOC100131284 C___9530932_10
    rs2811231 is intergenic between HCRTR2 and GFRAL C____282853_10
    rs1294331 is intergenic between LOC440732 and KIAA1804 rs1294331
    rs2399332 is intergenic between LOC440973 and LOC389141 rs2399332
    rs4288409 is intergenic between KHDRBS3 and LOC645921 rs4288409
    nicotinate phosphoribosyltransferase domain containing 1 rs4606077
    rs590162 is intergenic between BRCC2 and LOC401708 rs590162
    rs10773760 is intergenic between FZD10 and PIWIL1 rs10773760
    rs4530059 is intergenic between C14orf144 and LOC400258 rs4530059
    rs4796362 is intergenic between ALOX12P2 and ALOX12 rs4796362
    rs2833736 is intergenic between HUNK and C21orf45 rs2833736

    © 2012 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
    Originally prototyped by Michael Osier with the aid of Kei Cheung
    Upgrades and maintenance since 2002 by Haseena Rajeevan