LO000002C Alcohol Dehydrogenase 1B (class I), beta polypeptide ADH1B 4 4q21-q23 The Class I Alcohol Dehydrogenase (ADH) gene ADH1B, previously known as ADH2. The cluster of the three Class I ADH genes is listed separately as "Alcohol Dehydrogenase, Class I Gene cluster" (UID=LO000235K). PU000004E PU000780P PU000967W PU001100C 323 3590 3604 4737 SI000002C intron3 RsaI RsaI+ (Restriction Site Absent) Ape (Chimp, Orang, Gorilla, Bonobo) Sequence A T/C SNP in intron 3 of the ADH1B gene that results in a variable RsaI restriction site. PU000004E PU000780P PU000967W PU001317M 3616 3825 5 RsaI Site Present 2=T 5'-tataaaatgttaat G T AC caacaatttttat-3' 6 RsaI Site Absent 1=C 5'-tataaaatgttaat G C AC caacaatttttat-3' SI000229N exon3 Arg47His R Sequence of at least one chimp, gorilla, and orangutan A substitution of Histidine for the ancestral Arginine allele at codon 47 in exon 3 of the ADH1B gene. PU000004E PU000780P PU000967W 3615 3824 3493 Codon 47 Arg R MslI site absent: 5'- ctgtaggaatctgt C G C acagatgaccacgt -3' 3499 Codon 47 His H MslI site present: 5'- ctgtaggaatctgt C A C acagatgaccacgt -3' SI000230F exon9 Arg369Cys R Sequence of at least one chimp, gorilla, and orangutan Substitution of Cysteine for the ancestral Arginine allele at codon 369 in exon 9 of the ADH1B gene. PU000780P PU000967W 3617 3823 3500 Codon 369 Cys C AlwNI site present: 5'-tcctattgcagtatc T GT accgtcctgacgt -3' 3494 Codon 369 Arg R AlwNI site absent: 5'-tcctattgcagtatc C GT accgtcctgacgt -3' SI001212G C_2688471 null null C_2688471 is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is a G/T SNP located in 5'upstream region of ADH1B gene. PU001755S 5735 9803 G G 5?- ctttgctgtgactaattggg G gtctgattctctgctgtaaa -3? 9804 T T 5?- ctttgctgtgactaattggg T gtctgattctctgctgtaaa -3? SI001451L C__25939834_10 null null C__25939834_10 is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is a C/T SNP which results in a synonymous substitution Valine (GTC) - Valine (GTT) at aminoacid position 204 of ADH1B gene. 10129 C C 5?-gtgctgtgtttggtgggaggg GTC ggcctatctgctgttatgggctgta -3? 10130 T T 5?-gtgctgtgtttggtgggaggg GTT ggcctatctgctgttatgggctgta -3? LO000004E D9S288 D9S288 9 9pter-p22 H. sapiens (D9S288) DNA segment containing (CA) repeat. PU000295Q PU001244L 1352 1353 1354 1355 1356 3048 SI000005F D9S288 dinucleotide STRP null null The polymorphism is comprised of 21 observed alleles and the observed allele size ranges from 115 bp to 155 bp. PU000167O PU000179R 2740 1029 115 115 allele size in base pairs 1030 117 117 allele size in base pairs 1031 119 119 allele size in base pairs 1032 121 121 allele size in base pairs 1037 131 131 allele size in base pairs 1033 123 123 allele size in base pairs 1034 125 125 allele size in base pairs 1035 127 127 allele size in base pairs 1038 133 133 allele size in base pairs 1036 129 129 allele size in base pairs 1049 155 155 allele size in base pairs 1046 149 149 allele size in base pairs 1039 135 135 allele size in base pairs 1040 137 137 allele size in base pairs 1041 139 139 allele size in base pairs 1042 141 141 allele size in base pairs 1043 143 143 allele size in base pairs 1044 145 145 allele size in base pairs 1045 147 147 allele size in base pairs 1047 151 151 allele size in base pairs 1048 153 153 allele size in base pairs LO000005F D9S286 D9S286 9 9p23-p24 H. sapiens (D9S286) DNA segment containing (CA) repeat. PU000295Q PU001244L 1342 1343 1344 1345 1346 3049 SI000006G D9S286 dinucleotide STRP null null The polymorphism is comprised of 16 observed alleles and the observed allele size ranges from 138 bp to 168 bp. PU000167O PU000179R 2741 1182 138 138 allele size in base pairs 1194 162 162 allele size in base pairs 1197 168 168 allele size in base pairs 1195 164 164 allele size in base pairs 1193 160 160 allele size in base pairs 1192 158 158 allele size in base pairs 1191 156 156 allele size in base pairs 1190 154 154 allele size in base pairs 1189 152 152 allele size in base pairs 1188 150 150 allele size in base pairs 1187 148 148 allele size in base pairs 1186 146 146 allele size in base pairs 1185 144 144 allele size in base pairs 1184 142 142 allele size in base pairs 1183 140 140 allele size in base pairs 1196 166 166 allele size in base pairs LO000006G D9S157 D9S157 9 9p23-p22 H. sapiens (D9S157) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1296 1297 1298 1299 1300 3050 SI000007H D9S157 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 217 bp to 239 bp. PU000167O PU000179R 2742 1074 227 227 allele size in base pairs 1073 225 225 allele size in base pairs 1072 223 223 allele size in base pairs 1071 221 221 allele size in base pairs 1070 219 219 allele size in base pairs 1069 217 217 allele size in base pairs 1077 233 233 allele size in base pairs 1075 229 229 allele size in base pairs 1076 231 231 allele size in base pairs 1080 239 239 allele size in base pairs 1079 237 237 allele size in base pairs 1078 235 235 allele size in base pairs LO000007H D9S171 D9S171 9 9p21-p21 H. sapiens (D9S171) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1316 1317 1318 1319 1320 3051 SI000008I D9S171 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 157 bp to 179 bp. PU000167O PU000179R 2743 1677 179 179 allele size in base pairs 1671 167 167 allele size in base pairs 1666 157 157 allele size in base pairs 1667 159 159 allele size in base pairs 1668 161 161 allele size in base pairs 1670 165 165 allele size in base pairs 1672 169 169 allele size in base pairs 1673 171 171 allele size in base pairs 1674 173 173 allele size in base pairs 1675 175 175 allele size in base pairs 1676 177 177 allele size in base pairs 1669 163 163 allele size in base pairs LO000008I D9S161 D9S161 9 9p13 H. sapiens (D9S161) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1301 1302 1303 1304 1305 3052 SI000009J D9S161 dinucleotide STRP null null The polymorphism is comprised of 16 observed alleles and the observed allele size ranges from 105 bp to 136 bp. PU000167O PU000179R 2744 958 126 126 allele size in base pairs 948 105 105 allele size in base pairs 949 108 108 allele size in base pairs 950 110 110 allele size in base pairs 951 112 112 allele size in base pairs 952 114 114 allele size in base pairs 953 116 116 allele size in base pairs 954 118 118 allele size in base pairs 955 120 120 allele size in base pairs 957 124 124 allele size in base pairs 959 128 128 allele size in base pairs 960 130 130 allele size in base pairs 961 132 132 allele size in base pairs 962 134 134 allele size in base pairs 963 136 136 allele size in base pairs 956 122 122 allele size in base pairs LO000009J D9S273 D9S273 9 9p21-q21 H. sapiens (D9S273) DNA segment containing (CA) repeat. PU000295Q PU001244L 1326 1327 1328 1329 1330 3053 SI000010B D9S273 dinucleotide STRP null null The polymorphism is comprised of 23 observed alleles and the observed allele size ranges from 197 bp to 229 bp. PU000167O PU000179R 2745 1693 215 215 allele size in base pairs 1692 214 214 allele size in base pairs 1691 213 213 allele size in base pairs 1690 212 212 allele size in base pairs 1689 211 211 allele size in base pairs 1688 210 210 allele size in base pairs 1687 209 209 allele size in base pairs 1686 208 208 allele size in base pairs 1685 207 207 allele size in base pairs 1684 206 206 allele size in base pairs 1682 203 203 allele size in base pairs 1695 217 217 allele size in base pairs 1680 199 199 allele size in base pairs 1679 197 197 allele size in base pairs 1696 219 219 allele size in base pairs 1694 216 216 allele size in base pairs 1697 221 221 allele size in base pairs 1698 223 223 allele size in base pairs 1699 225 225 allele size in base pairs 1700 227 227 allele size in base pairs 1701 229 229 allele size in base pairs 1681 201 201 allele size in base pairs 1683 205 205 allele size in base pairs LO000010B D9S175 D9S175 9 9q13-q21 H. sapiens (D9S175) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1321 1322 1323 1324 1325 3054 SI000011C D9S175 dinucleotide STRP null null The polymorphism is comprised of 22 observed alleles and the observed allele size ranges from 255 bp to 297 bp. PU000167O PU000179R 2746 1018 297 297 allele size in base pairs 1017 295 295 allele size in base pairs 1016 293 293 allele size in base pairs 1015 291 291 allele size in base pairs 998 257 257 allele size in base pairs 999 259 259 allele size in base pairs 1000 261 261 allele size in base pairs 1001 263 263 allele size in base pairs 1002 265 265 allele size in base pairs 1003 267 267 allele size in base pairs 1004 269 269 allele size in base pairs 1005 271 271 allele size in base pairs 1006 273 273 allele size in base pairs 1008 277 277 allele size in base pairs 1010 281 281 allele size in base pairs 1011 283 283 allele size in base pairs 1012 285 285 allele size in base pairs 1013 287 287 allele size in base pairs 1014 289 289 allele size in base pairs 1007 275 275 allele size in base pairs 1009 279 279 allele size in base pairs 997 255 255 allele size in base pairs LO000011C D9S167 D9S167 9 9q13-q22.3 H. sapiens (D9S167) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1311 1312 1313 1314 1315 3055 SI000012D D9S167 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 302 bp to 324 bp. PU000002C PU000281L 2747 1093 324 324 allele size in base pairs 1091 320 320 allele size in base pairs 1090 318 318 allele size in base pairs 1089 316 316 allele size in base pairs 1087 312 312 allele size in base pairs 1086 310 310 allele size in base pairs 1085 308 308 allele size in base pairs 1084 306 306 allele size in base pairs 1083 304 304 allele size in base pairs 1082 302 302 allele size in base pairs 1088 314 314 allele size in base pairs 1092 322 322 allele size in base pairs LO000012D D9S283 D9S283 9 9q13-q22 H. sapiens (D9S283) DNA segment containing (CA) repeat. PU000295Q PU001244L 1336 1337 1338 1339 1340 1341 SI000013E D9S283 dinucleotide STRP null null The polymorphism is comprised of 18 observed alleles and the observed allele size ranges from 79 bp to 113 bp. PU000167O PU000179R 2748 1451 79 79 allele size in base pairs 1454 85 85 allele size in base pairs 1452 81 81 allele size in base pairs 1462 101 101 allele size in base pairs 1455 87 87 allele size in base pairs 1456 89 89 allele size in base pairs 1457 91 91 allele size in base pairs 1458 93 93 allele size in base pairs 1459 95 95 allele size in base pairs 1461 99 99 allele size in base pairs 1463 103 103 allele size in base pairs 1464 105 105 allele size in base pairs 1465 107 107 allele size in base pairs 1466 109 109 allele size in base pairs 1467 111 111 allele size in base pairs 1468 113 113 allele size in base pairs 1453 83 83 allele size in base pairs 1460 97 97 allele size in base pairs LO000013E D9S287 D9S287 9 9q22.3 H. sapiens (D9S287) DNA segment containing (CA) repeat. PU000295Q PU001244L 1347 1348 1349 1350 1351 3056 SI000014F D9S287 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 287 bp to 309 bp. PU000167O PU000179R 2749 1149 303 303 allele size in base pairs 1152 309 309 allele size in base pairs 1150 305 305 allele size in base pairs 1148 301 301 allele size in base pairs 1147 299 299 allele size in base pairs 1146 297 297 allele size in base pairs 1145 295 295 allele size in base pairs 1144 293 293 allele size in base pairs 1143 291 291 allele size in base pairs 1142 289 289 allele size in base pairs 1141 287 287 allele size in base pairs 1151 307 307 allele size in base pairs LO000014F D9S279 D9S279 9 9q32-q33 H. sapiens (D9S279) DNA segment containing (CA) repeat. PU000295Q PU001244L 1331 1332 1333 1334 1335 SI000015G D9S279 dinucleotide STRP null null The polymorphism is comprised of 17 observed alleles and the observed allele size ranges from 211 bp to 243 bp. PU000167O PU000179R 2750 1134 233 233 allele size in base pairs 1139 243 243 allele size in base pairs 1138 241 241 allele size in base pairs 1137 239 239 allele size in base pairs 1135 235 235 allele size in base pairs 1133 231 231 allele size in base pairs 1132 229 229 allele size in base pairs 1131 227 227 allele size in base pairs 1130 225 225 allele size in base pairs 1129 223 223 allele size in base pairs 1128 221 221 allele size in base pairs 1127 219 219 allele size in base pairs 1126 217 217 allele size in base pairs 1125 215 215 allele size in base pairs 1124 213 213 allele size in base pairs 1123 211 211 allele size in base pairs 1136 237 237 allele size in base pairs LO000015G D9S290 D9S290 9 9q32-q34.1 H. sapiens (D9S290) DNA segment containing (CA) repeat. PU000295Q PU001244L 1357 1358 1359 1360 1361 3057 SI000016H D9S290 dinucleotide STRP null null The polymorphism is comprised of 16 observed alleles and the observed allele size ranges from 236 bp to 264 bp. PU000167O PU000179R 2751 1383 246 246 allele size in base pairs 1382 244 244 allele size in base pairs 1381 242 242 allele size in base pairs 1380 240 240 allele size in base pairs 1379 238 238 allele size in base pairs 1378 236 236 allele size in base pairs 1393 264 264 allele size in base pairs 1392 262 262 allele size in base pairs 1391 260 260 allele size in base pairs 1390 258 258 allele size in base pairs 1389 256 256 allele size in base pairs 1388 254 254 allele size in base pairs 1387 252 252 allele size in base pairs 1386 250 250 allele size in base pairs 1385 249 249 allele size in base pairs 1384 248 248 allele size in base pairs LO000016H D9S164 D9S164 9 9q34 H. sapiens (D9S164) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1306 1307 1308 1309 1310 3058 SI000017I D9S164 dinucleotide STRP null null The polymorphism is comprised of 27 observed alleles and the observed allele size ranges from 68 bp to 104 bp. PU000167O PU000179R 2752 1165 86 86 allele size in base pairs 1178 100 100 allele size in base pairs 1177 98 98 allele size in base pairs 1176 97 97 allele size in base pairs 1175 96 96 allele size in base pairs 1174 95 95 allele size in base pairs 1173 94 94 allele size in base pairs 1172 93 93 allele size in base pairs 1171 92 92 allele size in base pairs 1170 91 91 allele size in base pairs 1169 90 90 allele size in base pairs 1168 89 89 allele size in base pairs 1166 87 87 allele size in base pairs 1164 84 84 allele size in base pairs 1163 82 82 allele size in base pairs 1162 80 80 allele size in base pairs 1161 79 79 allele size in base pairs 1160 78 78 allele size in base pairs 1159 77 77 allele size in base pairs 1158 76 76 allele size in base pairs 1157 74 74 allele size in base pairs 1156 72 72 allele size in base pairs 1155 70 70 allele size in base pairs 1154 68 68 allele size in base pairs 1167 88 88 allele size in base pairs 1179 102 102 allele size in base pairs 1180 104 104 allele size in base pairs LO000057M D10S249 D10S249 10 10pter H. sapiens (D10S249) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1427 1428 1429 1430 1431 3059 SI000019K D10S249 dinucleotide STRP null null The polymorphism is comprised of 11 observed alleles and the observed allele size ranges from 114 bp to 134 bp. PU000167O PU000179R 2753 1662 130 130 allele size in base pairs 1663 132 132 allele size in base pairs 1664 134 134 allele size in base pairs 1661 128 128 allele size in base pairs 1656 118 118 allele size in base pairs 1654 114 114 allele size in base pairs 1655 116 116 allele size in base pairs 1657 120 120 allele size in base pairs 1658 122 122 allele size in base pairs 1659 124 124 allele size in base pairs 1660 126 126 allele size in base pairs LO000058N D10S591 D10S591 10 10p15 H. sapiens (D10S591) DNA segment containing (CA) repeat. PU000295Q PU001244L 1457 1458 1459 1460 1461 3060 SI000020C D10S591 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 311 bp to 333 bp. PU000167O PU000179R 2754 1278 333 333 allele size in base pairs 1277 331 331 allele size in base pairs 1276 329 329 allele size in base pairs 1273 323 323 allele size in base pairs 1272 321 321 allele size in base pairs 1271 319 319 allele size in base pairs 1270 317 317 allele size in base pairs 1269 315 315 allele size in base pairs 1268 313 313 allele size in base pairs 1267 311 311 allele size in base pairs 1274 325 325 allele size in base pairs 1275 327 327 allele size in base pairs LO000059O D10S189 D10S189 10 10p15 H. sapiens (D10S189) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1374 1375 1376 1377 1378 1379 SI000021D D10S189 dinucleotide STRP null null The polymorphism is comprised of 6 observed alleles and the observed allele size ranges from 180 bp to 190 bp. PU000167O PU000179R 2755 1317 190 190 allele size in base pairs 1316 188 188 allele size in base pairs 1315 186 186 allele size in base pairs 1314 184 184 allele size in base pairs 1313 182 182 allele size in base pairs 1312 180 180 allele size in base pairs LO000060G D10S547 D10S547 10 10p13-p14 H. sapiens (D10S547) DNA segment containing (CA) repeat. PU000295Q PU001244L 1437 1438 1439 1440 1441 3061 SI000022E D10S547 dinucleotide STRP null null The polymorphism is comprised of 11 observed alleles and the observed allele size ranges from 231 bp to 251 bp. PU000167O PU000179R 2756 1628 239 239 allele size in base pairs 1625 233 233 allele size in base pairs 1627 237 237 allele size in base pairs 1624 231 231 allele size in base pairs 1629 241 241 allele size in base pairs 1630 243 243 allele size in base pairs 1631 245 245 allele size in base pairs 1632 247 247 allele size in base pairs 1633 249 249 allele size in base pairs 1634 251 251 allele size in base pairs 1626 235 235 allele size in base pairs LO000061H D10S191 D10S191 10 10p13-p14 H. sapiens (D10S191) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1385 1386 1387 1388 1389 3062 SI000023F D10S191 dinucleotide STRP null null The polymorphism is comprised of 16 observed alleles and the observed allele size ranges from 122 bp to 152 bp. PU000167O PU000179R 2757 1104 140 140 allele size in base pairs 1110 152 152 allele size in base pairs 1109 150 150 allele size in base pairs 1108 148 148 allele size in base pairs 1107 146 146 allele size in base pairs 1105 142 142 allele size in base pairs 1103 138 138 allele size in base pairs 1102 136 136 allele size in base pairs 1101 134 134 allele size in base pairs 1100 132 132 allele size in base pairs 1099 130 130 allele size in base pairs 1098 128 128 allele size in base pairs 1097 126 126 allele size in base pairs 1096 124 124 allele size in base pairs 1106 144 144 allele size in base pairs 1095 122 122 allele size in base pairs LO000062I D10S548 D10S548 10 10p13-p14 H. sapiens (D10S548) DNA segment containing (CA) repeat. PU000295Q PU001244L 1442 1443 1444 1445 1446 3063 SI000024G D10S548 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 183 bp to 205 bp. PU000167O PU000179R 2758 1367 187 187 allele size in base pairs 1366 185 185 allele size in base pairs 1368 189 189 allele size in base pairs 1369 191 191 allele size in base pairs 1370 193 193 allele size in base pairs 1372 197 197 allele size in base pairs 1371 195 195 allele size in base pairs 1365 183 183 allele size in base pairs 1373 199 199 allele size in base pairs 1376 205 205 allele size in base pairs 1375 203 203 allele size in base pairs 1374 201 201 allele size in base pairs LO000063J D10S197 D10S197 10 10p12 H. sapiens (D10S197) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1395 1396 1397 1398 1399 3064 SI000025H D10S197 dinucleotide STRP null null The polymorphism is comprised of 11 observed alleles and the observed allele size ranges from 157 bp to 177 bp. PU000167O PU000179R 2759 970 167 167 allele size in base pairs 971 169 169 allele size in base pairs 972 171 171 allele size in base pairs 973 173 173 allele size in base pairs 974 175 175 allele size in base pairs 975 177 177 allele size in base pairs 967 161 161 allele size in base pairs 969 165 165 allele size in base pairs 968 163 163 allele size in base pairs 965 157 157 allele size in base pairs 966 159 159 allele size in base pairs LO000064K D10S208 D10S208 10 10p11 H. sapiens (D10S208) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1405 1406 1407 1408 1409 3065 SI000026I D10S208 dinucleotide STRP null null The polymorphism is comprised of 17 observed alleles and the observed allele size ranges from 158 bp to 190 bp. PU000167O PU000179R 2760 1060 176 176 allele size in base pairs 1067 190 190 allele size in base pairs 1066 188 188 allele size in base pairs 1065 186 186 allele size in base pairs 1064 184 184 allele size in base pairs 1063 182 182 allele size in base pairs 1061 178 178 allele size in base pairs 1059 174 174 allele size in base pairs 1058 172 172 allele size in base pairs 1057 170 170 allele size in base pairs 1056 168 168 allele size in base pairs 1051 158 158 allele size in base pairs 1052 160 160 allele size in base pairs 1053 162 162 allele size in base pairs 1054 164 164 allele size in base pairs 1055 166 166 allele size in base pairs 1062 180 180 allele size in base pairs LO000065L D10S220 D10S220 10 10q11.2-q21.2 H. sapiens (D10S220) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1422 1423 1424 1425 1426 3066 SI000027J D10S220 dinucleotide STRP null null The polymorphism is comprised of 14 observed alleles and the observed allele size ranges from 98 bp to 124 bp. PU000167O PU000179R 2761 1397 102 102 allele size in base pairs 1408 124 124 allele size in base pairs 1407 122 122 allele size in base pairs 1406 120 120 allele size in base pairs 1405 118 118 allele size in base pairs 1402 112 112 allele size in base pairs 1404 116 116 allele size in base pairs 1401 110 110 allele size in base pairs 1400 108 108 allele size in base pairs 1399 106 106 allele size in base pairs 1398 104 104 allele size in base pairs 1396 100 100 allele size in base pairs 1395 98 98 allele size in base pairs 1403 114 114 allele size in base pairs LO000067N D10S537 D10S537 10 10q22 H. sapiens (D10S537) DNA segment containing (CA) repeat. PU000295Q PU001244L 1432 1433 1434 1435 1436 3067 SI000029L D10S537 dinucleotide STRP null null The polymorphism is comprised of 15 observed alleles and the observed allele size ranges from 136 bp to 164 bp. PU000167O PU000179R 2762 1296 136 136 allele size in base pairs 1303 150 150 allele size in base pairs 1302 148 148 allele size in base pairs 1301 146 146 allele size in base pairs 1300 144 144 allele size in base pairs 1299 142 142 allele size in base pairs 1298 140 140 allele size in base pairs 1297 138 138 allele size in base pairs 1305 154 154 allele size in base pairs 1306 156 156 allele size in base pairs 1304 152 152 allele size in base pairs 1310 164 164 allele size in base pairs 1309 162 162 allele size in base pairs 1308 160 160 allele size in base pairs 1307 158 158 allele size in base pairs LO000068O D10S201 D10S201 10 10q22 H. sapiens (D10S201) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1400 1401 1402 1403 1404 3068 SI000030D D10S201 dinucleotide STRP null null The polymorphism is comprised of 21 observed alleles and the observed allele size ranges from 267 bp to 307 bp. PU000002C 2763 1560 267 267 allele size in base pairs 1561 269 269 allele size in base pairs 1576 299 299 allele size in base pairs 1575 297 297 allele size in base pairs 1574 295 295 allele size in base pairs 1573 293 293 allele size in base pairs 1572 291 291 allele size in base pairs 1571 289 289 allele size in base pairs 1570 287 287 allele size in base pairs 1568 283 283 allele size in base pairs 1577 301 301 allele size in base pairs 1567 281 281 allele size in base pairs 1566 279 279 allele size in base pairs 1564 275 275 allele size in base pairs 1563 273 273 allele size in base pairs 1562 271 271 allele size in base pairs 1569 285 285 allele size in base pairs 1578 303 303 allele size in base pairs 1579 305 305 allele size in base pairs 1580 307 307 allele size in base pairs 1565 277 277 allele size in base pairs LO000069P D10S583 D10S583 10 10q23-q24 H. sapiens (D10S583) DNA segment containing (CA) repeat. PU000295Q PU001244L 1447 1448 1449 1450 1451 3069 SI000031E D10S583 dinucleotide STRP null null The polymorphism is comprised of 19 observed alleles and the observed allele size ranges from 185 bp to 221 bp. PU000167O PU000179R 2764 984 199 199 allele size in base pairs 977 185 185 allele size in base pairs 978 187 187 allele size in base pairs 979 189 189 allele size in base pairs 980 191 191 allele size in base pairs 981 193 193 allele size in base pairs 983 197 197 allele size in base pairs 985 201 201 allele size in base pairs 986 203 203 allele size in base pairs 982 195 195 allele size in base pairs 995 221 221 allele size in base pairs 994 219 219 allele size in base pairs 987 205 205 allele size in base pairs 988 207 207 allele size in base pairs 989 209 209 allele size in base pairs 991 213 213 allele size in base pairs 992 215 215 allele size in base pairs 993 217 217 allele size in base pairs 990 211 211 allele size in base pairs LO000070H D10S192 D10S192 10 10q23.3-1q24.1 H. sapiens (D10S192) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1390 1391 1392 1393 1394 3070 SI000032F D10S192 dinucleotide STRP null null The polymorphism is comprised of 19 observed alleles and the observed allele size ranges from 230 bp to 260 bp. PU000167O PU000179R 2765 1711 246 246 allele size in base pairs 1721 260 260 allele size in base pairs 1720 259 259 allele size in base pairs 1719 258 258 allele size in base pairs 1718 257 257 allele size in base pairs 1717 256 256 allele size in base pairs 1716 255 255 allele size in base pairs 1715 254 254 allele size in base pairs 1714 252 252 allele size in base pairs 1705 234 234 allele size in base pairs 1713 250 250 allele size in base pairs 1704 232 232 allele size in base pairs 1712 248 248 allele size in base pairs 1706 236 236 allele size in base pairs 1707 238 238 allele size in base pairs 1708 240 240 allele size in base pairs 1709 242 242 allele size in base pairs 1710 244 244 allele size in base pairs 1703 230 230 allele size in base pairs LO000071I D10S597 D10S597 10 10q25 H. sapiens (D10S597) DNA segment containing (CA) repeat. PU000295Q PU001244L 1462 1463 1464 1465 1466 3071 SI000033G D10S597 dinucleotide STRP null null The polymorphism is comprised of 11 observed alleles and the observed allele size ranges from 273 bp to 291 bp. PU000167O PU000179R 2766 1444 281 281 allele size in base pairs 1439 273 273 allele size in base pairs 1440 275 275 allele size in base pairs 1441 276 276 allele size in base pairs 1443 279 279 allele size in base pairs 1445 283 283 allele size in base pairs 1446 285 285 allele size in base pairs 1447 287 287 allele size in base pairs 1448 289 289 allele size in base pairs 1449 291 291 allele size in base pairs 1442 277 277 allele size in base pairs LO000072J D10S190 D10S190 10 10q25-q26 H. sapiens (D10S190) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1380 1381 1382 1383 1384 3072 SI000034H D10S190 dinucleotide STRP null null The polymorphism is comprised of 14 observed alleles and the observed allele size ranges from 198 bp to 224 bp. PU000002C 2767 1436 222 222 allele size in base pairs 1437 224 224 allele size in base pairs 1434 218 218 allele size in base pairs 1433 216 216 allele size in base pairs 1426 202 202 allele size in base pairs 1435 220 220 allele size in base pairs 1425 200 200 allele size in base pairs 1427 204 204 allele size in base pairs 1428 206 206 allele size in base pairs 1429 208 208 allele size in base pairs 1430 210 210 allele size in base pairs 1431 212 212 allele size in base pairs 1432 214 214 allele size in base pairs 1424 198 198 allele size in base pairs LO000073K D10S587 D10S587 10 10q26.12 H. sapiens (D10S587) DNA segment containing (CA) repeat. PU000295Q PU001244L 1452 1453 1454 1455 1456 3073 SI000035I D10S587 dinucleotide STRP null null The polymorphism is comprised of 15 observed alleles and the observed allele size ranges from 89 bp to 117 bp. PU000167O PU000179R 2768 1293 115 115 allele size in base pairs 1289 107 107 allele size in base pairs 1294 117 117 allele size in base pairs 1292 113 113 allele size in base pairs 1290 109 109 allele size in base pairs 1288 105 105 allele size in base pairs 1287 103 103 allele size in base pairs 1286 101 101 allele size in base pairs 1285 99 99 allele size in base pairs 1284 97 97 allele size in base pairs 1283 95 95 allele size in base pairs 1282 93 93 allele size in base pairs 1281 91 91 allele size in base pairs 1280 89 89 allele size in base pairs 1291 111 111 allele size in base pairs LO000074L D10S217 D10S217 10 10q26 H. sapiens (D10S217) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1416 1417 1418 1419 1420 1421 SI000036J D10S217 dinucleotide STRP null null The polymorphism is comprised of 17 observed alleles and the observed allele size ranges from 87 bp to 119 bp. PU000167O PU000179R 2769 1335 89 89 allele size in base pairs 1334 87 87 allele size in base pairs 1336 91 91 allele size in base pairs 1337 93 93 allele size in base pairs 1347 113 113 allele size in base pairs 1339 97 97 allele size in base pairs 1340 99 99 allele size in base pairs 1341 101 101 allele size in base pairs 1342 103 103 allele size in base pairs 1343 105 105 allele size in base pairs 1344 107 107 allele size in base pairs 1346 111 111 allele size in base pairs 1348 115 115 allele size in base pairs 1349 117 117 allele size in base pairs 1350 119 119 allele size in base pairs 1338 95 95 allele size in base pairs 1345 109 109 allele size in base pairs LO000075M D10S212 D10S212 10 10q26 H. sapiens (D10S212) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1410 1411 1412 1413 1414 1415 SI000037K D10S212 dinucleotide STRP null null The polymorphism is comprised of 10 observed alleles and the observed allele size ranges from 184 bp to 202 bp. PU000167O PU000179R 2770 1118 196 196 allele size in base pairs 1117 194 194 allele size in base pairs 1116 192 192 allele size in base pairs 1115 190 190 allele size in base pairs 1114 188 188 allele size in base pairs 1113 186 186 allele size in base pairs 1112 184 184 allele size in base pairs 1121 202 202 allele size in base pairs 1119 198 198 allele size in base pairs 1120 200 200 allele size in base pairs LO000076N D11S922 D11S922 11 11p15.5 H. sapiens (D11S922) DNA segment containing (CA) repeat PU000750M PU001244L 1578 1579 1580 1581 1582 3074 SI000038L D11S922 dinucleotide STRP null null The polymorphism is comprised of 30 observed alleles and the observed allele size ranges from 129 bp to 187 bp. PU000167O PU000179R 2771 1498 185 185 allele size in base pairs 1490 169 169 allele size in base pairs 1491 171 171 allele size in base pairs 1492 173 173 allele size in base pairs 1493 175 175 allele size in base pairs 1494 177 177 allele size in base pairs 1495 179 179 allele size in base pairs 1497 183 183 allele size in base pairs 1499 187 187 allele size in base pairs 1496 181 181 allele size in base pairs 1487 163 163 allele size in base pairs 1489 167 167 allele size in base pairs 1481 151 151 allele size in base pairs 1473 135 135 allele size in base pairs 1474 137 137 allele size in base pairs 1475 139 139 allele size in base pairs 1476 141 141 allele size in base pairs 1477 143 143 allele size in base pairs 1478 145 145 allele size in base pairs 1480 149 149 allele size in base pairs 1470 129 129 allele size in base pairs 1482 153 153 allele size in base pairs 1483 155 155 allele size in base pairs 1484 157 157 allele size in base pairs 1485 159 159 allele size in base pairs 1486 161 161 allele size in base pairs 1479 147 147 allele size in base pairs 1488 165 165 allele size in base pairs 1472 133 133 allele size in base pairs 1471 131 131 allele size in base pairs LO000077O D11S1338 D11S1338 11 11p15.5 H. sapiens (D11S1338) DNA segment containing (CA) repeat. PU000295Q PU001244L 1532 1533 1534 1535 1536 3075 SI000039M D11S1338 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 251 bp to 273 bp. PU000167O PU000179R 2772 1258 259 259 allele size in base pairs 1265 273 273 allele size in base pairs 1264 271 271 allele size in base pairs 1263 269 269 allele size in base pairs 1262 267 267 allele size in base pairs 1261 265 265 allele size in base pairs 1259 261 261 allele size in base pairs 1257 257 257 allele size in base pairs 1256 255 255 allele size in base pairs 1255 253 253 allele size in base pairs 1254 251 251 allele size in base pairs 1260 263 263 allele size in base pairs LO000078P D11S902 D11S902 11 11p15-p13 H. sapiens (D11S902) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1558 1559 1560 1561 1562 3076 SI000040E D11S902 dinucleotide STRP null null The polymorphism is comprised of 16 observed alleles and the observed allele size ranges from 138 bp to 168 bp. PU000167O PU000179R 2773 1597 142 142 allele size in base pairs 1596 140 140 allele size in base pairs 1595 138 138 allele size in base pairs 1599 146 146 allele size in base pairs 1606 160 160 allele size in base pairs 1610 168 168 allele size in base pairs 1609 166 166 allele size in base pairs 1598 144 144 allele size in base pairs 1607 162 162 allele size in base pairs 1605 158 158 allele size in base pairs 1604 156 156 allele size in base pairs 1603 154 154 allele size in base pairs 1602 152 152 allele size in base pairs 1601 150 150 allele size in base pairs 1600 148 148 allele size in base pairs 1608 164 164 allele size in base pairs LO000079Q D11S904 D11S904 11 11p15.2 H. sapiens (D11S904) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1563 1564 1565 1566 1567 3077 SI000041F D11S904 dinucleotide STRP null null The polymorphism is comprised of 11 observed alleles and the observed allele size ranges from 185 bp to 205 bp. PU000167O PU000179R 2774 1620 201 201 allele size in base pairs 1619 199 199 allele size in base pairs 1618 197 197 allele size in base pairs 1617 195 195 allele size in base pairs 1616 193 193 allele size in base pairs 1615 191 191 allele size in base pairs 1614 189 189 allele size in base pairs 1613 187 187 allele size in base pairs 1612 185 185 allele size in base pairs 1621 203 203 allele size in base pairs 1622 205 205 allele size in base pairs LO000080I D11S935 D11S935 11 11p12-p13 H. sapiens (D11S935) DNA segment containing (CA) repeat. PU000750M PU001244L 1588 1589 1590 1591 1592 3078 SI000042G D11S935 dinucleotide STRP null null The polymorphism is comprised of 13 observed alleles and the observed allele size ranges from 187 bp to 211 bp. PU000167O PU000179R 2775 1546 187 187 allele size in base pairs 1547 189 189 allele size in base pairs 1548 191 191 allele size in base pairs 1549 193 193 allele size in base pairs 1551 197 197 allele size in base pairs 1553 201 201 allele size in base pairs 1555 205 205 allele size in base pairs 1556 207 207 allele size in base pairs 1557 209 209 allele size in base pairs 1558 211 211 allele size in base pairs 1550 195 195 allele size in base pairs 1554 203 203 allele size in base pairs 1552 199 199 allele size in base pairs LO000081J D11S905 D11S905 11 11p12-p13 H. sapiens (D11S905) DNA segment containing (CA) repeat. PU000750M PU001244L 1568 1569 1570 1571 1572 3079 SI000043H D11S905 dinucleotide STRP null null The polymorphism is comprised of 17 observed alleles and the observed allele size ranges from 261 bp to 293 bp. PU000167O PU000179R 2776 1640 269 269 allele size in base pairs 1636 261 261 allele size in base pairs 1638 265 265 allele size in base pairs 1639 267 267 allele size in base pairs 1637 263 263 allele size in base pairs 1641 271 271 allele size in base pairs 1650 289 289 allele size in base pairs 1642 273 273 allele size in base pairs 1643 275 275 allele size in base pairs 1644 277 277 allele size in base pairs 1645 279 279 allele size in base pairs 1646 281 281 allele size in base pairs 1647 283 283 allele size in base pairs 1649 287 287 allele size in base pairs 1651 291 291 allele size in base pairs 1652 293 293 allele size in base pairs 1648 285 285 allele size in base pairs LO000082K D11S1313 D11S1313 11 11p11.2-11q12 H. sapiens (D11S1313) DNA segment containing (CA) repeat. PU000295Q PU001244L 1517 1518 1519 1520 1521 3080 SI000044I D11S1313 dinucleotide STRP null null The polymorphism is comprised of 10 observed alleles and the observed allele size ranges from 185 bp to 203 bp. PU000167O PU000179R 2777 1243 185 185 allele size in base pairs 1244 187 187 allele size in base pairs 1252 203 203 allele size in base pairs 1251 201 201 allele size in base pairs 1250 199 199 allele size in base pairs 1249 197 197 allele size in base pairs 1248 195 195 allele size in base pairs 1247 193 193 allele size in base pairs 1246 191 191 allele size in base pairs 1245 189 189 allele size in base pairs LO000083L D11S987 D11S987 11 null H. sapiens DNA segment containing (CA) repeat. PU000295Q PU001244L 1604 1605 1606 1607 1608 3081 SI000045J D11S987 dinucleotide STRP null null The polymorphism is comprised of 20 observed alleles and the observed allele size ranges from 93 bp to 131 bp. PU000167O PU000179R 2778 1516 123 123 allele size in base pairs 1509 109 109 allele size in base pairs 1510 111 111 allele size in base pairs 1511 113 113 allele size in base pairs 1512 115 115 allele size in base pairs 1513 117 117 allele size in base pairs 1507 105 105 allele size in base pairs 1515 121 121 allele size in base pairs 1506 103 103 allele size in base pairs 1517 125 125 allele size in base pairs 1518 127 127 allele size in base pairs 1519 129 129 allele size in base pairs 1520 131 131 allele size in base pairs 1514 119 119 allele size in base pairs 1508 107 107 allele size in base pairs 1501 93 93 allele size in base pairs 1502 95 95 allele size in base pairs 1503 97 97 allele size in base pairs 1504 99 99 allele size in base pairs 1505 101 101 allele size in base pairs LO000084M D11S1314 D11S1314 11 11q13.1-q14.3 H. sapiens (D11S1314) DNA segment containing (CA) repeat. PU000295Q PU001244L 1522 1523 1524 1525 1526 3082 SI000046K D11S1314 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 92 bp to 114 bp. PU000167O PU000179R 2779 1593 114 114 allele size in base pairs 1592 112 112 allele size in base pairs 1591 110 110 allele size in base pairs 1590 108 108 allele size in base pairs 1589 106 106 allele size in base pairs 1588 104 104 allele size in base pairs 1587 102 102 allele size in base pairs 1586 100 100 allele size in base pairs 1585 98 98 allele size in base pairs 1584 96 96 allele size in base pairs 1583 94 94 allele size in base pairs 1582 92 92 allele size in base pairs LO000085N D11S937 D11S937 11 11q13 H. sapiens (D11S937) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1593 1594 1595 1596 1597 3083 SI000047L D11S937 dinucleotide STRP null null The polymorphism is comprised of 23 observed alleles and the observed allele size ranges from 134 bp to 178 bp. PU000167O PU000179R 2780 1524 138 138 allele size in base pairs 1522 134 134 allele size in base pairs 1525 140 140 allele size in base pairs 1523 136 136 allele size in base pairs 1544 178 178 allele size in base pairs 1542 174 174 allele size in base pairs 1541 172 172 allele size in base pairs 1534 158 158 allele size in base pairs 1526 142 142 allele size in base pairs 1527 144 144 allele size in base pairs 1528 146 146 allele size in base pairs 1530 150 150 allele size in base pairs 1531 152 152 allele size in base pairs 1543 176 176 allele size in base pairs 1533 156 156 allele size in base pairs 1535 160 160 allele size in base pairs 1536 162 162 allele size in base pairs 1537 164 164 allele size in base pairs 1538 166 166 allele size in base pairs 1539 168 168 allele size in base pairs 1540 170 170 allele size in base pairs 1532 154 154 allele size in base pairs 1529 148 148 allele size in base pairs LO000086O D11S901 D11S901 11 11q14 H. sapiens (D11S901) DNA segment containing (CA) repeat. PU000750M PU001244L 1552 1553 1554 1555 1556 3084 SI000048M D11S901 dinucleotide STRP null null The polymorphism is comprised of 8 observed alleles and the observed allele size ranges from 303 bp to 317 bp. PU000002C 2781 1021 305 305 allele size in base pairs 1022 307 307 allele size in base pairs 1023 309 309 allele size in base pairs 1024 311 311 allele size in base pairs 1025 313 313 allele size in base pairs 1026 315 315 allele size in base pairs 1027 317 317 allele size in base pairs 1020 303 303 allele size in base pairs LO000087P D11S1358 D11S1358 11 11q21-q23.2 H. sapiens (D11S1358) DNA segment containing (CA) repeat. PU000295Q PU001244L 1542 1543 1544 1545 1546 SI000049N D11S1358 dinucleotide STRP null null The polymorphism is comprised of 16 observed alleles and the observed allele size ranges from 272 bp to 302 bp. PU000167O PU000179R 2782 1727 280 280 allele size in base pairs 1731 288 288 allele size in base pairs 1725 276 276 allele size in base pairs 1733 292 292 allele size in base pairs 1734 294 294 allele size in base pairs 1735 296 296 allele size in base pairs 1736 298 298 allele size in base pairs 1738 302 302 allele size in base pairs 1737 300 300 allele size in base pairs 1730 286 286 allele size in base pairs 1732 290 290 allele size in base pairs 1729 284 284 allele size in base pairs 1728 282 282 allele size in base pairs 1726 278 278 allele size in base pairs 1724 274 274 allele size in base pairs 1723 272 272 allele size in base pairs LO000088Q D11S898 D11S898 11 11q21-q23.2 H. sapiens (D11S898) DNA segment containing (CA) repeat. PU000295Q PU001244L 1547 1548 1549 1550 1551 3085 SI000050F D11S898 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 139 bp to 161 bp. PU000167O PU000179R 2783 1358 151 151 allele size in base pairs 1359 153 153 allele size in base pairs 1360 155 155 allele size in base pairs 1361 157 157 allele size in base pairs 1362 159 159 allele size in base pairs 1363 161 161 allele size in base pairs 1356 147 147 allele size in base pairs 1354 143 143 allele size in base pairs 1357 149 149 allele size in base pairs 1355 145 145 allele size in base pairs 1352 139 139 allele size in base pairs 1353 141 141 allele size in base pairs LO000089R D11S908 D11S908 11 11q23.1 H. sapiens (D11S908) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1573 1574 1575 1576 1577 3086 SI000051G D11S908 dinucleotide STRP null null The polymorphism is comprised of 13 observed alleles and the observed allele size ranges from 162 bp to 186 bp. PU000167O PU000179R 2784 1414 170 170 allele size in base pairs 1413 168 168 allele size in base pairs 1412 166 166 allele size in base pairs 1411 164 164 allele size in base pairs 1410 162 162 allele size in base pairs 1415 172 172 allele size in base pairs 1416 174 174 allele size in base pairs 1417 176 176 allele size in base pairs 1418 178 178 allele size in base pairs 1419 180 180 allele size in base pairs 1420 182 182 allele size in base pairs 1421 184 184 allele size in base pairs 1422 186 186 allele size in base pairs LO000090J D11S1345 D11S1345 11 11q23.3-q24.2 H. sapiens (D11S1345) DNA segment containing (CA) repeat. PU000295Q PU001244L 1537 1538 1539 1540 1541 SI000052H D11S1345 dinucleotide STRP null null The polymorphism is comprised of 14 observed alleles and the observed allele size ranges from 217 bp to 243 bp. PU000167O PU000179R 2785 1329 237 237 allele size in base pairs 1330 239 239 allele size in base pairs 1332 243 243 allele size in base pairs 1331 241 241 allele size in base pairs 1328 235 235 allele size in base pairs 1327 233 233 allele size in base pairs 1326 231 231 allele size in base pairs 1325 229 229 allele size in base pairs 1324 227 227 allele size in base pairs 1321 221 221 allele size in base pairs 1322 223 223 allele size in base pairs 1320 219 219 allele size in base pairs 1319 217 217 allele size in base pairs 1323 225 225 allele size in base pairs LO000091K D11S934 D11S934 11 11q23.3-q24 H. sapiens (D11S934) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1583 1584 1585 1586 1587 3087 SI000053I D11S934 dinucleotide STRP null null The polymorphism is comprised of 21 observed alleles and the observed allele size ranges from 282 bp to 320 bp. PU000167O PU000179R 2786 1217 298 298 allele size in base pairs 1216 296 296 allele size in base pairs 1215 294 294 allele size in base pairs 1214 292 292 allele size in base pairs 1229 320 320 allele size in base pairs 1211 286 286 allele size in base pairs 1213 290 290 allele size in base pairs 1210 284 284 allele size in base pairs 1209 282 282 allele size in base pairs 1221 306 306 allele size in base pairs 1223 310 310 allele size in base pairs 1227 316 316 allele size in base pairs 1212 288 288 allele size in base pairs 1228 318 318 allele size in base pairs 1226 315 315 allele size in base pairs 1225 313 313 allele size in base pairs 1224 311 311 allele size in base pairs 1222 308 308 allele size in base pairs 1220 304 304 allele size in base pairs 1219 302 302 allele size in base pairs 1218 300 300 allele size in base pairs LO000092L D11S1320 D11S1320 11 11q23.3-q24.2 H. sapiens (D11S1320) DNA segment containing (CA) repeat. PU000295Q PU001244L 1527 1528 1529 1530 1531 3088 SI000054J D11S1320 dinucleotide STRP null null The polymorphism is comprised of 9 observed alleles and the observed allele size ranges from 252 bp to 268 bp. PU000167O PU000179R 2787 1207 268 268 allele size in base pairs 1206 266 266 allele size in base pairs 1205 264 264 allele size in base pairs 1204 262 262 allele size in base pairs 1203 260 260 allele size in base pairs 1202 258 258 allele size in base pairs 1201 256 256 allele size in base pairs 1200 254 254 allele size in base pairs 1199 252 252 allele size in base pairs LO000093M D11S968 D11S968 11 11q25 H. sapiens DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1598 1599 1600 1601 1602 1603 SI000055K D11S968 dinucleotide STRP null null The polymorphism is comprised of 11 observed alleles and the observed allele size ranges from 136 bp to 156 bp. PU000167O PU000179R 2788 1241 156 156 allele size in base pairs 1240 154 154 allele size in base pairs 1239 152 152 allele size in base pairs 1238 150 150 allele size in base pairs 1237 148 148 allele size in base pairs 1236 146 146 allele size in base pairs 1235 144 144 allele size in base pairs 1234 142 142 allele size in base pairs 1233 140 140 allele size in base pairs 1232 138 138 allele size in base pairs 1231 136 136 allele size in base pairs LO000096P D7S517 D7S517 7 7p21-p22 H. sapiens (D7S517) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1226 1227 1228 1229 1230 3089 SI000057M D7S517 dinucleotide STRP null null The polymorphism is comprised of 15 observed alleles and the observed allele size ranges from 230 bp to 258 bp. PU000002C 2789 773 254 254 allele size in base pairs 775 258 258 allele size in base pairs 772 252 252 allele size in base pairs 771 250 250 allele size in base pairs 770 248 248 allele size in base pairs 769 246 246 allele size in base pairs 768 244 244 allele size in base pairs 767 242 242 allele size in base pairs 766 240 240 allele size in base pairs 765 238 238 allele size in base pairs 764 236 236 allele size in base pairs 763 234 234 allele size in base pairs 761 230 230 allele size in base pairs 774 256 256 allele size in base pairs 762 232 232 allele size in base pairs LO000097Q D7S513 D7S513 7 7p21-p22 H. sapiens (D7S513) DNA segment containing (CA) repeat. PU000294P PU001244L 1215 1216 1217 1218 1219 1220 SI000058N D7S513 dinucleotide STRP null null The polymorphism is comprised of 21 observed alleles and the observed allele size ranges from 165 bp to 205 bp. PU000002C 2790 897 187 187 allele size in base pairs 906 205 205 allele size in base pairs 905 203 203 allele size in base pairs 904 201 201 allele size in base pairs 903 199 199 allele size in base pairs 902 197 197 allele size in base pairs 901 195 195 allele size in base pairs 900 193 193 allele size in base pairs 898 189 189 allele size in base pairs 896 185 185 allele size in base pairs 895 183 183 allele size in base pairs 894 181 181 allele size in base pairs 893 179 179 allele size in base pairs 892 177 177 allele size in base pairs 891 175 175 allele size in base pairs 890 173 173 allele size in base pairs 889 171 171 allele size in base pairs 888 169 169 allele size in base pairs 887 167 167 allele size in base pairs 886 165 165 allele size in base pairs 899 191 191 allele size in base pairs LO000100B D7S516 D7S516 7 7p14 H. sapiens (D7S516) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1221 1222 1223 1224 1225 3090 SI000061H D7S516 dinucleotide STRP null null The polymorphism is comprised of 9 observed alleles and the observed allele size ranges from 308 bp to 324 bp. PU000002C 2791 944 320 320 allele size in base pairs 945 322 322 allele size in base pairs 946 324 324 allele size in base pairs 941 314 314 allele size in base pairs 940 312 312 allele size in base pairs 939 310 310 allele size in base pairs 938 308 308 allele size in base pairs 942 316 316 allele size in base pairs 943 318 318 allele size in base pairs LO000101C D7S484 D7S484 7 7p21-p15 H. sapiens (D7S484) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1205 1206 1207 1208 1209 3091 SI000062I D7S484 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 97 bp to 119 bp. PU000002C 2792 729 113 113 allele size in base pairs 732 119 119 allele size in base pairs 730 115 115 allele size in base pairs 728 111 111 allele size in base pairs 727 109 109 allele size in base pairs 726 107 107 allele size in base pairs 725 105 105 allele size in base pairs 724 103 103 allele size in base pairs 723 101 101 allele size in base pairs 722 99 99 allele size in base pairs 721 97 97 allele size in base pairs 731 117 117 allele size in base pairs LO000102D D7S510 D7S510 7 7p13 H. sapiens (D7S510) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1210 1211 1212 1213 1214 3092 SI000063J D7S510 dinucleotide STRP null null The polymorphism is comprised of 15 observed alleles and the observed allele size ranges from 74 bp to 102 bp. PU000002C 2793 846 74 74 allele size in base pairs 858 98 98 allele size in base pairs 857 96 96 allele size in base pairs 856 94 94 allele size in base pairs 855 92 92 allele size in base pairs 854 90 90 allele size in base pairs 853 88 88 allele size in base pairs 852 86 86 allele size in base pairs 851 84 84 allele size in base pairs 850 82 82 allele size in base pairs 849 80 80 allele size in base pairs 860 102 102 allele size in base pairs 847 76 76 allele size in base pairs 848 78 78 allele size in base pairs 859 100 100 allele size in base pairs LO000104F D7S669 D7S669 7 7q11.2 H. sapiens (D7S669) DNA segment containing (CA) repeat. PU000295Q PU001244L 1246 1247 1248 1249 1250 3093 SI000065L D7S669 dinucleotide STRP null null The polymorphism is comprised of 17 observed alleles and the observed allele size ranges from 157 bp to 189 bp. PU000002C 2794 822 175 175 allele size in base pairs 816 163 163 allele size in base pairs 828 187 187 allele size in base pairs 827 185 185 allele size in base pairs 826 183 183 allele size in base pairs 825 181 181 allele size in base pairs 824 179 179 allele size in base pairs 823 177 177 allele size in base pairs 821 173 173 allele size in base pairs 819 169 169 allele size in base pairs 817 165 165 allele size in base pairs 815 161 161 allele size in base pairs 814 159 159 allele size in base pairs 813 157 157 allele size in base pairs 818 167 167 allele size in base pairs 829 189 189 allele size in base pairs 820 171 171 allele size in base pairs LO000105G D7S657 D7S657 7 7q21-q22 H. sapiens (D7S657) DNA segment containing (CA) repeat. PU000295Q PU001244L 1241 1242 1243 1244 1245 3094 SI000066M D7S657 dinucleotide STRP null null Being Curated PU000002C 2795 927 245 245 allele size in base pairs 936 263 263 allele size in base pairs 935 261 261 allele size in base pairs 934 259 259 allele size in base pairs 933 257 257 allele size in base pairs 932 255 255 allele size in base pairs 931 253 253 allele size in base pairs 930 251 251 allele size in base pairs 928 247 247 allele size in base pairs 926 243 243 allele size in base pairs 925 241 241 allele size in base pairs 924 239 239 allele size in base pairs 923 237 237 allele size in base pairs 922 235 235 allele size in base pairs 921 233 233 allele size in base pairs 929 249 249 allele size in base pairs LO000108J D7S530 D7S530 7 7q31-q35 H. sapiens (D7S530) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1231 1232 1233 1234 1235 3095 SI000069P D7S530 dinucleotide STRP null null The polymorphism is comprised of 17 observed alleles and the observed allele size ranges from 98 bp to 130 bp. PU000002C 2796 793 130 130 allele size in base pairs 792 128 128 allele size in base pairs 791 126 126 allele size in base pairs 790 124 124 allele size in base pairs 787 118 118 allele size in base pairs 786 116 116 allele size in base pairs 785 114 114 allele size in base pairs 784 112 112 allele size in base pairs 783 110 110 allele size in base pairs 782 108 108 allele size in base pairs 781 106 106 allele size in base pairs 780 104 104 allele size in base pairs 779 102 102 allele size in base pairs 778 100 100 allele size in base pairs 777 98 98 allele size in base pairs 788 120 120 allele size in base pairs 789 122 122 allele size in base pairs LO000109K D7S640 D7S640 7 7q32 H. sapiens (D7S640) DNA segment containing (CA) repeat. PU000295Q PU001244L 1236 1237 1238 1239 1240 3096 SI000070H D7S640 dinucleotide STRP null null The polymorphism is comprised of 23 observed alleles and the observed allele size ranges from 103 bp to 147 bp. PU000002C 2797 882 143 143 allele size in base pairs 884 147 147 allele size in base pairs 862 103 103 allele size in base pairs 881 141 141 allele size in base pairs 880 139 139 allele size in base pairs 879 137 137 allele size in base pairs 878 135 135 allele size in base pairs 877 133 133 allele size in base pairs 876 131 131 allele size in base pairs 875 129 129 allele size in base pairs 883 145 145 allele size in base pairs 874 127 127 allele size in base pairs 873 125 125 allele size in base pairs 872 123 123 allele size in base pairs 871 121 121 allele size in base pairs 870 119 119 allele size in base pairs 869 117 117 allele size in base pairs 868 115 115 allele size in base pairs 867 113 113 allele size in base pairs 866 111 111 allele size in base pairs 865 109 109 allele size in base pairs 864 107 107 allele size in base pairs 863 105 105 allele size in base pairs LO000113F D8S504 D8S504 8 8p23 H. sapiens (D8S504) DNA segment containing (CA) repeat. PU000295Q PU001244L 1266 1267 1268 1269 1270 3097 SI000074L D8S504 dinucleotide STRP null null The polymorphism is comprised of 10 observed alleles and the observed allele size ranges from 127 bp to 145 bp. PU000002C 2798 742 143 143 allele size in base pairs 741 141 141 allele size in base pairs 740 139 139 allele size in base pairs 739 137 137 allele size in base pairs 738 135 135 allele size in base pairs 737 133 133 allele size in base pairs 736 131 131 allele size in base pairs 735 129 129 allele size in base pairs 734 127 127 allele size in base pairs 743 145 145 allele size in base pairs LO000116I D8S258 D8S258 8 8p22-p23 H. sapiens (D8S258) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1251 1252 1253 1254 1255 3098 SI000077O D8S258 dinucleotide STRP null null The polymorphism is comprised of 17 observed alleles and the observed allele size ranges from 132 bp to 160 bp. PU000002C 2799 800 142 142 allele size in base pairs 799 140 140 allele size in base pairs 798 138 138 allele size in base pairs 797 136 136 allele size in base pairs 796 134 134 allele size in base pairs 795 132 132 allele size in base pairs 803 146 146 allele size in base pairs 801 143 143 allele size in base pairs 802 144 144 allele size in base pairs 811 160 160 allele size in base pairs 810 158 158 allele size in base pairs 809 156 156 allele size in base pairs 808 154 154 allele size in base pairs 807 152 152 allele size in base pairs 806 151 151 allele size in base pairs 805 150 150 allele size in base pairs 804 148 148 allele size in base pairs LO000119L D8S260 D8S260 8 8q12-q13 H. sapiens (D8S260) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1256 1257 1258 1259 1260 3099 SI000080I D8S260 dinucleotide STRP null null The polymorphism is comprised of 15 observed alleles and the observed allele size ranges from 186 bp to 214 bp. PU000002C 2800 745 186 186 allele size in base pairs 746 188 188 allele size in base pairs 759 214 214 allele size in base pairs 758 212 212 allele size in base pairs 757 210 210 allele size in base pairs 756 208 208 allele size in base pairs 755 206 206 allele size in base pairs 754 204 204 allele size in base pairs 753 202 202 allele size in base pairs 752 200 200 allele size in base pairs 751 198 198 allele size in base pairs 750 196 196 allele size in base pairs 749 194 194 allele size in base pairs 748 192 192 allele size in base pairs 747 190 190 allele size in base pairs LO000123G D8S514 D8S514 8 8q24.13 H. sapiens (D8S514) DNA segment containing (CA) repeat. PU000295Q PU001244L 1271 1272 1273 1274 1275 3100 SI000084M D8S514 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 206 bp to 228 bp. PU000002C 2801 911 212 212 allele size in base pairs 910 210 210 allele size in base pairs 909 208 208 allele size in base pairs 908 206 206 allele size in base pairs 914 218 218 allele size in base pairs 912 214 214 allele size in base pairs 913 216 216 allele size in base pairs 918 226 226 allele size in base pairs 917 224 224 allele size in base pairs 916 222 222 allele size in base pairs 915 220 220 allele size in base pairs 919 228 228 allele size in base pairs LO000125I D8S272 D8S272 8 8q24.13-qter H. sapiens (D8S272) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 1261 1262 1263 1264 1265 3101 SI000086O D8S272 dinucleotide STRP null null The polymorphism is comprised of 14 observed alleles and the observed allele size ranges from 230 bp to 256 bp. PU000002C 2802 831 230 230 allele size in base pairs 832 232 232 allele size in base pairs 844 256 256 allele size in base pairs 843 254 254 allele size in base pairs 842 252 252 allele size in base pairs 841 250 250 allele size in base pairs 840 248 248 allele size in base pairs 839 246 246 allele size in base pairs 838 244 244 allele size in base pairs 837 242 242 allele size in base pairs 836 240 240 allele size in base pairs 835 238 238 allele size in base pairs 834 236 236 allele size in base pairs 833 234 234 allele size in base pairs LO000127K D5S406 D5S406 5 5p15 H. sapiens (D5S406) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 814 815 1046 1047 1048 3102 SI000087P D5S406 dinucleotide STRP null null The polymorphism is comprised of 20 observed alleles and the observed allele size ranges from 160 bp to 198 bp. PU000002C 2803 242 198 198 allele size in base pairs 229 172 172 allele size in base pairs 241 196 196 allele size in base pairs 240 194 194 allele size in base pairs 239 192 192 allele size in base pairs 238 190 190 allele size in base pairs 237 188 188 allele size in base pairs 236 186 186 allele size in base pairs 235 184 184 allele size in base pairs 234 182 182 allele size in base pairs 233 180 180 allele size in base pairs 232 178 178 allele size in base pairs 230 174 174 allele size in base pairs 228 170 170 allele size in base pairs 227 168 168 allele size in base pairs 226 166 166 allele size in base pairs 225 164 164 allele size in base pairs 224 162 162 allele size in base pairs 223 160 160 allele size in base pairs 231 176 176 allele size in base pairs LO000128L D5S630 D5S630 5 5p15.3 H. sapiens (D5S630) DNA segment containing (CA) repeat. PU000295Q PU001244L 844 845 1111 1112 1113 3103 SI000088Q D5S630 dinucleotide STRP null null The polymorphism is comprised of 47 observed alleles and the observed allele size ranges from 318 bp to 410 bp. PU000002C 2804 719 410 410 allele size in base pairs 718 408 408 allele size in base pairs 717 406 406 allele size in base pairs 716 404 404 allele size in base pairs 713 398 398 allele size in base pairs 715 402 402 allele size in base pairs 684 340 340 allele size in base pairs 683 338 338 allele size in base pairs 682 336 336 allele size in base pairs 681 334 334 allele size in base pairs 680 332 332 allele size in base pairs 679 330 330 allele size in base pairs 678 328 328 allele size in base pairs 677 326 326 allele size in base pairs 676 324 324 allele size in base pairs 675 322 322 allele size in base pairs 686 344 344 allele size in base pairs 673 318 318 allele size in base pairs 687 346 346 allele size in base pairs 674 320 320 allele size in base pairs 700 372 372 allele size in base pairs 712 396 396 allele size in base pairs 711 394 394 allele size in base pairs 710 392 392 allele size in base pairs 709 390 390 allele size in base pairs 708 388 388 allele size in base pairs 707 386 386 allele size in base pairs 706 384 384 allele size in base pairs 705 382 382 allele size in base pairs 704 380 380 allele size in base pairs 703 378 378 allele size in base pairs 685 342 342 allele size in base pairs 701 374 374 allele size in base pairs 699 370 370 allele size in base pairs 698 368 368 allele size in base pairs 697 366 366 allele size in base pairs 696 364 364 allele size in base pairs 695 362 362 allele size in base pairs 694 360 360 allele size in base pairs 693 358 358 allele size in base pairs 692 356 356 allele size in base pairs 691 354 354 allele size in base pairs 690 352 352 allele size in base pairs 689 350 350 allele size in base pairs 688 348 348 allele size in base pairs 702 376 376 allele size in base pairs 714 400 400 allele size in base pairs LO000129M D5S416 D5S416 5 5p15.1 H. sapiens (D5S416) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 820 821 1066 1067 1068 3104 SI000089R D5S416 dinucleotide STRP null null The polymorphism is comprised of 13 observed alleles and the observed allele size ranges from 274 bp to 298 bp. PU000002C 2805 582 274 274 allele size in base pairs 594 298 298 allele size in base pairs 593 296 296 allele size in base pairs 592 294 294 allele size in base pairs 591 292 292 allele size in base pairs 590 290 290 allele size in base pairs 589 288 288 allele size in base pairs 588 286 286 allele size in base pairs 587 284 284 allele size in base pairs 586 282 282 allele size in base pairs 585 280 280 allele size in base pairs 583 276 276 allele size in base pairs 584 278 278 allele size in base pairs LO000130E D5S419 D5S419 5 5p14.1 H. sapiens (D5S419) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 824 825 1072 1073 1074 3105 SI000090J D5S419 dinucleotide STRP null null The polymorphism is comprised of 13 observed alleles and the observed allele size ranges from 251 bp to 275 bp. PU000002C 2806 185 269 269 allele size in base pairs 188 275 275 allele size in base pairs 187 273 273 allele size in base pairs 184 267 267 allele size in base pairs 186 271 271 allele size in base pairs 183 265 265 allele size in base pairs 182 263 263 allele size in base pairs 181 261 261 allele size in base pairs 180 259 259 allele size in base pairs 179 257 257 allele size in base pairs 178 255 255 allele size in base pairs 177 253 253 allele size in base pairs 176 251 251 allele size in base pairs LO000131F D5S426 D5S426 5 5p12-p14 H. sapiens (D5S426) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 832 833 1087 1088 1089 3106 SI000091K D5S426 dinucleotide STRP null null The polymorphism is comprised of 17 observed alleles and the observed allele size ranges from 268 bp to 300 bp. PU000002C 2807 390 290 290 allele size in base pairs 389 288 288 allele size in base pairs 388 286 286 allele size in base pairs 387 284 284 allele size in base pairs 386 282 282 allele size in base pairs 385 280 280 allele size in base pairs 384 278 278 allele size in base pairs 383 276 276 allele size in base pairs 382 274 274 allele size in base pairs 381 272 272 allele size in base pairs 392 294 294 allele size in base pairs 379 268 268 allele size in base pairs 393 296 296 allele size in base pairs 380 270 270 allele size in base pairs 391 292 292 allele size in base pairs 395 300 300 allele size in base pairs 394 298 298 allele size in base pairs LO000132G D5S418 D5S418 5 5p12-p14 H. sapiens (D5S418) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 822 823 1069 1070 1071 3107 SI000092L D5S418 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 205 bp to 227 bp. PU000002C 2808 657 219 219 allele size in base pairs 661 227 227 allele size in base pairs 660 225 225 allele size in base pairs 659 223 223 allele size in base pairs 656 217 217 allele size in base pairs 658 221 221 allele size in base pairs 655 215 215 allele size in base pairs 654 213 213 allele size in base pairs 653 211 211 allele size in base pairs 652 209 209 allele size in base pairs 651 207 207 allele size in base pairs 650 205 205 allele size in base pairs LO000133H D5S407 D5S407 5 5q31-q33 H. sapiens (D5S407) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 816 817 1049 1050 1051 1052 3108 SI000093M D5S407 dinucleotide STRP null null The polymorphism is comprised of 18 observed alleles and the observed allele size ranges from 78 bp to 112 bp. PU000002C 2809 22 102 102 allele size in base pairs 27 112 112 allele size in base pairs 26 110 110 allele size in base pairs 25 108 108 allele size in base pairs 23 104 104 allele size in base pairs 21 100 100 allele size in base pairs 20 98 98 allele size in base pairs 19 96 96 allele size in base pairs 18 94 94 allele size in base pairs 17 92 92 allele size in base pairs 16 90 90 allele size in base pairs 15 88 88 allele size in base pairs 14 86 86 allele size in base pairs 13 84 84 allele size in base pairs 12 82 82 allele size in base pairs 10 78 78 allele size in base pairs 24 106 106 allele size in base pairs LO000134I D5S647 D5S647 5 5q12 H. sapiens (D5S647) DNA segment containing (CA) repeat. PU000295Q PU001244L 848 849 1118 1119 1120 3109 SI000094N D5S647 dinucleotide STRP null null The polymorphism is comprised of 20 observed alleles and the observed allele size ranges from 315 bp to 353 bp. PU000002C 2810 596 315 315 allele size in base pairs 599 321 321 allele size in base pairs 597 317 317 allele size in base pairs 611 345 345 allele size in base pairs 615 353 353 allele size in base pairs 614 351 351 allele size in base pairs 612 347 347 allele size in base pairs 610 343 343 allele size in base pairs 609 341 341 allele size in base pairs 608 339 339 allele size in base pairs 607 337 337 allele size in base pairs 606 335 335 allele size in base pairs 605 333 333 allele size in base pairs 604 331 331 allele size in base pairs 603 329 329 allele size in base pairs 602 327 327 allele size in base pairs 601 325 325 allele size in base pairs 600 323 323 allele size in base pairs 613 349 349 allele size in base pairs 598 319 319 allele size in base pairs LO000135J D5S424 D5S424 5 5q13-q14 H. sapiens (D5S424) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 830 831 1083 1084 1085 1086 SI000095O D5S424 dinucleotide STRP null null The polymorphism is comprised of 14 observed alleles and the observed allele size ranges from 202 bp to 228 bp. PU000002C 2811 169 218 218 allele size in base pairs 174 228 228 allele size in base pairs 173 226 226 allele size in base pairs 172 224 224 allele size in base pairs 170 220 220 allele size in base pairs 168 216 216 allele size in base pairs 167 214 214 allele size in base pairs 166 212 212 allele size in base pairs 165 210 210 allele size in base pairs 164 208 208 allele size in base pairs 163 206 206 allele size in base pairs 162 204 204 allele size in base pairs 161 202 202 allele size in base pairs 171 222 222 allele size in base pairs LO000136K D5S428 D5S428 5 5q14 H. sapiens (D5S428) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 834 835 1091 1092 1094 3110 SI000096P D5S428 dinucleotide STRP null null The polymorphism is comprised of 9 observed alleles and the observed allele size ranges from 243 bp to 259 bp. PU000002C 2812 671 259 259 allele size in base pairs 670 257 257 allele size in base pairs 669 255 255 allele size in base pairs 668 253 253 allele size in base pairs 667 251 251 allele size in base pairs 666 249 249 allele size in base pairs 665 247 247 allele size in base pairs 664 245 245 allele size in base pairs 663 243 243 allele size in base pairs LO000137L D5S644 D5S644 5 5q14 H. sapiens (D5S644) DNA segment containing (CA) repeat. PU000295Q PU001244L 846 847 1114 1116 1117 3111 SI000097Q D5S644 dinucleotide STRP null null The polymorphism is comprised of 15 observed alleles and the observed allele size ranges from 79 bp to 101 bp. PU000002C 2813 110 83 83 allele size in base pairs 122 107 107 allele size in base pairs 121 105 105 allele size in base pairs 120 103 103 allele size in base pairs 119 101 101 allele size in base pairs 118 99 99 allele size in base pairs 117 97 97 allele size in base pairs 116 95 95 allele size in base pairs 115 93 93 allele size in base pairs 114 91 91 allele size in base pairs 113 89 89 allele size in base pairs 111 85 85 allele size in base pairs 109 81 81 allele size in base pairs 108 79 79 allele size in base pairs 112 87 87 allele size in base pairs LO000138M D5S433 D5S433 5 5q11.2-q13.3 H. sapiens (D5S433) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 838 839 1099 1100 1101 3112 SI000098R D5S433 dinucleotide STRP null null The polymorphism is comprised of 15 observed alleles and the observed allele size ranges from 62 bp to 90 bp. PU000002C 2814 199 80 80 allele size in base pairs 204 90 90 allele size in base pairs 203 88 88 allele size in base pairs 202 86 86 allele size in base pairs 200 82 82 allele size in base pairs 198 78 78 allele size in base pairs 197 76 76 allele size in base pairs 196 74 74 allele size in base pairs 195 72 72 allele size in base pairs 194 70 70 allele size in base pairs 193 68 68 allele size in base pairs 192 66 66 allele size in base pairs 191 64 64 allele size in base pairs 190 62 62 allele size in base pairs 201 84 84 allele size in base pairs LO000139N D5S421 D5S421 5 5q21.3 H. sapiens (D5S421) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 826 827 1075 1076 1077 3113 SI000099S D5S421 dinucleotide STRP null null The polymorphism is comprised of 14 observed alleles and the observed allele size ranges from 162 bp to 188 bp. PU000002C 2815 479 182 182 allele size in base pairs 477 178 178 allele size in base pairs 476 176 176 allele size in base pairs 475 174 174 allele size in base pairs 474 172 172 allele size in base pairs 473 170 170 allele size in base pairs 472 168 168 allele size in base pairs 471 166 166 allele size in base pairs 470 164 164 allele size in base pairs 469 162 162 allele size in base pairs 480 184 184 allele size in base pairs 478 180 180 allele size in base pairs 482 188 188 allele size in base pairs 481 186 186 allele size in base pairs LO000140F D5S471 D5S471 5 5q22 H. sapiens (D5S471) DNA segment containing (CA) repeat. PU000295Q PU001244L 842 843 1107 1108 1109 3114 SI000100B D5S471 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 238 bp to 258 bp. PU000002C 2816 569 238 238 allele size in base pairs 580 258 258 allele size in base pairs 579 256 256 allele size in base pairs 578 254 254 allele size in base pairs 577 252 252 allele size in base pairs 576 250 250 allele size in base pairs 575 249 249 allele size in base pairs 574 248 248 allele size in base pairs 573 246 246 allele size in base pairs 572 244 244 allele size in base pairs 571 242 242 allele size in base pairs 570 240 240 allele size in base pairs LO000141G D5S393 D5S393 5 5q31-q33 H. sapiens (D5S393) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 810 812 1038 1040 1041 3115 SI000101C D5S393 dinucleotide STRP null null The polymorphism is comprised of 18 observed alleles and the observed allele size ranges from 157 bp to 191 bp. PU000002C 2817 641 177 177 allele size in base pairs 648 191 191 allele size in base pairs 647 189 189 allele size in base pairs 646 187 187 allele size in base pairs 645 185 185 allele size in base pairs 644 183 183 allele size in base pairs 642 179 179 allele size in base pairs 640 175 175 allele size in base pairs 639 173 173 allele size in base pairs 638 171 171 allele size in base pairs 637 169 169 allele size in base pairs 636 167 167 allele size in base pairs 635 165 165 allele size in base pairs 634 163 163 allele size in base pairs 633 161 161 allele size in base pairs 632 159 159 allele size in base pairs 631 157 157 allele size in base pairs 643 181 181 allele size in base pairs LO000142H D5S436 D5S436 5 5q31-q33 H. sapiens (D5S436) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 840 841 1103 1104 1105 3116 SI000102D D5S436 dinucleotide STRP null null The polymorphism is comprised of 20 observed alleles and the observed allele size ranges from 222 bp to 260 bp. PU000002C 2818 494 242 242 allele size in base pairs 503 260 260 allele size in base pairs 502 258 258 allele size in base pairs 501 256 256 allele size in base pairs 500 254 254 allele size in base pairs 499 252 252 allele size in base pairs 498 250 250 allele size in base pairs 497 248 248 allele size in base pairs 495 244 244 allele size in base pairs 493 240 240 allele size in base pairs 492 238 238 allele size in base pairs 491 236 236 allele size in base pairs 490 234 234 allele size in base pairs 489 232 232 allele size in base pairs 488 230 230 allele size in base pairs 487 228 228 allele size in base pairs 486 226 226 allele size in base pairs 485 224 224 allele size in base pairs 484 222 222 allele size in base pairs 496 246 246 allele size in base pairs LO000143I D5S673 D5S673 5 5q32 H. sapiens (D5S673) DNA segment containing (CA) repeat. PU000295Q PU001244L 850 851 1121 1122 1123 3117 SI000103E D5S673 dinucleotide STRP null null The polymorphism is comprised of 33 observed alleles and the observed allele size ranges from 279 bp to 343 bp. PU000002C 2819 536 341 341 allele size in base pairs 507 283 283 allele size in base pairs 506 281 281 allele size in base pairs 505 279 279 allele size in base pairs 509 287 287 allele size in base pairs 510 289 289 allele size in base pairs 523 315 315 allele size in base pairs 534 337 337 allele size in base pairs 533 335 335 allele size in base pairs 532 333 333 allele size in base pairs 531 331 331 allele size in base pairs 530 329 329 allele size in base pairs 529 327 327 allele size in base pairs 528 325 325 allele size in base pairs 527 323 323 allele size in base pairs 526 321 321 allele size in base pairs 508 285 285 allele size in base pairs 524 317 317 allele size in base pairs 537 343 343 allele size in base pairs 522 313 313 allele size in base pairs 521 311 311 allele size in base pairs 520 309 309 allele size in base pairs 519 307 307 allele size in base pairs 518 305 305 allele size in base pairs 517 303 303 allele size in base pairs 516 301 301 allele size in base pairs 515 299 299 allele size in base pairs 514 297 297 allele size in base pairs 513 295 295 allele size in base pairs 512 293 293 allele size in base pairs 511 291 291 allele size in base pairs 525 319 319 allele size in base pairs 535 339 339 allele size in base pairs LO000144J D5S422 D5S422 5 5q34 H. sapiens (D5S422) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 828 829 1080 1081 1082 3118 SI000104F D5S422 dinucleotide STRP null null The polymorphism is comprised of 16 observed alleles and the observed allele size ranges from 110 bp to 140 bp. PU000002C 2820 212 122 122 allele size in base pairs 211 120 120 allele size in base pairs 210 118 118 allele size in base pairs 209 116 116 allele size in base pairs 208 114 114 allele size in base pairs 207 112 112 allele size in base pairs 206 110 110 allele size in base pairs 214 126 126 allele size in base pairs 215 128 128 allele size in base pairs 213 124 124 allele size in base pairs 221 140 140 allele size in base pairs 220 138 138 allele size in base pairs 219 136 136 allele size in base pairs 218 134 134 allele size in base pairs 217 132 132 allele size in base pairs 216 130 130 allele size in base pairs LO000145K D5S400 D5S400 5 5q34-q35 H. sapiens (D5S400) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 811 813 1043 1044 1045 3119 SI000105G D5S400 dinucleotide STRP null null The polymorphism is comprised of 23 observed alleles and the observed allele size ranges from 192 bp to 236 bp. PU000002C 2821 258 220 220 allele size in base pairs 266 236 236 allele size in base pairs 265 234 234 allele size in base pairs 264 232 232 allele size in base pairs 263 230 230 allele size in base pairs 262 228 228 allele size in base pairs 261 226 226 allele size in base pairs 259 222 222 allele size in base pairs 257 218 218 allele size in base pairs 256 216 216 allele size in base pairs 255 214 214 allele size in base pairs 254 212 212 allele size in base pairs 253 210 210 allele size in base pairs 252 208 208 allele size in base pairs 251 206 206 allele size in base pairs 250 204 204 allele size in base pairs 249 202 202 allele size in base pairs 248 200 200 allele size in base pairs 247 198 198 allele size in base pairs 246 196 196 allele size in base pairs 260 224 224 allele size in base pairs 245 194 194 allele size in base pairs 244 192 192 allele size in base pairs LO000146L D5S429 D5S429 5 5q34-q35 H. sapiens (D5S429) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 836 837 1095 1096 1097 3120 SI000106H D5S429 dinucleotide STRP null null The polymorphism is comprised of 22 observed alleles and the observed allele size ranges from 238 bp to 278 bp. PU000002C 2822 435 263 263 allele size in base pairs 443 278 278 allele size in base pairs 442 276 276 allele size in base pairs 441 274 274 allele size in base pairs 440 272 272 allele size in base pairs 439 270 270 allele size in base pairs 438 268 268 allele size in base pairs 436 264 264 allele size in base pairs 434 262 262 allele size in base pairs 433 260 260 allele size in base pairs 432 258 258 allele size in base pairs 431 256 256 allele size in base pairs 430 254 254 allele size in base pairs 429 252 252 allele size in base pairs 428 250 250 allele size in base pairs 427 248 248 allele size in base pairs 426 246 246 allele size in base pairs 425 244 244 allele size in base pairs 424 242 242 allele size in base pairs 437 266 266 allele size in base pairs 423 240 240 allele size in base pairs 422 238 238 allele size in base pairs LO000147M D5S408 D5S408 5 5q11.2-q13.3 H. sapiens (D5S408) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 818 819 1053 1054 1055 1056 SI000107I D5S408 dinucleotide STRP null null The polymorphism is comprised of 13 observed alleles and the observed allele size ranges from 247 bp to 271 bp. PU000002C 2823 331 257 257 allele size in base pairs 330 255 255 allele size in base pairs 329 253 253 allele size in base pairs 328 251 251 allele size in base pairs 327 249 249 allele size in base pairs 326 247 247 allele size in base pairs 334 263 263 allele size in base pairs 332 259 259 allele size in base pairs 333 261 261 allele size in base pairs 338 271 271 allele size in base pairs 337 269 269 allele size in base pairs 336 267 267 allele size in base pairs 335 265 265 allele size in base pairs LO000148N D6S344 D6S344 6 6p25 H. sapiens DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 881 882 1173 1174 1175 3121 SI000108J D6S344 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 145 bp to 167 bp. PU000002C 2824 307 167 167 allele size in base pairs 306 165 165 allele size in base pairs 305 163 163 allele size in base pairs 302 157 157 allele size in base pairs 304 161 161 allele size in base pairs 301 155 155 allele size in base pairs 300 153 153 allele size in base pairs 299 151 151 allele size in base pairs 298 149 149 allele size in base pairs 297 147 147 allele size in base pairs 296 145 145 allele size in base pairs 303 159 159 allele size in base pairs LO000149O D6S309 D6S309 6 6p24-p23 H. sapiens (D6S309) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 879 880 1170 1171 1172 3122 SI000109K D6S309 dinucleotide STRP null null The polymorphism is comprised of 13 observed alleles and the observed allele size ranges from 298 bp to 322 bp. PU000002C 2825 271 304 304 allele size in base pairs 270 302 302 allele size in base pairs 269 300 300 allele size in base pairs 268 298 298 allele size in base pairs 273 308 308 allele size in base pairs 274 310 310 allele size in base pairs 272 306 306 allele size in base pairs 280 322 322 allele size in base pairs 279 320 320 allele size in base pairs 278 318 318 allele size in base pairs 277 316 316 allele size in base pairs 276 314 314 allele size in base pairs 275 312 312 allele size in base pairs LO000150G D6S470 D6S470 6 6p24.1-p24.3 H. sapiens (D6S470) DNA segment containing (CA) repeat. PU000295Q PU001244L 891 892 893 1188 1189 1190 3123 SI000110C D6S470 dinucleotide STRP null null The polymorphism is comprised of 13 observed alleles and the observed allele size ranges from 121 bp to 145 bp. PU000002C 2826 551 145 145 allele size in base pairs 550 143 143 allele size in base pairs 549 141 141 allele size in base pairs 548 139 139 allele size in base pairs 547 137 137 allele size in base pairs 546 135 135 allele size in base pairs 545 133 133 allele size in base pairs 544 131 131 allele size in base pairs 543 129 129 allele size in base pairs 542 127 127 allele size in base pairs 541 125 125 allele size in base pairs 540 123 123 allele size in base pairs 539 121 121 allele size in base pairs LO000151H D6S289 D6S289 6 6p23 H. sapiens (D6S289) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 871 872 1158 1159 1160 3124 SI000111D D6S289 dinucleotide STRP null null The polymorphism is comprised of 13 observed alleles and the observed allele size ranges from 159 bp to 185 bp. PU000002C 2827 35 171 171 allele size in base pairs 34 169 169 allele size in base pairs 33 167 167 allele size in base pairs 32 165 165 allele size in base pairs 31 163 163 allele size in base pairs 30 161 161 allele size in base pairs 29 159 159 allele size in base pairs 37 175 175 allele size in base pairs 38 177 177 allele size in base pairs 36 173 173 allele size in base pairs 41 185 185 allele size in base pairs 40 183 183 allele size in base pairs 39 181 181 allele size in base pairs LO000152I D6S422 D6S422 6 6p23-p22 H. sapiens (D6S422) DNA segment containing (CA) repeat. PU000295Q PU001244L 883 884 1176 1177 1178 3125 SI000112E D6S422 dinucleotide STRP null null The polymorphism is comprised of 22 observed alleles and the observed allele size ranges from 280 bp to 320 bp. PU000002C 2828 94 298 298 allele size in base pairs 93 296 296 allele size in base pairs 92 294 294 allele size in base pairs 91 292 292 allele size in base pairs 90 290 290 allele size in base pairs 89 288 288 allele size in base pairs 88 286 286 allele size in base pairs 87 284 284 allele size in base pairs 86 282 282 allele size in base pairs 85 280 280 allele size in base pairs 97 302 302 allele size in base pairs 95 299 299 allele size in base pairs 96 300 300 allele size in base pairs 106 320 320 allele size in base pairs 105 318 318 allele size in base pairs 104 316 316 allele size in base pairs 103 314 314 allele size in base pairs 102 312 312 allele size in base pairs 101 310 310 allele size in base pairs 100 308 308 allele size in base pairs 99 306 306 allele size in base pairs 98 304 304 allele size in base pairs LO000153J D6S276 D6S276 6 6p22.3-p21.3 H. sapiens (D6S276) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 864 865 1148 1149 1150 3126 SI000113F D6S276 dinucleotide STRP null null The polymorphism is comprised of 16 observed alleles and the observed allele size ranges from 196 bp to 226 bp. PU000002C 2829 317 212 212 allele size in base pairs 324 226 226 allele size in base pairs 323 224 224 allele size in base pairs 322 222 222 allele size in base pairs 321 220 220 allele size in base pairs 320 218 218 allele size in base pairs 316 210 210 allele size in base pairs 315 208 208 allele size in base pairs 314 206 206 allele size in base pairs 313 204 204 allele size in base pairs 312 202 202 allele size in base pairs 311 200 200 allele size in base pairs 310 198 198 allele size in base pairs 309 196 196 allele size in base pairs 319 216 216 allele size in base pairs 318 214 214 allele size in base pairs LO000154K D6S426 D6S426 6 6p21 H. sapiens (D6S426) DNA segment containing (CA) repeat. PU000295Q PU001244L 885 886 1179 1180 1181 3127 SI000114G D6S426 dinucleotide STRP null null The polymorphism is comprised of 24 observed alleles and the observed allele size ranges from 189 bp to 223 bp. PU000002C 2830 65 221 221 allele size in base pairs 52 205 205 allele size in base pairs 64 219 219 allele size in base pairs 62 216 216 allele size in base pairs 61 215 215 allele size in base pairs 60 214 214 allele size in base pairs 59 213 213 allele size in base pairs 58 212 212 allele size in base pairs 57 211 211 allele size in base pairs 56 210 210 allele size in base pairs 55 209 209 allele size in base pairs 53 207 207 allele size in base pairs 66 223 223 allele size in base pairs 51 203 203 allele size in base pairs 50 201 201 allele size in base pairs 49 199 199 allele size in base pairs 48 197 197 allele size in base pairs 47 195 195 allele size in base pairs 46 193 193 allele size in base pairs 45 191 191 allele size in base pairs 44 190 190 allele size in base pairs 43 189 189 allele size in base pairs 54 208 208 allele size in base pairs 63 217 217 allele size in base pairs LO000155L D6S271 D6S271 6 6p21 H. sapiens (D6S271) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 862 863 1145 1146 1147 3128 SI000115H D6S271 dinucleotide STRP null null The polymorphism is comprised of 23 observed alleles and the observed allele size ranges from 92 bp to 136 bp. PU000002C 2831 449 100 100 allele size in base pairs 448 98 98 allele size in base pairs 447 96 96 allele size in base pairs 446 94 94 allele size in base pairs 445 92 92 allele size in base pairs 452 106 106 allele size in base pairs 464 130 130 allele size in base pairs 467 136 136 allele size in base pairs 450 102 102 allele size in base pairs 465 132 132 allele size in base pairs 451 104 104 allele size in base pairs 463 128 128 allele size in base pairs 462 126 126 allele size in base pairs 461 124 124 allele size in base pairs 460 122 122 allele size in base pairs 459 120 120 allele size in base pairs 458 118 118 allele size in base pairs 456 114 114 allele size in base pairs 455 112 112 allele size in base pairs 454 110 110 allele size in base pairs 453 108 108 allele size in base pairs 466 134 134 allele size in base pairs 457 116 116 allele size in base pairs LO000156M D6S257 D6S257 6 6p11.2-p12.3 H. sapiens (D6S257) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 855 856 1135 1136 1137 3129 SI000116I D6S257 dinucleotide STRP null null The polymorphism is comprised of 24 observed alleles and the observed allele size ranges from 149 bp to 191 bp. PU000002C 2823 2832 420 191 191 allele size in base pairs 407 165 165 allele size in base pairs 419 189 189 allele size in base pairs 418 187 187 allele size in base pairs 417 185 185 allele size in base pairs 416 183 183 allele size in base pairs 415 181 181 allele size in base pairs 414 179 179 allele size in base pairs 413 177 177 allele size in base pairs 412 175 175 allele size in base pairs 411 173 173 allele size in base pairs 410 171 171 allele size in base pairs 408 167 167 allele size in base pairs 406 164 164 allele size in base pairs 405 163 163 allele size in base pairs 404 161 161 allele size in base pairs 403 160 160 allele size in base pairs 402 159 159 allele size in base pairs 401 157 157 allele size in base pairs 400 155 155 allele size in base pairs 399 153 153 allele size in base pairs 398 151 151 allele size in base pairs 397 149 149 allele size in base pairs 409 169 169 allele size in base pairs LO000157N D6S462 D6S462 6 6q13-q14 H. sapiens (D6S462) DNA segment containing (CA) repeat. PU000295Q PU001244L 889 890 1185 1186 1187 3130 SI000117J D6S462 dinucleotide STRP null null The polymorphism is comprised of 13 observed alleles and the observed allele size ranges from 97 bp to 121 bp. PU000002C 2833 624 111 111 allele size in base pairs 623 109 109 allele size in base pairs 622 107 107 allele size in base pairs 621 105 105 allele size in base pairs 620 103 103 allele size in base pairs 619 101 101 allele size in base pairs 618 99 99 allele size in base pairs 617 97 97 allele size in base pairs 626 115 115 allele size in base pairs 627 117 117 allele size in base pairs 625 113 113 allele size in base pairs 629 121 121 allele size in base pairs 628 119 119 allele size in base pairs LO000159P D6S287 D6S287 6 6q21-q23.3 H. sapiens (D6S287) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 869 870 1154 1155 1156 1157 3131 SI000119L D6S287 dinucleotide STRP null null The polymorphism is comprised of 12 observed alleles and the observed allele size ranges from 111 bp to 133 bp. PU000002C 2834 348 111 111 allele size in base pairs 359 133 133 allele size in base pairs 358 131 131 allele size in base pairs 357 129 129 allele size in base pairs 356 127 127 allele size in base pairs 355 125 125 allele size in base pairs 354 123 123 allele size in base pairs 353 121 121 allele size in base pairs 352 119 119 allele size in base pairs 351 117 117 allele size in base pairs 349 113 113 allele size in base pairs 350 115 115 allele size in base pairs LO000160H D6S262 D6S262 6 6q22.2-q23.3 H. sapiens (D6S262) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 857 858 859 1139 1140 1141 3132 SI000120D D6S262 dinucleotide STRP null null The polymorphism is comprised of 20 observed alleles and the observed allele size ranges from 159 bp to 185 bp. PU000002C 2835 140 159 159 allele size in base pairs 152 177 177 allele size in base pairs 151 176 176 allele size in base pairs 150 175 175 allele size in base pairs 149 173 173 allele size in base pairs 148 172 172 allele size in base pairs 147 171 171 allele size in base pairs 146 169 169 allele size in base pairs 145 168 168 allele size in base pairs 144 167 167 allele size in base pairs 143 165 165 allele size in base pairs 154 180 180 allele size in base pairs 141 161 161 allele size in base pairs 155 181 181 allele size in base pairs 142 163 163 allele size in base pairs 153 179 179 allele size in base pairs 159 185 185 allele size in base pairs 158 184 184 allele size in base pairs 157 183 183 allele size in base pairs 156 182 182 allele size in base pairs LO000161I D6S292 D6S292 6 6q22-q23 H. sapiens (D6S292) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 873 874 1161 1162 1163 3133 SI000121E D6S292 dinucleotide STRP null null The polymorphism is comprised of 17 observed alleles and the observed allele size ranges from 148 bp to 178 bp. PU000002C 2836 363 152 152 allele size in base pairs 361 148 148 allele size in base pairs 364 154 154 allele size in base pairs 362 150 150 allele size in base pairs 377 178 178 allele size in base pairs 376 176 176 allele size in base pairs 375 174 174 allele size in base pairs 374 172 172 allele size in base pairs 373 170 170 allele size in base pairs 372 168 168 allele size in base pairs 371 166 166 allele size in base pairs 370 164 164 allele size in base pairs 369 162 162 allele size in base pairs 368 160 160 allele size in base pairs 367 159 159 allele size in base pairs 366 158 158 allele size in base pairs 365 156 156 allele size in base pairs LO000162J D6S308 D6S308 6 6q16.3-q27 H. sapiens (D6S308) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 877 878 1167 1168 1169 3134 SI000122F D6S308 dinucleotide STRP null null The polymorphism is comprised of 7 observed alleles and the observed allele size ranges from 330 bp to 342 bp. PU000002C 2837 346 342 342 allele size in base pairs 345 340 340 allele size in base pairs 344 338 338 allele size in base pairs 343 336 336 allele size in base pairs 342 334 334 allele size in base pairs 341 332 332 allele size in base pairs 340 330 330 allele size in base pairs LO000163K D6S441 D6S441 6 6q25 H. sapiens (D6S441) DNA segment containing (CA) repeat. PU000295Q PU001244L 887 888 1182 1183 1184 3135 SI000123G D6S441 dinucleotide STRP null null The polymorphism is comprised of 15 observed alleles and the observed allele size ranges from 162 bp to 190 bp. PU000002C 2838 565 186 186 allele size in base pairs 564 184 184 allele size in base pairs 563 182 182 allele size in base pairs 562 180 180 allele size in base pairs 561 178 178 allele size in base pairs 560 176 176 allele size in base pairs 559 174 174 allele size in base pairs 558 172 172 allele size in base pairs 557 170 170 allele size in base pairs 556 168 168 allele size in base pairs 555 166 166 allele size in base pairs 553 162 162 allele size in base pairs 554 164 164 allele size in base pairs 566 188 188 allele size in base pairs 567 190 190 allele size in base pairs LO000164L D6S305 D6S305 6 6q27 H. sapiens (D6S305) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 875 876 1164 1165 1166 3136 SI000124H D6S305 dinucleotide STRP null null The polymorphism is comprised of 16 observed alleles and the observed allele size ranges from 247 bp to 277 bp. PU000002C 2839 80 271 271 allele size in base pairs 83 277 277 allele size in base pairs 81 273 273 allele size in base pairs 79 269 269 allele size in base pairs 78 267 267 allele size in base pairs 77 265 265 allele size in base pairs 76 263 263 allele size in base pairs 75 261 261 allele size in base pairs 74 259 259 allele size in base pairs 73 257 257 allele size in base pairs 72 255 255 allele size in base pairs 71 253 253 allele size in base pairs 70 251 251 allele size in base pairs 69 249 249 allele size in base pairs 82 275 275 allele size in base pairs 68 247 247 allele size in base pairs LO000165M D6S264 D6S264 6 6q25.2-q27 H. sapiens (D6S264) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 860 861 1142 1143 1144 3137 SI000125I D6S264 dinucleotide STRP null null The polymorphism is comprised of 13 observed alleles and the observed allele size ranges from 107 bp to 131 bp. PU000002C 2840 288 119 119 allele size in base pairs 294 131 131 allele size in base pairs 293 129 129 allele size in base pairs 292 127 127 allele size in base pairs 291 125 125 allele size in base pairs 289 121 121 allele size in base pairs 287 117 117 allele size in base pairs 286 115 115 allele size in base pairs 285 113 113 allele size in base pairs 284 111 111 allele size in base pairs 283 109 109 allele size in base pairs 282 107 107 allele size in base pairs 290 123 123 allele size in base pairs LO000166N D6S281 D6S281 6 6q27 H. sapiens (D6S281) DNA segment containing (CA) repeat. PU000294P PU000295Q PU001244L 866 867 868 1151 1152 1153 3138 SI000126J D6S281 dinucleotide STRP null null The polymorphism is comprised of 15 observed alleles and the observed allele size ranges from 131 bp to 159 bp. PU000002C 2841 124 131 131 allele size in base pairs 127 137 137 allele size in base pairs 125 133 133 allele size in base pairs 138 159 159 allele size in base pairs 137 157 157 allele size in base pairs 136 155 155 allele size in base pairs 135 153 153 allele size in base pairs 134 151 151 allele size in base pairs 133 149 149 allele size in base pairs 132 147 147 allele size in base pairs 131 145 145 allele size in base pairs 130 143 143 allele size in base pairs 129 141 141 allele size in base pairs 128 139 139 allele size in base pairs 126 135 135 allele size in base pairs LO000168P Dopamine Receptor D2 DRD2 11 11q23 DRD2 encodes the dopamine D2 receptor, which plays a critical role in the functioning of many neural circuits in the human brain. The gene spans over 270 kb with a large first intron (250 kb) and maps to 11q22.3-q23.1 (Eubanks et al., 1992) [PubMed ID: 1478642]. Because of the relevance of this receptor to neurologic function, many association studies have been done to test whether a polymorphism near the gene shows different frequencies in patients and controls. The TaqI "A" polymorphism (Grandy et al., 1989) [PubMed ID: 2573278], the first polymorphism reported near this gene, is the most commonly studies; it is located ~10 kb down stream from exon 8, which is the end of the DRD2 gene (Kidd et al., 1996) [PubMed ID: 8800387]. Many other polymorphic sites, such as EcoRI, BclI, TaqI "B", TaqI "D", MboI, HincII, and SSCP at 3' untranslated region (UTR), have been reported for this locus (Iyengar et al., 1998) [PubMed ID: 10993602]. Dopamine receptors mediate enzyme activities, metabolic rates, and ion channels. They are involved in neurological signaling and may play roles in cognitive and emotional functions and neurological disorders (Sokoloff et al., 1990) [PubMed ID: 1975644]. The dopamine receptors are targets for drugs which treat schizophrenia and Parkinson disease (PD) (Scharfetter et al., 1999) [PubMed ID: 10647091]. There are five different receptors encoded by five separate genes characterized in two subgroups: one comprising the D1 and D5 receptors and the other comprising D2, D3, and D4 receptors (Jackson and Westlind-Danielsson, 1994) [PubMed ID: 7878079]. PU000007H PU000145K PU000162J PU000163K PU000172K PU000580N PU000581O PU000582P PU000767U PU000768V PU000774S 322 1609 1610 3735 SI000143I HincII Site Absent Digestion of PCR Product on primate DNA A G/C SNP that alters a HincII site located downstream of the 3' UTR, 2965 bp downstream of the termination codon and 7576 bp upstream of the TaqI "A" site. PU000163K PU001295R PU001306K 3 369 1617 3670 3724 4153 1876 HincII Site Absent 1=G 5'-gattaaaaca GTCAA G aatggtcaccggccc-3' 1877 HincII Site Present 2=C 5'-gattaaaaca GTCAA C aatggtcaccggccc-3' SI000191L 4-site haplotype (TaqI B, TaqI D, (CA) repeat, TaqI A) null null 4-site haplotype(ordered from left to right) is comprised of the following four sites: TaqI B (UID=SI000148N), TaqI D (UID=SI000139N), intron 2 (CA)n STRP (UID=SI000141G), and TaqI A (UID=SI000144J). The alleles at the three TaqI sites are represented by their letters and 1 for "site absent" or 2 for "site present". The STRP allele is represented by the number of repeats. PU000145K PU000172K 2145 B2-D2-17-A2 B2-D2-17-A2 TaqI B site present, TaqI D site present, (CA)SUB17/SUB, TaqI A site present 2144 B2-D2-17-A1 B2-D2-17-A1 TaqI B site present, TaqI D site present, (CA)SUB17/SUB, TaqI A site absent 2143 B2-D2-16-A2 B2-D2-16-A2 TaqI B site present, TaqI D site present, (CA)SUB16/SUB, TaqI A site present 2142 B2-D2-16-A1 B2-D2-16-A1 TaqI B site present, TaqI D site present, (CA)SUB16/SUB, TaqI A site absent 2141 B2-D2-15-A2 B2-D2-15-A2 TaqI B site present, TaqI D site present, (CA)SUB15/SUB, TaqI A site present 2140 B2-D2-15-A1 B2-D2-15-A1 TaqI B site present, TaqI D site present, (CA)SUB15/SUB, TaqI A site absent 2139 B2-D2-14-A2 B2-D2-14-A2 TaqI B site present, TaqI D site present, (CA)SUB14/SUB, TaqI A site present 2138 B2-D2-14-A1 B2-D2-14-A1 TaqI B site present, TaqI D site present, (CA)SUB14/SUB, TaqI A site absent 2137 B2-D2-13-A2 B2-D2-13-A2 TaqI B site present, TaqI D site present, (CA)SUB13/SUB, TaqI A site present 2136 B2-D2-13-A1 B2-D2-13-A1 TaqI B site present, TaqI D site present, (CA)SUB13/SUB, TaqI A site absent 2135 B2-D2-12-A2 B2-D2-12-A2 TaqI B site present, TaqI D site present, (CA)SUB12/SUB, TaqI A site present 2134 B2-D2-12-A1 B2-D2-12-A1 TaqI B site present, TaqI D site present, (CA)SUB12/SUB, TaqI A site absent 2133 B2-D1-17-A2 B2-D1-17-A2 TaqI B site present, TaqI D site absent, (CA)SUB17/SUB, TaqI A site present 2132 B2-D1-17-A1 B2-D1-17-A1 TaqI B site present, TaqI D site absent, (CA)SUB17/SUB, TaqI A site absent 2131 B2-D1-16-A2 B2-D1-16-A2 TaqI B site present, TaqI D site absent, (CA)SUB16/SUB, TaqI A site present 2130 B2-D1-16-A1 B2-D1-16-A1 TaqI B site present, TaqI D site absent, (CA)SUB16/SUB, TaqI A site absent 2129 B2-D1-15-A2 B2-D1-15-A2 TaqI B site present, TaqI D site absent, (CA)SUB15/SUB, TaqI A site present 2128 B2-D1-15-A1 B2-D1-15-A1 TaqI B site present, TaqI D site absent, (CA)SUB15/SUB, TaqI A site absent 2127 B2-D1-14-A2 B2-D1-14-A2 TaqI B site present, TaqI D site absent, (CA)SUB14/SUB, TaqI A site present 2126 B2-D1-14-A1 B2-D1-14-A1 TaqI B site present, TaqI D site absent, (CA)SUB14/SUB, TaqI A site absent 2125 B2-D1-13-A2 B2-D1-13-A2 TaqI B site present, TaqI D site absent, (CA)SUB13/SUB, TaqI A site present 2124 B2-D1-13-A1 B2-D1-13-A1 TaqI B site present, TaqI D site absent, (CA)SUB13/SUB, TaqI A site absent 2123 B2-D1-12-A2 B2-D1-12-A2 TaqI B site present, TaqI D site absent, (CA)SUB12/SUB, TaqI A site present 2122 B2-D1-12-A1 B2-D1-12-A1 TaqI B site present, TaqI D site absent, (CA)SUB12/SUB, TaqI A site absent 2121 B1-D2-17-A2 B1-D2-17-A2 TaqI B site absent, TaqI D site present, (CA)SUB17/SUB, TaqI A site present 2120 B1-D2-17-A1 B1-D2-17-A1 TaqI B site absent, TaqI D site present, (CA)SUB17/SUB, TaqI A site absent 2119 B1-D2-16-A2 B1-D2-16-A2 TaqI B site absent, TaqI D site present, (CA)SUB16/SUB, TaqI A site present 2118 B1-D2-16-A1 B1-D2-16-A1 TaqI B site absent, TaqI D site present, (CA)SUB16/SUB, TaqI A site absent 2117 B1-D2-15-A2 B1-D2-15-A2 TaqI B site absent, TaqI D site present, (CA)SUB15/SUB, TaqI A site present 2116 B1-D2-15-A1 B1-D2-15-A1 TaqI B site absent, TaqI D site present, (CA)SUB15/SUB, TaqI A site absent 2115 B1-D2-14-A2 B1-D2-14-A2 TaqI B site absent, TaqI D site present, (CA)SUB14/SUB, TaqI A site present 2114 B1-D2-14-A1 B1-D2-14-A1 TaqI B site absent, TaqI D site present, (CA)SUB14/SUB, TaqI A site absent 2113 B1-D2-13-A2 B1-D2-13-A2 TaqI B site absent, TaqI D site present, (CA)SUB13/SUB, TaqI A site present 2112 B1-D2-13-A1 B1-D2-13-A1 TaqI B site absent, TaqI D site present, (CA)SUB13/SUB, TaqI A site absent 2111 B1-D2-12-A2 B1-D2-12-A2 TaqI B site absent, TaqI D site present, (CA)SUB12/SUB, TaqI A site present 2110 B1-D2-12-A1 B1-D2-12-A1 TaqI B site absent, TaqI D site present, (CA)SUB12/SUB, TaqI A site absent 2109 B1-D1-17-A2 B1-D1-17-A2 TaqI B site absent, TaqI D site absent, (CA)SUB17/SUB, TaqI A site present 2108 B1-D1-17-A1 B1-D1-17-A1 TaqI B site absent, TaqI D site absent, (CA)SUB17/SUB, TaqI A site absent 2107 B1-D1-16-A2 B1-D1-16-A2 TaqI B site absent, TaqI D site absent, (CA)SUB16/SUB, TaqI A site present 2106 B1-D1-16-A1 B1-D1-16-A1 TaqI B site absent, TaqI D site absent, (CA)SUB16/SUB, TaqI A site absent 2105 B1-D1-15-A2 B1-D1-15-A2 TaqI B site absent, TaqI D site absent, (CA)SUB15/SUB, TaqI A site present 2104 B1-D1-15-A1 B1-D1-15-A1 TaqI B site absent, TaqI D site absent, (CA)SUB15/SUB, TaqI A site absent 2102 B1-D1-14-A1 B1-D1-14-A1 TaqI B site absent, TaqI D site absent, (CA)SUB14/SUB, TaqI A site absent 2101 B1-D1-13-A2 B1-D1-13-A2 TaqI B site absent, TaqI D site absent, (CA)SUB13/SUB, TaqI A site present 2100 B1-D1-13-A1 B1-D1-13-A1 TaqI B site absent, TaqI D site absent, (CA)SUB13/SUB, TaqI A site absent 2099 B1-D1-12-A2 B1-D1-12-A2 TaqI B site absent, TaqI D site absent, (CA)SUB12/SUB, TaqI A site present 2098 B1-D1-12-A1 B1-D1-12-A1 TaqI B site absent, TaqI D site absent, (CA)SUB12/SUB, TaqI A site absent 2103 B1-D1-14-A2 B1-D1-14-A2 TaqI B site absent, TaqI D site absent, (CA)SUB14/SUB, TaqI A site present SI000134I 5' (GAAA)SUBn/SUB tetranucleotide STRP null null An STRP that ends in the 661 bp upstream of exon 1. Alleles are coded as the number of repetitions of the GAAA tetranucleotide. The varying region is flanked by some constant irregular repeats. PU000002C 3734 1840 9 9 9 regular (GAAA) repeats 1836 8 8 8 regular (GAAA) repeats 1837 7 7 7 regular (GAAA) repeats 1838 18 18 18 regular (GAAA) repeats 1839 17 17 17 regular (GAAA) repeats 1845 16 16 16 regular (GAAA) repeats 1846 15 15 15 regular (GAAA) repeats 1835 14 14 14 regular (GAAA) repeats 1841 13 13 13 regular (GAAA) repeats 1842 12 12 12 regular (GAAA) repeats 1843 11 11 11 regular (GAAA) repeats 1844 10 10 10 regular (GAAA) repeats SI000146L intron 2 MboI Site Absent Sequence on primate DNA A A/T SNP altering a MboI restriction site. This polymorphism is in intron 2 located 2896 bp upstream of exon 3 and 160 bp upstream of the TaqI "D" site. PU000163K PU001306K 1699 1700 1701 1702 3670 3723 3733 1883 MboI Site Present 2=T 5'-catcaagtgtttg GA T C agtgcctgacacatg-3' 1882 MboI Site Absent 1=A 5'-catcaagtgtttg GA A C agtgcctgacacatg-3' SI000254L 5-site haplotype (TaqI B, TaqI D, (GT) STRP, HincII, TaqI A) null null 5-site haplotype(ordered from left to right) is comprised of the following five sites: TaqI B (UID=SI000148N), TaqI D (UID=SI000139N), intron 2 (GT)SUBn/SUB STRP (UID=SI000141G), HincII (UID=SI000143I), and TaqI A (UID=SI000144J). Haplotype symbols indicate the alleles at each site in this same order as defined for each individual site. PU000002C 2982 B2-D2-15-H1-A2 B2-D2-15-H1-A2 TaqI B site present, TaqI D site present, (GT)SUB15/SUB, HincII site absent, TaqI A site present 2981 B2-D2-15-H1-A1 B2-D2-15-H1-A1 TaqI B site present, TaqI D site present, (GT)SUB15/SUB, HincII site absent, TaqI A site absent 2980 B2-D2-14-H2-A2 B2-D2-14-H2-A2 TaqI B site present, TaqI D site present, (GT)SUB14/SUB, HincII site present, TaqI A site present 2979 B2-D2-14-H2-A1 B2-D2-14-H2-A1 TaqI B site present, TaqI D site present, (GT)SUB14/SUB, HincII site present, TaqI A site absent 2978 B2-D2-14-H1-A2 B2-D2-14-H1-A2 TaqI B site present, TaqI D site present, (GT)SUB14/SUB, HincII site absent, TaqI A site present 2977 B2-D2-14-H1-A1 B2-D2-14-H1-A1 TaqI B site present, TaqI D site present, (GT)SUB14/SUB, HincII site absent, TaqI A site absent 2976 B2-D2-13-H2-A2 B2-D2-13-H2-A2 TaqI B site present, TaqI D site present, (GT)SUB13/SUB, HincII site present, TaqI A site present 2975 B2-D2-13-H2-A1 B2-D2-13-H2-A1 TaqI B site present, TaqI D site present, (GT)SUB13/SUB, HincII site present, TaqI A site absent 2974 B2-D2-13-H1-A2 B2-D2-13-H1-A2 TaqI B site present, TaqI D site present, (GT)SUB13/SUB, HincII site absent, TaqI A site present 2973 B2-D2-13-H1-A1 B2-D2-13-H1-A1 TaqI B site present, TaqI D site present, (GT)SUB13/SUB, HincII site absent, TaqI A site absent 2972 B2-D2-12-H2-A2 B2-D2-12-H2-A2 TaqI B site present, TaqI D site present, (GT)SUB12/SUB, HincII site present, TaqI A site present 2971 B2-D2-12-H2-A1 B2-D2-12-H2-A1 TaqI B site present, TaqI D site present, (GT)SUB12/SUB, HincII site present, TaqI A site absent 2970 B2-D2-12-H1-A2 B2-D2-12-H1-A2 TaqI B site present, TaqI D site present, (GT)SUB12/SUB, HincII site absent, TaqI A site present 2969 B2-D2-12-H1-A1 B2-D2-12-H1-A1 TaqI B site present, TaqI D site present, (GT)SUB12/SUB, HincII site absent, TaqI A site absent 2968 B2-D1-17-H2-A2 B2-D1-17-H2-A2 TaqI B site present, TaqI D site absent, (GT)SUB17/SUB, HincII site present, TaqI A site present 2967 B2-D1-17-H2-A1 B2-D1-17-H2-A1 TaqI B site present, TaqI D site absent, (GT)SUB17/SUB, HincII site present, TaqI A site absent 2966 B2-D1-17-H1-A2 B2-D1-17-H1-A2 TaqI B site present, TaqI D site absent, (GT)SUB17/SUB, HincII site absent, TaqI A site present 2965 B2-D1-17-H1-A1 B2-D1-17-H1-A1 TaqI B site present, TaqI D site absent, (GT)SUB17/SUB, HincII site absent, TaqI A site absent 2964 B2-D1-16-H2-A2 B2-D1-16-H2-A2 TaqI B site present, TaqI D site absent, (GT)SUB16/SUB, HincII site present, TaqI A site present 2963 B2-D1-16-H2-A1 B2-D1-16-H2-A1 TaqI B site present, TaqI D site absent, (GT)SUB16/SUB, HincII site present, TaqI A site absent 2962 B2-D1-16-H1-A2 B2-D1-16-H1-A2 TaqI B site present, TaqI D site absent, (GT)SUB16/SUB, HincII site absent, TaqI A site present 2961 B2-D1-16-H1-A1 B2-D1-16-H1-A1 TaqI B site present, TaqI D site absent, (GT)SUB16/SUB, HincII site absent, TaqI A site absent 2960 B2-D1-15-H2-A2 B2-D1-15-H2-A2 TaqI B site present, TaqI D site absent, (GT)SUB15/SUB, HincII site present, TaqI A site present 2959 B2-D1-15-H2-A1 B2-D1-15-H2-A1 TaqI B site present, TaqI D site absent, (GT)SUB15/SUB, HincII site present, TaqI A site absent 2958 B2-D1-15-H1-A2 B2-D1-15-H1-A2 TaqI B site present, TaqI D site absent, (GT)SUB15/SUB, HincII site absent, TaqI A site present 2957 B2-D1-15-H1-A1 B2-D1-15-H1-A1 TaqI B site present, TaqI D site absent, (GT)SUB15/SUB, HincII site absent, TaqI A site absent 2956 B2-D1-14-H2-A2 B2-D1-14-H2-A2 TaqI B site present, TaqI D site absent, (GT)SUB14/SUB, HincII site present, TaqI A site present 2955 B2-D1-14-H2-A1 B2-D1-14-H2-A1 TaqI B site present, TaqI D site absent, (GT)SUB14/SUB, HincII site present, TaqI A site absent 2954 B2-D1-14-H1-A2 B2-D1-14-H1-A2 TaqI B site present, TaqI D site absent, (GT)SUB14/SUB, HincII site absent, TaqI A site present 2953 B2-D1-14-H1-A1 B2-D1-14-H1-A1 TaqI B site present, TaqI D site absent, (GT)SUB14/SUB, HincII site absent, TaqI A site absent 2952 B2-D1-13-H2-A2 B2-D1-13-H2-A2 TaqI B site present, TaqI D site absent, (GT)SUB13/SUB, HincII site present, TaqI A site present 2951 B2-D1-13-H2-A1 B2-D1-13-H2-A1 TaqI B site present, TaqI D site absent, (GT)SUB13/SUB, HincII site present, TaqI A site absent 2950 B2-D1-13-H1-A2 B2-D1-13-H1-A2 TaqI B site present, TaqI D site absent, (GT)SUB13/SUB, HincII site absent, TaqI A site present 2949 B2-D1-13-H1-A1 B2-D1-13-H1-A1 TaqI B site present, TaqI D site absent, (GT)SUB13/SUB, HincII site absent, TaqI A site absent 2948 B2-D1-12-H2-A2 B2-D1-12-H2-A2 TaqI B site present, TaqI D site absent, (GT)SUB12/SUB, HincII site present, TaqI A site present 2947 B2-D1-12-H2-A1 B2-D1-12-H2-A1 TaqI B site present, TaqI D site absent, (GT)SUB12/SUB, HincII site present, TaqI A site absent 2946 B2-D1-12-H1-A2 B2-D1-12-H1-A2 TaqI B site present, TaqI D site absent, (GT)SUB12/SUB, HincII site absent, TaqI A site present 2945 B2-D1-12-H1-A1 B2-D1-12-H1-A1 TaqI B site present, TaqI D site absent, (GT)SUB12/SUB, HincII site absent, TaqI A site absent 2944 B1-D2-17-H2-A2 B1-D2-17-H2-A2 TaqI B site absent, TaqI D site present, (GT)SUB17/SUB, HincII site present, TaqI A site present 2943 B1-D2-17-H2-A1 B1-D2-17-H2-A1 TaqI B site absent, TaqI D site present, (GT)SUB17/SUB, HincII site present, TaqI A site absent 2983 B2-D2-15-H2-A1 B2-D2-15-H2-A1 TaqI B site present, TaqI D site present, (GT)SUB15/SUB, HincII site present, TaqI A site absent 2941 B1-D2-17-H1-A1 B1-D2-17-H1-A1 TaqI B site absent, TaqI D site present, (GT)SUB17/SUB, HincII site absent, TaqI A site absent 2940 B1-D2-16-H2-A2 B1-D2-16-H2-A2 TaqI B site absent, TaqI D site present, (GT)SUB16/SUB, HincII site present, TaqI A site present 2939 B1-D2-16-H2-A1 B1-D2-16-H2-A1 TaqI B site absent, TaqI D site present, (GT)SUB16/SUB, HincII site present, TaqI A site absent 2938 B1-D2-16-H1-A2 B1-D2-16-H1-A2 TaqI B site absent, TaqI D site present, (GT)SUB16/SUB, HincII site absent, TaqI A site present 2937 B1-D2-16-H1-A1 B1-D2-16-H1-A1 TaqI B site absent, TaqI D site present, (GT)SUB16/SUB, HincII site absent, TaqI A site absent 2936 B1-D2-15-H2-A2 B1-D2-15-H2-A2 TaqI B site absent, TaqI D site present, (GT)SUB15/SUB, HincII site present, TaqI A site present 2935 B1-D2-15-H2-A1 B1-D2-15-H2-A1 TaqI B site absent, TaqI D site present, (GT)SUB15/SUB, HincII site present, TaqI A site absent 2934 B1-D2-15-H1-A2 B1-D2-15-H1-A2 TaqI B site absent, TaqI D site present, (GT)SUB15/SUB, HincII site absent, TaqI A site present 2933 B1-D2-15-H1-A1 B1-D2-15-H1-A1 TaqI B site absent, TaqI D site present, (GT)SUB15/SUB, HincII site absent, TaqI A site absent 2932 B1-D2-14-H2-A2 B1-D2-14-H2-A2 TaqI B site absent, TaqI D site present, (GT)SUB14/SUB, HincII site present, TaqI A site present 2931 B1-D2-14-H2-A1 B1-D2-14-H2-A1 TaqI B site absent, TaqI D site present, (GT)SUB14/SUB, HincII site present, TaqI A site absent 2930 B1-D2-14-H1-A2 B1-D2-14-H1-A2 TaqI B site absent, TaqI D site present, (GT)SUB14/SUB, HincII site absent, TaqI A site present 2929 B1-D2-14-H1-A1 B1-D2-14-H1-A1 TaqI B site absent, TaqI D site present, (GT)SUB14/SUB, HincII site absent, TaqI A site absent 2928 B1-D2-13-H2-A2 B1-D2-13-H2-A2 TaqI B site absent, TaqI D site present, (GT)SUB13/SUB, HincII site present, TaqI A site present 2927 B1-D2-13-H2-A1 B1-D2-13-H2-A1 TaqI B site absent, TaqI D site present, (GT)SUB13/SUB, HincII site present, TaqI A site absent 2926 B1-D2-13-H1-A2 B1-D2-13-H1-A2 TaqI B site absent, TaqI D site present, (GT)SUB13/SUB, HincII site absent, TaqI A site present 2925 B1-D2-13-H1-A1 B1-D2-13-H1-A1 TaqI B site absent, TaqI D site present, (GT)SUB13/SUB, HincII site absent, TaqI A site absent 2924 B1-D2-12-H2-A2 B1-D2-12-H2-A2 TaqI B site absent, TaqI D site present, (GT)SUB12/SUB, HincII site present, TaqI A site present 2923 B1-D2-12-H2-A1 B1-D2-12-H2-A1 TaqI B site absent, TaqI D site present, (GT)SUB12/SUB, HincII site present, TaqI A site absent 2922 B1-D2-12-H1-A2 B1-D2-12-H1-A2 TaqI B site absent, TaqI D site present, (GT)SUB12/SUB, HincII site absent, TaqI A site present 2921 B1-D2-12-H1-A1 B1-D2-12-H1-A1 TaqI B site absent, TaqI D site present, (GT)SUB12/SUB, HincII site absent, TaqI A site absent 2920 B1-D1-17-H2-A2 B1-D1-17-H2-A2 TaqI B site absent, TaqI D site absent, (GT)SUB17/SUB, HincII site present, TaqI A site present 2919 B1-D1-17-H2-A1 B1-D1-17-H2-A1 TaqI B site absent, TaqI D site absent, (GT)SUB17/SUB, HincII site present, TaqI A site absent 2918 B1-D1-17-H1-A2 B1-D1-17-H1-A2 TaqI B site absent, TaqI D site absent, (GT)SUB17/SUB, HincII site absent, TaqI A site present 2917 B1-D1-17-H1-A1 B1-D1-17-H1-A1 TaqI B site absent, TaqI D site absent, (GT)SUB17/SUB, HincII site absent, TaqI A site absent 2916 B1-D1-16-H2-A2 B1-D1-16-H2-A2 TaqI B site absent, TaqI D site absent, (GT)SUB16/SUB, HincII site present, TaqI A site present 2915 B1-D1-16-H2-A1 B1-D1-16-H2-A1 TaqI B site absent, TaqI D site absent, (GT)SUB16/SUB, HincII site present, TaqI A site absent 2914 B1-D1-16-H1-A2 B1-D1-16-H1-A2 TaqI B site absent, TaqI D site absent, (GT)SUB16/SUB, HincII site absent, TaqI A site present 2913 B1-D1-16-H1-A1 B1-D1-16-H1-A1 TaqI B site absent, TaqI D site absent, (GT)SUB16/SUB, HincII site absent, TaqI A site absent 2912 B1-D1-15-H2-A2 B1-D1-15-H2-A2 TaqI B site absent, TaqI D site absent, (GT)SUB15/SUB, HincII site present, TaqI A site present 2911 B1-D1-15-H2-A1 B1-D1-15-H2-A1 TaqI B site absent, TaqI D site absent, (GT)SUB15/SUB, HincII site present, TaqI A site absent 2910 B1-D1-15-H1-A2 B1-D1-15-H1-A2 TaqI B site absent, TaqI D site absent, (GT)SUB15/SUB, HincII site absent, TaqI A site present 2909 B1-D1-15-H1-A1 B1-D1-15-H1-A1 TaqI B site absent, TaqI D site absent, (GT)SUB15/SUB, HincII site absent, TaqI A site absent 2908 B1-D1-14-H2-A2 B1-D1-14-H2-A2 TaqI B site absent, TaqI D site absent, (GT)SUB14/SUB, HincII site present, TaqI A site present 2907 B1-D1-14-H2-A1 B1-D1-14-H2-A1 TaqI B site absent, TaqI D site absent, (GT)SUB14/SUB, HincII site present, TaqI A site absent 2906 B1-D1-14-H1-A2 B1-D1-14-H1-A2 TaqI B site absent, TaqI D site absent, (GT)SUB14/SUB, HincII site absent, TaqI A site present 2905 B1-D1-14-H1-A1 B1-D1-14-H1-A1 TaqI B site absent, TaqI D site absent, (GT)SUB14/SUB, HincII site absent, TaqI A site absent 2904 B1-D1-13-H2-A2 B1-D1-13-H2-A2 TaqI B site absent, TaqI D site absent, (GT)SUB13/SUB, HincII site present, TaqI A site present 2903 B1-D1-13-H2-A1 B1-D1-13-H2-A1 TaqI B site absent, TaqI D site absent, (GT)SUB13/SUB, HincII site present, TaqI A site absent 2902 B1-D1-13-H1-A2 B1-D1-13-H1-A2 TaqI B site absent, TaqI D site absent, (GT)SUB13/SUB, HincII site absent, TaqI A site present 2901 B1-D1-13-H1-A1 B1-D1-13-H1-A1 TaqI B site absent, TaqI D site absent, (GT)SUB13/SUB, HincII site abesent, TaqI A site abesent 2942 B1-D2-17-H1-A2 B1-D2-17-H1-A2 TaqI B site absent, TaqI D site present, (GT)SUB17/SUB, HincII site absent, TaqI A site present 2899 B1-D1-12-H2-A1 B1-D1-12-H2-A1 TaqI B site absent, TaqI D site absent, (GT)SUB12/SUB, HincII site present, TaqI A site absent 2898 B1-D1-12-H1-A2 B1-D1-12-H1-A2 TaqI B site absent, TaqI D site absent, (GT)SUB12/SUB, HincII site absent, TaqI A site present 2897 B1-D1-12-H1-A1 B1-D1-12-H1-A1 TaqI B site absent, TaqI D site absent, (GT)SUB12/SUB, HincII site absent, TaqI A site absent 2992 B2-D2-17-H2-A2 B2-D2-17-H2-A2 TaqI B site present, TaqI D site present, (GT)SUB17/SUB, HincII site present, TaqI A site present 2991 B2-D2-17-H2-A1 B2-D2-17-H2-A1 TaqI B site present, TaqI D site present, (GT)SUB17/SUB, HincII site present, TaqI A site absent 2990 B2-D2-17-H1-A2 B2-D2-17-H1-A2 TaqI B site present, TaqI D site present, (GT)SUB17/SUB, HincII site absent, TaqI A site present 2989 B2-D2-17-H1-A1 B2-D2-17-H1-A1 TaqI B site present, TaqI D site present, (GT)SUB17/SUB, HincII site absent, TaqI A site absent 2988 B2-D2-16-H2-A2 B2-D2-16-H2-A2 TaqI B site present, TaqI D site present, (GT)SUB16/SUB, HincII site present, TaqI A site present 2987 B2-D2-16-H2-A1 B2-D2-16-H2-A1 TaqI B site present, TaqI D site present, (GT)SUB16/SUB, HincII site present, TaqI A site absent 2986 B2-D2-16-H1-A2 B2-D2-16-H1-A2 TaqI B site present, TaqI D site present, (GT)SUB16/SUB, HincII site absent, TaqI A site present 2985 B2-D2-16-H1-A1 B2-D2-16-H1-A1 TaqI B site present, TaqI D site present, (GT)SUB16/SUB, HincII site absent, TaqI A site absent 2984 B2-D2-15-H2-A2 B2-D2-15-H2-A2 TaqI B site present, TaqI D site present, (GT)SUB15/SUB, HincII site present, TaqI A site present 2900 B1-D1-12-H2-A2 B1-D1-12-H2-A2 TaqI B site absent, TaqI D site absent, (GT)SUB12/SUB, HincII site present, TaqI A site present SI000135J -141 C Ins/Del Insertion Based on sequencing at least one individual each of chimp, gorilla, bonobo, orangutan, all of whom had the additional C. A single nucleotide insertion/deletion polymorphism at -141 bp, i.e. upstream, of the start of transcription.The "insertion" allele corresponds to a BstNI restriction site; the "deletion" allele does not have that site. For the PCR protocol given, the fragment amplified is 284 bp. When the site is absent (deletion) the product is uncut, when present (insertion) two fragments of 131 bp and 133 bp result when digested with BstNI. PU001309N 324 5251 1848 Insertion + BstNI site present:5'-tcctacccgtt C C AGG ccgggga-3' 1847 Deletion - BstNI site absent:5'-tcctacccgtt CAGG ccgggga-3' SI000138M exon 7 Ser311Cys null null A SNP (C-G) in exon 7 altering the codon 311 from the more common Ser to the less common Cys. The Cys311 variant has decreased affinity for dopamine (Cravchik et al. 1996, JBC u271/u:26013-26017). PU000794U 282 5272 1853 Codon 311 Cys C 5'-ccccgacccg T G C caccatggtc-3' 1854 Codon 311 Ser S 5'-ccccgacccg T C C caccatggtc-3' SI000139N intron 2 TaqI D Site Present Sequence on primate DNA A T/C SNP in intron 2 that alters a TaqI restriction site. The SNP is located between the MboI RSP and the (GT)SUBn/SUB STRP: 160 bp downstream of the MboI SNP and 1.396 kb upstream of the STRP. With the protocol given, the PCR fragment is 300 bp which remains uncut by TaqI for the D1 allele (site absent) and is cut into fragments of 212 bp and 88 bp for the D2 allele (site present). The MboI site is also within this PCR amplicon. PU000145K PU000163K PU001295R PU001306K PU001317M 2 285 372 1693 1700 1701 1702 3670 4154 1855 Taq Site Absent D1=T 5'-aaaagagccttgggtt T T GA gactagggaacctggg-3' 1856 TaqI Site Present D2=C 5'-aaaagagccttgggtt T C GA gactagggaacctggg-3' SI000141G intron 2 (GT)SUBn/SUB dinucleotide STRP null null An intron 2 dinucleotide STRP with a relatively simple repeat structure varying (within humans) in the dinucleotide repeat domain. The STRP is located 1311 bp upstream of exon 3 and 1384 downstream of the TaqI "D" site. Alleles are given according to the number of repeated units. PU000007H PU000774S PU000795V 286 1616 3731 1859 17 17 17 Repeats 1860 16 16 16 Repeats 1861 15 15 15 Repeats 1862 14 14 14 Repeats 1863 13 13 13 Repeats 1864 12 12 12 Repeats SI000144J TaqI A Site Absent Digestion of PCR Product on primate DNA A T/C SNP altering a TaqI restriction site located 10541 bp downstream of the termination codon. PU000145K PU001295R PU001306K PU001317M 4 283 370 1692 3670 4155 1878 TaqI Site Absent A1=T 5'-gctgggcgcctgcc T T GA ccagcacttt-3' 1879 TaqI Site Present A2=C 5'-gctgggcgcctgcc T C GA ccagcacttt-3' SI000148N intron 1 TaqI B Site Present Sequence on primate DNA A A/G SNP in intron 1 that alters a TaqI site located 882 bp upstream of exon 2 and 12 bp upstream of the polymorphic BclI site. PU000007H PU000145K PU000163K PU001295R PU001306K PU001317M 5 284 371 1618 1705 1706 1707 3670 4156 1886 TaqI Site Present B2=G 5'-tcagaatcacctat TC G A aaggcgaatccgatc-3' 1887 TaqI Site Absent B1=A 5'-tcagaatcacctat TC A A aaggcgaatccgatc-3' SI000137L EcoRI Site Absent Digestion of PCR Product on primate DNA A SNP altering an EcoRI site located 7021 bp upstream of exon 2. PU000163K PU000172K 1615 1851 EcoRI Site Absent 1=C 5'-accttgat G C ATTC tagacc tctgattggg-3' 1852 EcoRI Site Present 2=A 5'-accttgat G A ATTC tagacc tctgattggg-3' SI000140F intron 1 BclI Site Present Sequence on primate DNA An intron 1 SNP, 870 bp upstream of exon 2 and only 12 bp downstream of the TaqI "B" site, that alters a BclI site. PU000007H PU000163K PU001306K 1695 1696 1697 1698 3729 5217 1858 BclI Site Present 2=T 5'-tcaaaaggcgaatc T GATCA tgtggttcct-3' 1857 BclI Site Absent 1=C 5'-tcaaaaggcgaatc C GATCA tgtggttcct-3' SI000142H intron 1 (CT)SUBn/SUB dinucleotide STRP null null A dinucleotide STRP located in intron 1. The site is 7608 bp upstream of exon 2. The alleles are given as fragment sizes for the PCR primers and protocol given. The sequence on the transcribed strand is (GT)subn/sub. PU000002C 287 3732 1871 120 120 PCR fragment size 1872 118 118 PCR fragment size 1873 116 116 PCR fragment size 1874 114 114 PCR fragment size 1875 132 132 PCR fragment size 1868 126 126 PCR fragment size 1866 112 112 PCR fragment size 1867 130 130 PCR fragment size 1870 122 122 PCR fragment size 1865 128 128 PCR fragment size 1869 124 124 PCR fragment size SI000757T intron 1 T/C null null A T/C SNP is located in intron 1 of DRD2. PU001306K 3670 4059 6584 T T 5'-caggatgctggagcct T ccagtttctctggct-3' 6585 C C 5'-caggatgctggagcct C ccagtttctctggct-3' SI000797X HGVbase_SNP000002593 (5' MaeIII ) null null A G/A SNP altering a MaeIII restriction site. This polymorphism is located at 241 base upstream of the start condon of DRD2. PU001306K PU001309N 3670 3722 4111 6582 MaeIII site absent 1=A 5'-gcctgcaatcacagctt A TTAC tctgggtgtggg-3' 6583 MaeIII site present 2=G 5'-gcctgcaatcacagctt G TTAC tctgggtgtggg-3' SI000758U intron 1 BslI null null A G/A SNP altering a BslI restriction site. This polymorphism was found by resequencing PCR products from ethnically diverse individuals. It is located 17126 bp upstream of the TaqI B SNP. PU001306K 3670 3730 4060 6586 BslI Site Absent 1=A 5'-atggaa CCTTTAGGG A G agagatttgtgttt-3' 6587 BslI Site Present 2=G 5'-atggaa CCTTTAGGG G G agagatttgtgttt-3' SI000807P 3-site haplotype (TaqI B, TaqI D, TaqI A) null null 3-site haplotype(ordered from left to right) is comprised of TaqI B a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI000148N"(UID=SI000148N)/a, TaqI D a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI000139N"(UID=SI000139N)/a, and TaqI A a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI000144J"(UID=SI000144J)/a sites. The alleles are designed as "-" for site absent and "+" for site present. PU001317M 6708 +/+/+ +/+/+ null 6709 +/+/- +/+/- null 6710 +/-/+ +/-/+ null 6711 +/-/- +/-/- null 6712 -/+/+ -/+/+ null 6713 -/+/- -/+/- null 6714 -/-/+ -/-/+ null 6715 -/-/- -/-/- null SI000896X C____326647_1_ exon 8 C/G SNP null null C____326647_1_ is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID.This is C/G SNP located in exon 8 of the gene DRD2. PU000002C 4230 4231 4235 7221 C C 5'-cctgctccacgccaagccccacaaa C agaaaactcagcctctgggccctga-3' 7222 G G 5'-cctgctccacgccaagccccacaaa G agaaaactcagcctctgggccctga-3' SI000897Y C____343603_10 null null C____343603_10 is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is A/G SNP. PU000002C 4230 4231 5312 7223 A A 5'-ctgagaactgagaaaaggccttgaa A aaaagagttagaaaaagtagatgaa-3' 7224 G G 5'-ctgagaactgagaaaaggccttgaa G aaaagagttagaaaaagtagatgaa-3' SI001200D 2-site haplotype (Ser311Cys, -141C Ins/Del) null null This 2-site haplotype(ordered from left to right) is comprised of the Ser311Cys a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI000138M"(UID=SI000138M)/a and -141C Ins/Del a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI000135J"(UID=SI000135J)/a sites. PU001752P 8902 Ser - Ins S - (+) Codon 311 Ser, (-141)C Insertion 8903 Ser - Del S - (-) Codon 311 Ser, (-141)C Deletion 8904 Cys - Ins C - (+) Codon 311 Cys, (-141)C Insertion 8905 Cys - Del C - (-) Codon 311 Cys, (-141)C Deletion SI001208L 2-site haplotype (TaqI A, TaqI B) null null This 2-site haplotype(ordered from left to right) is comprised of the TaqI A a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI000144J"(UID=SI000144J)/a and TaqI B a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI000148N"(UID=SI000148N)/a sites. PU001750N 8906 A1-B1 A1-B1 TaqI A site absent, TaqI B site absent 8907 A1-B2 A1-B2 TaqI A site absent, TaqI B site present 8908 A2-B1 A2-B1 TaqI A site present, TaqI B site absent 8909 A2-B2 A2-B2 TaqI A site present, TaqI B site present SI001209M Exon 6 NcoI null null The NcoI polymorphism is a silent C/T transition (His313His) located in exon 6 of DRD2. The NcoI restriction site is present in the T allele. The C allele has been recognized as a risk factor for transformed migraine headache and observed as more frequent in individuals having anxiety and major depression. PU001759W 5612 8915 NcoI site absent N1=C 5'-tgactctccccgacccgtcccacca C ggtctccacagcactcccgacagcc-3' 8916 NcoI site present N2=T 5'-tgactctccccgacccgtcccacca T ggtctccacagcactcccgacagcc-3' SI001210E 2-site haplotype (Exon 6 NcoI, TaqI A) null null This 2-site haplotype(ordered from left to right) is comprised of the TaqI A a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI000144J"(SI000144J)/a and Exon 6 NcoI a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI001209M"(SI001209M)/a sites. PU001761P 8917 A1-N1 A1-N1 TaqI A site absent, NcoI site absent 8918 A1-N2 A1-N2 TaqI A site absent, NcoI site present 8919 A2-N1 A2-N1 TaqI A site present, NcoI site absent 8920 A2-N2 A2-N2 TaqI A site present, NcoI site present SI001230G intron 4 C/T null null This C/T SNP is located in intron 4 of DRD2. PU001962S 5859 9317 C C 5'-gcctggtcatcttagatataCacaaacgcacagcagatacc-3' 9318 T T 5'-gcctggtcatcttagatataTacaaacgcacagcagatacc-3' SI001231H intron 4 A/G null null This A/G SNP is located in intron 4 of DRD2. PU001962S 5861 9319 A A 5'-ttagatatacacaaacgcacAgcagataccagagtattaaa-3' 9320 G G 5'-ttagatatacacaaacgcacGgcagataccagagtattaaa-3' SI001233J exon 8 HpaII RFLP null null This Hpall restriction site is an A/G SNP located in exon 8 of DRD2. PU001965V 5864 9323 A A 5'-cccacctccctgcccaggccAgccagccntcacccttgcga-3' 9324 G G 5'-cccacctccctgcccaggccGgccagccntcacccttgcga-3' SI001303H C___7486661_1_ null null C___7486661_1_ is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is A/C SNP located in the intron region of the DRD2 gene. 5975 9515 A A 5?- tcaggtgcactttttccaggacctc A tgcacaggtgtgatatttag -3? 9516 C C 5?- tcaggtgcactttttccaggacctc C tgcacaggtgtgatatttag -3? SI001304I C__12030971_1_ null null C__12030971_1_ is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is C/T SNP located in the intron region of the DRD2 gene. 5976 9517 C C 5?- ctcacagacccagagagagacttac C gtcccagagctagttaattc -3? 9518 T T 5?- ctcacagacccagagagagacttac T gtcccagagctagttaattc -3? SI001307L C_____23649_10 null null C_____23649_10 is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is A/G SNP located in the intron region of the DRD2 gene. 5980 9523 A A 5?- ctcccaccttccctctccctctgga A actttctggatgccctgggt -3? 9524 G G 5?- ctcccaccttccctctccctctgga G actttctggatgccctgggt -3? SI001306K C___7486613_10 C null C___7486613_10 is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is C/T (reverse) SNP located in the intron region of the DRD2 gene. 5979 9521 A A 5?-cagacagggatgagagtgt A gagattgggcagaccctctt -3? 9522 G G 5?-cagacagggatgagagtgt G gagattgggcagaccctctt -3? SI001234K 6 SNP haplotype null null The 5 sites ordered from 5' to 3' areintron 4 C/T a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI001230G"(UID=SI001230G)/aintron 4 A/G a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI001231H"(UID=SI001231H)/aintron 6 C2312del a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI001232I"(UID=SI001232I)/aexon 7 Ser311Cys a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI000138M"(UID=SI000138M)/aexon 8 HpaII RFLP a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI001233J"(UID=SI001233J)/aTaqI A a href="http://alfred.med.yale.edu/alfred/recordinfo.asp?condition=sites.site_uid='SI000144J"(UID=SI000144J)/aThe alleles are described by nucleotide, '+' for site present and '-' for site deletion or absence. PU001962S 9325 A A C/A/+/C/A/+ 9326 B B T/G/+/C/A/+ 9327 C C T/G/+/C/G/+ 9328 D D T/G/+/G/G/+ 9329 E E T/G/+/C/A/- 9330 F F T/G/-/C/A/- 9331 Af Af C/A/+/C/A/- 9332 Aff Aff C/A/-/C/A/- 9333 Ac Ac C/A/+/C/G/+ 9334 Fa Fa T/G/-/C/A/+ SI001232I intron 6 C2312del null null An intron 6 C deletion located at bp 2312. PU001962S 9321 + + 5'-gcaggttctggggtaggacgCagcagagcagctgcggggac-3' 9322 - - 5'-gcaggttctggggtaggacg_agcagagcagctgcggggac-3' SI001047M C___2601168_1_ null null C___2601168_1_ is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is A/G SNP. PU000002C 4566 7968 A A 5'-tgggtgtctgaggcccttgcccctc A cttatcttctcccagatacataaga-3' 7969 G G 5'-tgggtgtctgaggcccttgcccctc G cttatcttctcccagatacataaga-3' SI001048N C__11339234_20 null null C__11339234_20 is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is A/G SNP. PU000002C 4567 7970 A A 5'-cataagattcctaattgtgggatat A cttttaagcgtccatccaggccaa-3' 7971 G G 5'-cataagattcctaattgtgggatat G cttttaagcgtccatccaggccaa-3' SI001049O C__11339239_1_ null null C__11339239_1_ is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is A/C SNP. PU000002C 4568 7972 A A 5'-atgtggttttctagacttctattga A aaatcctgctttatggacagggatg-3' 7973 C C 5'-atgtggttttctagacttctattga C aaatcctgctttatggacagggatg-3' SI001579W C____454106_10 null null C____454106_10 is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is a C/T SNP in the untranslated region of DRD2 gene. PU000002C 6983 11115 C C 5? ? aatgactgtcttttacactc C atgggccatctataaatggt -3? 11116 T T 5? ? aatgactgtcttttacactc T atgggccatctataaatggt -3? LO000169Q CD4 antigen (p55) CD4 12 12pter-p12 The CD4 gene encodes the T4 antigen, a glycoprotein of approximately 55 kDa, expressed on the surface of helper T lymphocytes. CD4 is the official designation for T-cell antigen T4/leu3. CD stands for "cluster of differentiation". The number that follows is arbitrarily assigned but sequential in time. The CD4 gene spans at least 33 kb and is composed of 10 exons (Maddon et al., 1987) [PubMed ID: 3501122]. With genetic blotting experiments and in situ hybridization, CD4 has been located on chromosome 12 at 12pter-p12 (Isobe et al., 1986 [PubMed ID: 3086883] and Kozbor et al., 1986 [PubMed ID: 3080518]). Thus, the CD4 gene is not linked to any known member of the immunoglobulin gene family, including its counterpart gene, T8, which resides on human chromosome 2 immediately distal to the immunoglobulin kappa locus (Isobe et al., 1986) [PubMed ID: 3086883]. The overall structure of T4 consists of an N-terminal variable (V)-like domain, a joining (J)-like region, a third extracellular domain, a membrane-spanning region homologous to class II major histocompatibility complex (MHC) beta-chains, and a highly charged cytoplasmic domain (Maddon et al., 1985) [PubMed ID: 2990730]. In spite of the role in immune response, CD4 also serves as human immunodeficiency virus (HIV) receptors, binding directly to the envelope protein gp120 on HIV (Lyerly et al., 1987) [PubMed ID: 3037522]. The cytoplasmic part of CD4 is known to be essential for interaction with the HIV-1 proteins Vpu and Nef (Willbold and Rosch, 1996) [PubMed ID: 11725124] PU000026I PU000783S PU000784T PU000785U PU000786V PU000787W PU000788X PU000887X 330 1623 1624 2239 SI000731L G-784C null null G to C substitution in the 5' promoter region. This polymorphism is between the (CTTTT) pentanucleotide STRP and the Alu deletion, 960 bp from the(CTTTT) pentanucleotide STRP, 10.8 kb from CD4 locus start codon. PU000002C 3180 5318 6614 G G 5'-ggcagtgaca G tttgactcct-3' 6615 C C 5'-ggcagtgaca C tttgactcct-3' SI000128L Alu Ins/Del No Alu deletion Direct sequencing on PCR product on primate DNA A 256 bp deletion encompassing most of an Alu element. The deletion ends 1.665 kb upstream of the CD4 start codon. PU000789Y PU001317M PU001322I 3675 3756 4169 1787 Alu Insertion + 5'-cccaggct GGAG "248 bp" AAAA gtgcatctt-3' 1788 Alu Deletion - 5'-cccaggctgtgcatctt-3' SI000129M CD4 (CTTTT) subn/sub pentanucleotide repeat (version 1) null null The STRP at the CD4 locus consists of the pentanucleotide sequence CTTTT repeated between 4 and 15 times. By the protocol given, the products (including flanking sequence) of the PCR range in size from 80 bp for a 4-repeat allele to 135 bp for a 15-repeat allele. PU000026I PU000887X 3757 4616 1797 135 135 allele size in base pairs 1798 80 80 allele size in base pairs 1799 85 85 allele size in base pairs 1800 90 90 allele size in base pairs 1790 100 100 allele size in base pairs 1789 95 95 allele size in base pairs 1791 105 105 allele size in base pairs 1796 130 130 allele size in base pairs 1795 125 125 allele size in base pairs 1794 120 120 allele size in base pairs 1792 110 110 allele size in base pairs 1793 115 115 allele size in base pairs 8807 75 75 allele size in base pairs SI000185O 2-site haplotype (CTTTT pentanucleotide STRP, Alu deletion) null null The 2-site haplotype (ordered from left to right) is comprised of the CTTTT pentanucleotide STRP (UID=SI000129M) and Alu deletion (UID= SI000128L) sites. The distance between these two sites is 9.997 kb. PU000026I 2066 95+ 95+ STRP allele size (95 bp), no deletion in Alu element 2067 95- 95- STRP allele size (95 bp), deletion in Alu element 2064 90+ 90+ STRP allele size (90 bp), no deletion in Alu element 2065 90- 90- STRP allele size (90 bp), deletion in Alu element 2062 85+ 85+ STRP allele size (85 bp), no deletion in Alu element 2063 85- 85- STRP allele size (85 bp), deletion in Alu element 2060 80+ 80+ STRP allele size (80 bp), no deletion in Alu element 2061 80- 80- STRP allele size (80 bp), deletion in Alu element 2058 135+ 135+ STRP allele size (135 bp), no deletion in Alu element 2059 135- 135- STRP allele size (135 bp), deletion in Alu element 2056 130+ 130+ STRP allele size (130 bp), no deletion in Alu element 2057 130- 130- STRP allele size (130 bp), deletion in Alu element 2054 125+ 125+ STRP allele size (125 bp), no deletion in Alu element 2055 125- 125- STRP allele size (125 bp), deletion in Alu element 2052 120+ 120+ STRP allele size (120 bp), no deletion in Alu element 2053 120- 120- STRP allele size (120 bp), deletion in Alu element 2050 115+ 115+ STRP allele size (115 bp), no deletion in Alu element 2051 115- 115- STRP allele size (115 bp), deletion in Alu element 2048 110+ 110+ STRP allele size (110 bp), no deletion in Alu element 2049 110- 110- STRP allele size (110 bp), deletion in Alu element 2046 105+ 105+ STRP allele size (105 bp), no deletion in Alu element 2047 105- 105- STRP allele size (105 bp), deletion in Alu element 2044 100+ 100+ STRP allele size (100 bp), no deletion in Alu element 2045 100- 100- STRP allele size (100 bp), deletion in Alu element SI000714M TaqI null null A C/A SNP altering a Taq site located 6.86 kb downstream of exon 9 of CD4 locus and 113 bp into intron 4 of the "Protein A2" gene. This SNP was identifed and mapped by resequencing samples from ethnically diverse individuals (Kidd Lab unpublished)and later also found in JSNP. PU000002C 3675 3755 4170 6612 Taq Site Absent 1=A 5'-cctggctttcagggcaccat A gagctgggtgaaaga-3' 6613 Taq Site Present 2=C 5'-cctggctttcagggcaccat C gagctgggtgaaaga-3' SI000867V D12S1623 null null This GT STRP is located in intron 2 of the gene CD4. PU001381N 4027 7102 206 206 5'-aggcaaccaaggttattt (GT)sub8/sub tttgggacagtctc-3' 7103 208 208 5'-aggcaaccaaggttattt (GT)sub9/sub tttgggacagtctc-3' 7104 214 214 5'-aggcaaccaaggttattt (GT)sub12/sub tttgggacagtctc-3' 7105 218 218 5'-aggcaaccaaggttattt (GT)sub14/sub tttgggacagtctc-3' 7106 220 220 5'-aggcaaccaaggttattt (GT)sub15/sub tttgggacagtctc-3' 7107 222 222 5'-aggcaaccaaggttattt (GT)sub16/sub tttgggacagtctc-3' 7108 224 224 5'-aggcaaccaaggttattt (GT)sub17/sub tttgggacagtctc-3' 7109 226 226 5'-aggcaaccaaggttattt (GT)sub18/sub tttgggacagtctc-3' 7110 228 228 5'-aggcaaccaaggttattt (GT)sub19/sub tttgggacagtctc-3' 7111 230 230 5'-aggcaaccaaggttattt (GT)sub20/sub tttgggacagtctc-3' 7112 232 232 5'-aggcaaccaaggttattt (GT)sub21/sub tttgggacagtctc-3' 7113 234 234 5'-aggcaaccaaggttattt (GT)sub22/sub tttgggacagtctc-3' 7114 236 236 5'-aggcaaccaaggttattt (GT)sub23/sub tttgggacagtctc-3' 7115 238 238 5'-aggcaaccaaggttattt (GT)sub24/sub tttgggacagtctc-3' 7116 240 240 5'-aggcaaccaaggttattt (GT)sub25/sub tttgggacagtctc-3' SI001308M C___2184681_10 C null C___2184681_10 is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is C/T SNP located in the intron region of the CD4 gene. 5981 9525 C C 5?- aggctgggctggatgtgtgcataca C ttcagtgacccgttttagaa -3? 9526 T T 5?- aggctgggctggatgtgtgcataca T ttcagtgacccgttttagaa -3? SI001309N C___2184696_10 null null C___2184696_10 is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is A/G SNP located in the intron region of the CD4 gene. 5982 9527 A A 5?- aagttatttgtaaatattggttttg A tgctaacctagaattccatc -3? 9528 G G 5?- aagttatttgtaaatattggttttg G tgctaacctagaattccatc -3? SI001066N C___1217691_10 null null C___1217691_10 is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is C/T SNP located in the gene CD4. PU000002C 5216 8119 C C 5'-gcccttaactagctgaggcaagtac C ctctggtttcccccagtccctaccc-3' 8120 T T 5'-gcccttaactagctgaggcaagtac T ctctggtttcccccagtccctaccc-3' SI001067O C___2184682_10 null null C___2184682_10 is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is C/T SNP located in the region of the gene CD4. PU000002C 4604 8121 C C 5'-gtgactttcgctcctccatacaatt C aatttggcttaagttagccaaagcc-3' 8122 T T 5'-gtgactttcgctcctccatacaatt T aatttggcttaagttagccaaagcc-3' SI001068P C___2184703_1_ null null C___2184703_1_ is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is C/T SNP located in the region of the gene CD4. PU000002C 4605 8123 C C 5'-ccttcaagcctagcccttctctcat C atttctctctgaccctctccccact-3' 8124 T T 5'-ccttcaagcctagcccttctctcat T atttctctctgaccctctccccact-3' SI001069Q C__11338582_10 null null C__11338582_10 is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is C/T SNP located in the region of the gene CD4. PU001658U 4606 8125 C C 5'-ggggtagagggggacagcggcgaca C tgagacctgactcctttcttttcca-3' 8126 T T 5'-ggggtagagggggacagcggcgaca T tgagacctgactcctttcttttcca-3' SI001070I CD4 (CTTTT)subn/sub pentanucleotide repeat (version 2) null null This (CTTTT)n pentanucleotide repeat is located in the gene CD4.Allelic nomenclature is based on the number of repeat units. PU001508O 4616 8450 4 4 null 8128 5 5 null 8129 6 6 null 8130 7 7 null 8131 8 8 null 8132 11 11 null 8133 9 9 null 8134 10 10 null 8135 12 12 null 8136 14 14 null 8145 13 13 null 8146 15 15 null 8147 16 16 null LO000171J Dystrophia myotonica 1 (includes dystrophia myotonia protein kinase) DM1 19 19q13.3 Dystrophia myotonica (DM) is an autosomal dominant multiorgan disorder characterized by muscle wasting and weakness, ptosis, myotonia, cataract, cardiomyopathy, gonadal atrophy, and mental deficiency (Harper, 1989). DM is one of several genetic disorders exhibiting genetic anticipation in families (an increase in severity and an earlier age at onset, in successive generations), because of the expansion of an unstable trinucleotide (CTG)SUBn/SUB repeat array located in the 3' untranslated region of the myotonic protein kinase gene (DMPK) on chromosome 19q13.3 (Brook et al., 1992 [PubMed ID: 1310900] and Fu et al., 1992 [PubMed ID: 1546326]). Mahadevan et al. (1993) reported that the (CTG)SUBn/SUB repeat (located within exon 15 of the DMPK gene) is in complete linkage disequilibrium with an Alu element polymorphism (located 5 kb telomeric to the (CTG)SUBn/SUB repeat), suggesting that DM is a consequence of one or few ancestral mutations [PubMed ID: 8449517]. Other RFLPs such as HinfI (Goldman et al., 1995) [PubMed ID: 7762560] (located in intron 9, 2.5 kb downstream of Alu element) and TaqI (Neville et al., 1994) [PubMed ID: 7909252] (15 kb downstream of (CTG)SUBn/SUB repeat) polymorphic sites have been reported and span 17.5 kb on the DMPK gene (Tishkoff et al., 1998) [PubMed ID: 9585589]. PU000008I PU000848U PU000849V PU000850N PU000851O PU000852P PU000864S 1665 1666 1667 1668 1669 1670 1671 2089 SI000132G intron 9 HinfI Site Present null A T/G SNP altering a HinfI restriction site. This polymorphism is located in intron 9 of DMPK gene, 2.5 kb upstream of (CTG) repeat and 2.5 kb downstream of Alu element. PU000008I PU000863R PU000864S 1807 2977 3684 4127 1832 HinfI Site Present 2=G 5'-tggttctccaccaga G AATC agcattct-3' 1831 HinfI Site Absent 1=T 5'-tggttctccaccaga T AATC agcattct-3' SI000182L 3-site haplotype (Alu, HinfI, TaqI) null null The 3-site haplotype (ordered from left to right) is comprised of the Alu deletion (UID=SI000130E), HinfI (UID=SI000132G), and TaqI (UID= SI000133H) sites. The distance between Alu and HinfI sites is 2.5 kb. The distance between HinfI and TaqI sites is 17.5 kb. PU000008I 2036 -++ -++ Alu deletion, HinfI site present, TaqI site present 2037 -+- -+- Alu deletion, HinfI site present, TaqI site absent 2038 --+ --+ Alu deletion, HinfI site absent, TaqI site present 2039 --- --- Alu deletion, HinfI site absent, TaqI site absent 2032 +++ +++ No Alu deletion, HinfI site present, TaqI site present 2033 ++- ++- No Alu deletion, HinfI site present, TaqI site absent 2034 +-+ +-+ No Alu deletion, HinfI site absent, TaqI site present 2035 +-- +-- No Alu deletion, HinfI site absent, TaqI site absent SI000130E intron 8 Alu Ins/Del No Alu deletion null This polymorphism is located in intron 8 of DMPK gene, 5 kb telomeric to the (CTG)SUBn/SUB repeat. By the PCR-based protocol given, the PCR product contains fragments of 1008 bp and 494 bp for heterozygous (+/-) sample. PU000008I PU000850N 1 368 3684 4126 1801 Alu Insertion + 5'-ccgaggcgggtggatcac "977 bp triple Alu" gaggtcagaagat-3' 1802 Alu Deletion - 5'-ccgaggcgggtggatcac "no 977 bp triple Alu" gaggtcagaagat-3' SI000133H TaqI Site Present null This polymorism is located 15 kb downstream of (CTG) repeat. By the PCR-based protocol given, digestion of the PCR product with TaqI yields fragments of 574 bp when the restriction site is present and uncut fragment of 676 bp when the site is absent. PU000008I 5196 1834 TaqI Site Present 2 null 1833 TaqI Site Absent 1 null SI000131F (CTG) trinucleotide repeat null null This unstable (CTG)subn/sub trinucleotide repeat polymorphism is located in 3' untranslated region of the myotonin protein kinase gene (DMPK) on chromosome 19q13.3. The range of tandemly repeated copy number of (CTG) is from 5 to 38 in the normal population. Mahadevan et al.1992 (PubMed: 1546325) suggests that DM (Myotonic dystrophy) is caused primarily by a mutation or mutations that increase the size of a genomic fragment due to the amplification of a CTG repeat. PU000008I PU001302G 1804 9 9 Repeat number of (CTG)SUBn/SUB, n=9 1805 8 8 Repeat number of (CTG)SUBn/SUB, n=8 1806 7 7 Repeat number of (CTG)SUBn/SUB, n=7 1819 6 6 Repeat number of (CTG)SUBn/SUB, n=6 1808 5 5 Repeat number of (CTG)SUBn/SUB, n=5 1807 35 35 Repeat number of (CTG)SUBn/SUB, n=35 1809 32 32 Repeat number of (CTG)SUBn/SUB, n=32 1810 30 30 Repeat number of (CTG)SUBn/SUB, n=30 1811 29 29 Repeat number of (CTG)SUBn/SUB, n=29 1812 28 28 Repeat number of (CTG)SUBn/SUB, n=28 1813 27 27 Repeat number of (CTG)SUBn/SUB, n=27 1814 26 26 Repeat number of (CTG)SUBn/SUB, n=26 1815 25 25 Repeat number of (CTG)SUBn/SUB, n=25 1803 24 24 Repeat number of (CTG)SUBn/SUB, n=24 1817 23 23 Repeat number of (CTG)SUBn/SUB, n=23 1824 22 22 Repeat number of (CTG)SUBn/SUB, n=22 1829 21 21 Repeat number of (CTG)SUBn/SUB, n=21 1828 20 20 Repeat number of (CTG)SUBn/SUB, n=20 1827 19 19 Repeat number of (CTG)SUBn/SUB, n=19 1825 18 18 Repeat number of (CTG)SUBn/SUB, n=18 1823 17 17 Repeat number of (CTG)SUBn/SUB, n=17 1830 16 16 Repeat number of (CTG)SUBn/SUB, n=16 1822 15 15 Repeat number of (CTG)SUBn/SUB, n=15 1821 14 14 Repeat number of (CTG)SUBn/SUB, n=14 1816 13 13 Repeat number of (CTG)SUBn/SUB, n=13 1820 12 12 Repeat number of (CTG)SUBn/SUB, n=12 1826 11 11 Repeat number of (CTG)SUBn/SUB, n=11 1818 10 10 Repeat number of (CTG)SUBn/SUB, n=10 SI000982T C__11712219_1_ null null C__11712219_1_ is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is G/T SNP located in intron region of the gene DM1. PU001658U 4351 4354 7717 T T 5'-ctgaatggcctggcccttcttggcc T ccaccttcccatctgtgaaatggga-3' 7716 G G 5'-ctgaatggcctggcccttcttggcc G ccaccttcccatctgtgaaatggga-3' SI000763Q C4800T null null A C/T SNP located 12.6 kb downstream of the TaqI site and 39.3 kb downstream of the (CTG) trinucleotide repeat. It was discovered by resequencing. PU000002C 6649 C C 5'-tggagaggag C gagtggggga-3' 6650 T T 5'-tggagaggag T gagtggggga-3' SI000250H 2-site haplotype (Alu, HinfI) null null The 2-site haplotype (ordered from left to right) is comprised of the Alu deletion (UID=SI000130E) and HinfI (UID=SI000132G) sites. The distance between Alu and HinfI sites is 2.5 kb. PU000008I 2779 -+ -+ Alu deletion, HinfI site present 2780 -- -- Alu deletion, HinfI site absent 2777 ++ ++ No Alu deletion, HinfI site present 2778 +- +- No Alu deletion, HinfI site absent SI001115I C___2677027_10 null null C___2677027_10 is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is a C/T SNP located in the region of the gene DM1. PU000002C 5232 8519 C C 5'-ggtttgtccttttcatacctttgtc C cctaattgtgctacaattggaagac-3' 8520 T T 5'-ggtttgtccttttcatacctttgtc T cctaattgtgctacaattggaagac-3' LO000193N Plasminogen activator, tissue PLAT 8 8p11.2 This gene encodes tissue-type plasminogen activator (t-PA), a secreted serine protease which converts the inactive proenzyme plasminogen to plasmin, a proteinase associated with processes such as fibrinolysis and tissue remodeling (Benham et al., 1984) [PubMed ID: 6100560]. The PLAT gene spans 36,594 bp located on the short arm of chromosome 8 at 8p11.2 (Degen et al., 1986) [PubMed ID: 3009482]. The gene is comprised of 14 exons, ranging in size from 43 to 914 bp. In the adult brain, t-PA is highly expressed in the hippocampus, amygdala, cerebellum, and hypothalamus. These regions regulate many biological functions, including learning and memory (hippocampus), emotion and fear (amygdala), motor coordination (cerebellum), and autonomic, endocrine, and visceral function (hypothalamus). Tsirka et al. (1995) [PubMed ID: 7566088] identified that t-PA plays a role in neuronal degeneration (Alzheimer's disease) and seizure. The gene and 5' flanking region contain 28 copies of Alu repetitive DNA sequence (Degen et al., 1986) [PubMed ID: 3009482] including a polymorphic Alu element referred to as TPA25 in much of the literature. PU000019K PU000639S PU000640K PU000641L PU000642M PU001347P 1276 1277 1278 1279 SI000220E 2-site haplotype ((CA) repeat 1, Alu) null null The 2-site haplotype (ordered from left to right) is comprised of (CA)SUBn/SUB repeat_#1 (located in intron 1) and Alu insertion (UID=SI000152I) sites, which are 21.92 kb apart. PU000019K PU000645P 1290 2421 113+ 113+ (CA)SUB113/SUB, Alu element present 2423 113- 113- (CA)SUB113/SUB, Alu element absent 2419 111- 111- (CA)SUB111/SUB, Alu element absent 2416 109- 109- (CA)SUB109/SUB, Alu element absent 2427 115- 115- (CA)SUB115/SUB, Alu element absent 2525 99+ 99+ (CA)SUB99/SUB, Alu element present 2526 99- 99- (CA)SUB99/SUB, Alu element absent 2524 173- 173- (CA)SUB173/SUB, Alu element absent 2523 171- 171- (CA)SUB171/SUB, Alu element absent 2521 169+ 169+ (CA)SUB169/SUB, Alu element present 2522 169- 169- (CA)SUB169/SUB, Alu element absent 2520 167+ 167+ (CA)SUB167/SUB, Alu element present 2517 165- 165- (CA)SUB165/SUB, Alu element absent 2514 163+ 163+ (CA)SUB163/SUB, Alu element present 2515 163- 163- (CA)SUB163/SUB, Alu element absent 2513 161- 161- (CA)SUB161/SUB, Alu element absent 2511 159+ 159+ (CA)SUB159/SUB, Alu element present 2512 159- 159- (CA)SUB159/SUB, Alu element absent 2508 157+ 157+ (CA)SUB157/SUB, Alu element present 2509 157- 157- (CA)SUB157/SUB, Alu element absent 2504 155+ 155+ (CA)SUB155/SUB, Alu element present 2505 155- 155- (CA)SUB155/SUB, Alu element absent 2501 153+ 153+ (CA)SUB153/SUB, Alu element present 2502 153- 153- (CA)SUB153/SUB, Alu element absent 2498 151+ 151+ (CA)SUB151/SUB, Alu element present 2499 151- 151- (CA)SUB151/SUB, Alu element absent 2495 149+ 149+ (CA)SUB149/SUB, Alu element present 2496 149- 149- (CA)SUB149/SUB, Alu element absent 2491 147+ 147+ (CA)SUB147/SUB, Alu element present 2492 147- 147- (CA)SUB147/SUB, Alu element absent 2487 145+ 145+ (CA)SUB145/SUB, Alu element present 2488 145- 145- (CA)SUB145/SUB, Alu element absent 2483 143+ 143+ (CA)SUB143/SUB, Alu element present 2484 143- 143- (CA)SUB143/SUB, Alu element absent 2479 141+ 141+ (CA)SUB141/SUB, Alu element present 2480 141- 141- (CA)SUB141/SUB, Alu element absent 2475 139+ 139+ (CA)SUB139/SUB, Alu element present 2476 139- 139- (CA)SUB139/SUB, Alu element absent 2471 137+ 137+ (CA)SUB137/SUB, Alu element present 2472 137- 137- (CA)SUB137/SUB, Alu element absent 2465 135+ 135+ (CA)SUB135/SUB, Alu element present 2467 135- 135- (CA)SUB135/SUB, Alu element absent 2461 133+ 133+ (CA)SUB133/SUB, Alu element present 2463 133- 133- (CA)SUB133/SUB, Alu element absent 2457 131+ 131+ (CA)SUB131/SUB, Alu element present 2459 131- 131- (CA)SUB131/SUB, Alu element absent 2453 129+ 129+ (CA)SUB129/SUB, Alu element present 2455 129- 129- (CA)SUB129/SUB, Alu element absent 2449 127+ 127+ (CA)SUB127/SUB, Alu element present 2451 127- 127- (CA)SUB127/SUB, Alu element absent 2445 125+ 125+ (CA)SUB125/SUB, Alu element present 2447 125- 125- (CA)SUB125/SUB, Alu element absent 2441 123+ 123+ (CA)SUB123/SUB, Alu element present 2443 123- 123- (CA)SUB123/SUB, Alu element absent 2437 121+ 121+ (CA)SUB121/SUB, Alu element present 2439 121- 121- (CA)SUB121/SUB, Alu element absent 2433 119+ 119+ (CA)SUB119/SUB, Alu element present 2435 119- 119- (CA)SUB119/SUB, Alu element absent 2429 117+ 117+ (CA)SUB117/SUB, Alu element present 2431 117- 117- (CA)SUB117/SUB, Alu element absent 2425 115+ 115+ (CA)SUB115/SUB, Alu element present SI000221F 2-site haplotype ((CA) repeat 2, Alu) null null The 2-site haplotype (ordered from left to right) is comprised of (CA)SUBn/SUB repeat_#2 (located in intron 1) and Alu insertion (UID=SI000152I) sites, which are 11.553 kb apart. PU000019K PU000647R 1294 1295 2422 113+ 113+ (CA)SUB113/SUB, Alu element present 2424 113- 113- (CA)SUB113/SUB, Alu element absent 2418 111+ 111+ (CA)SUB111/SUB, Alu element present 2420 111- 111- (CA)SUB111/SUB, Alu element absent 2415 109+ 109+ (CA)SUB109/SUB, Alu element present 2417 109- 109- (CA)SUB109/SUB, Alu element absent 2413 107+ 107+ (CA)SUB107/SUB, Alu element present 2414 107- 107- (CA)SUB107/SUB, Alu element absent 2411 105+ 105+ (CA)SUB105/SUB, Alu element present 2412 105- 105- (CA)SUB105/SUB, Alu element absent 2518 166+ 166+ (CA)SUB166/SUB, Alu element present 2519 166- 166- (CA)SUB166/SUB, Alu element absent 2516 164- 164- (CA)SUB164/SUB, Alu element absent 2510 158+ 158+ (CA)SUB158/SUB, Alu element present 2506 156+ 156+ (CA)SUB156/SUB, Alu element present 2507 156- 156- (CA)SUB156/SUB, Alu element absent 2503 154- 154- (CA)SUB154/SUB, Alu element absent 2500 152- 152- (CA)SUB152/SUB, Alu element absent 2497 150- 150- (CA)SUB150/SUB, Alu element absent 2493 148+ 148+ (CA)SUB148/SUB, Alu element present 2494 148- 148- (CA)SUB148/SUB, Alu element absent 2489 146+ 146+ (CA)SUB146/SUB, Alu element present 2490 146- 146- (CA)SUB146/SUB, Alu element absent 2485 144+ 144+ (CA)SUB144/SUB, Alu element present 2486 144- 144- (CA)SUB144/SUB, Alu element absent 2481 142+ 142+ (CA)SUB142/SUB, Alu element present 2482 142- 142- (CA)SUB142/SUB, Alu element absent 2477 140+ 140+ (CA)SUB140/SUB, Alu element present 2478 140- 140- (CA)SUB140/SUB, Alu element absent 2473 138+ 138+ (CA)SUB138/SUB, Alu element present 2474 138- 138- (CA)SUB138/SUB, Alu element absent 2469 136+ 136+ (CA)SUB136/SUB, Alu element present 2470 136- 136- (CA)SUB136/SUB, Alu element absent 2466 135+ 135+ (CA)SUB135/SUB, Alu element present 2468 135- 135- (CA)SUB135/SUB, Alu element absent 2462 133+ 133+ (CA)SUB133/SUB, Alu element present 2464 133- 133- (CA)SUB133/SUB, Alu element absent 2458 131+ 131+ (CA)SUB131/SUB, Alu element present 2460 131- 131- (CA)SUB131/SUB, Alu element absent 2454 129+ 129+ (CA)SUB129/SUB, Alu element present 2456 129- 129- (CA)SUB129/SUB, Alu element absent 2450 127+ 127+ (CA)SUB127/SUB, Alu element present 2452 127- 127- (CA)SUB127/SUB, Alu element absent 2446 125+ 125+ (CA)SUB125/SUB, Alu element present 2448 125- 125- (CA)SUB125/SUB, Alu element absent 2442 123+ 123+ (CA)SUB123/SUB, Alu element present 2444 123- 123- (CA)SUB123/SUB, Alu element absent 2438 121+ 121+ (CA)SUB121/SUB, Alu element present 2440 121- 121- (CA)SUB121/SUB, Alu element absent 2434 119+ 119+ (CA)SUB119/SUB, Alu element present 2436 119- 119- (CA)SUB119/SUB, Alu element absent 2430 117+ 117+ (CA)SUB117/SUB, Alu element present 2432 117- 117- (CA)SUB117/SUB, Alu element absent 2426 115+ 115+ (CA)SUB115/SUB, Alu element present 2428 115- 115- (CA)SUB115/SUB, Alu element absent SI000152I TPA25 Alu insertion Alu Absent PCR of 38 non-human primates Alu element insertion polymorphism is located in intron 8 of gene PLAT, which spans sequence position 28463-29469 in GenBank K03021. By typing protocol giving, there are fragments of 260 bp and 570 bp for the Alu absent and present, respectively. PU000019K PU000641L PU001315K PU001317M PU001319O PU001320G PU001322I PU001326M PU001332J PU001337O PU001347P PU001353M PU001354N PU001355O PU001356P PU001359S 6 375 1279 1285 3846 3927 4089 1944 Alu Deletion - ancestral chromosome, Alu element absent: 5'-ccctatgagatta "no 311 bp" gaacactacattac-3' 1945 Alu Insertion + derived chromosome, Alu element present: 5'-ccctatgagatta "311 bp" gaacactacattac-3' SI001274O C___2533651_10 null null C___2533651_10 is an ABI Assays-on-Demandsupfont size=-1TM/font/sup SNP Genotyping Assay ID. This is G/T (reverse strand) SNP located in the intron region of the gene PLAT. 5946 9457 A A 5?- caaactaaccacacctctcc A acaggaccctacagcgggga -3? 9458 C C 5?- caaactaaccacacctctcc C acaggaccctacagcgggga -3? LO000194O Cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7) CFTR 7 7q31-q32 The CFTR gene, identified in 1989 (Riordan et al.) [PubMed ID: 2475911], encodes the cystic fibrosis transmembrane conductance regulator, an ATP-binding cassette (sub-family C, member 7), which corresponds to a cAMP-regulated chloride channel found almost exclusively in the secretory epithelial cells. The gene is located on the long arm of chromosome 7 (Rommens et al., 1989) [PubMed ID: 2772657]. The major mutation in Northern Europe results in deletion of a single amino acid phenylalanine at amino acid position 508 of the normal protein and produces an autosomal recessive disease, cystic fibrosis (CF) (Kerem et al., 1989) [PubMed ID: 2570460]. Several short tandem repeat polymorphisms (STRPs, also known as microsatellites) and single-nucleotide polymorphisms (SNPs) have been described within the CFTR gene (Mateu et al., 2001) [PubMed ID: 11104661]. Both types of markers can be used to trace the origin and evolution of the different CF mutations (Morral et al., 1994 [PubMed ID: 7920636] and Bertranpetit and Calafell, 1996 [p.97-118, ISBN: 0471961523]). PU000213G PU000548R PU000549S PU000612J PU000614L PU000615M 897 898 899 900 901 902 903 904 SI000236L TUB20 PvuII Site Present Digest PCR product with PvuII on primate samples. TUB20 PvuII is a SNP -- a GA nucleotide substitution found in intron 20 (intervening sequence, IVS) of the gene. PU000213G PU000218L 5295 2580 Restriction Site Present 2 (PvuII+) Nucleotide sequence: 5'...CAGCTG...3' 2542 Restriction Site Absent 1 (PvuII-) null SI000232H 6-site haplotype null null The haplotype is comprised of these six genetic systems (in chromosomal order): the IVS1 CA repeat (2001), IVS6a GATT repeat, IVS8 CA repeat, T854 AvaII site, IVS17b TA repeat, and TUB20 PvuII site from the CFTR locus. The frequency table presents the 125 haplotypes that occur at a common frequency of 2% or more out of the 770 haplotypes with non-zero frequency estimates among the 18 population samples studied (Mateu et al., 2001). The remaining 645 rare haplotypes are combined into a "residual" haplotype. The combined frequencies for this "residual" CFTR haplotype are shown for each population along with any of the 125 common haplotypes that are present. The haplotype labels consist of the allele labels of the component systems (defined under each system) displayed in chromosomal order and separated by hyphens. PU000213G 2692 26-7-17-2- 7-1 26-7-17-2- 7-1 IVS1(CA)SUB26/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB7/SUB, TUB20PvuII absent 2691 26-7-17-1-33-2 26-7-17-1-33-2 IVS1(CA)SUB26/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB17/SUB, T854AvaII absent, IVS17b(TA)SUB33/SUB, TUB20PvuII present 2690 26-7-16-1-30-2 26-7-16-1-30-2 IVS1(CA)SUB26/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB30/SUB, TUB20PvuII present 2688 25-7-17-2- 7-1 25-7-17-2- 7-1 IVS1(CA)SUB25/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB7/SUB, TUB20PvuII absent 2687 25-7-16-2- 7-1 25-7-16-2- 7-1 IVS1(CA)SUB25/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB7/SUB, TUB20PvuII absent 2686 25-6-17-2-31-2 25-6-17-2-31-2 IVS1(CA)SUB25/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2685 25-6-17-1-30-2 25-6-17-1-30-2 IVS1(CA)SUB25/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII absent, IVS17b(TA)SUB30/SUB, TUB20PvuII present 2681 24-7-16-2- 7-1 24-7-16-2- 7-1 IVS1(CA)SUB24/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB7/SUB, TUB20PvuII absent 2680 24-7-16-1-31-2 24-7-16-1-31-2 IVS1(CA)SUB24/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2679 24-7-16-1-30-2 24-7-16-1-30-2 IVS1(CA)SUB24/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB30/SUB, TUB20PvuII present 2678 24-7-16-1-29-2 24-7-16-1-29-2 IVS1(CA)SUB24/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB29/SUB, TUB20PvuII present 2677 24-6-17-2-35-2 24-6-17-2-35-2 IVS1(CA)SUB24/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB35/SUB, TUB20PvuII present 2676 24-6-17-1-32-2 24-6-17-1-32-2 IVS1(CA)SUB24/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII absent, IVS17b(TA)SUB32/SUB, TUB20PvuII present 2673 23-7-16-2- 7-2 23-7-16-2- 7-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB7/SUB, TUB20PvuII present 2672 23-7-16-2- 7-1 23-7-16-2- 7-1 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB7/SUB, TUB20PvuII absent 2666 23-7-16-1- 7-1 23-7-16-1- 7-1 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB7/SUB, TUB20PvuII absent 2671 23-7-16-1-43-2 23-7-16-1-43-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB43/SUB, TUB20PvuII present 2670 23-7-16-1-33-2 23-7-16-1-33-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB33/SUB, TUB20PvuII present 2669 23-7-16-1-32-2 23-7-16-1-32-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB32/SUB, TUB20PvuII present 2668 23-7-16-1-31-2 23-7-16-1-31-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2667 23-7-16-1-30-2 23-7-16-1-30-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB30/SUB, TUB20PvuII present 2665 23-6-23-1-19-2 23-6-23-1-19-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB23/SUB, T854AvaII absent, IVS17b(TA)SUB19/SUB, TUB20PvuII present 2664 23-6-21-2-36-2 23-6-21-2-36-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB21/SUB, T854AvaII present, IVS17b(TA)SUB36/SUB, TUB20PvuII present 2663 23-6-18-2-18-2 23-6-18-2-18-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB18/SUB, T854AvaII present, IVS17b(TA)SUB18/SUB, TUB20PvuII present 2662 23-6-17-2-38-2 23-6-17-2-38-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB38/SUB, TUB20PvuII present 2661 23-6-17-2-37-2 23-6-17-2-37-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB37/SUB, TUB20PvuII present 2660 23-6-17-2-35-2 23-6-17-2-35-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB35/SUB, TUB20PvuII present 2659 23-6-17-2-34-2 23-6-17-2-34-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB34/SUB, TUB20PvuII present 2658 23-6-17-2-33-2 23-6-17-2-33-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB33/SUB, TUB20PvuII present 2657 23-6-17-2-32-2 23-6-17-2-32-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB32/SUB, TUB20PvuII present 2656 23-6-17-2-31-2 23-6-17-2-31-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2655 23-6-17-2-30-2 23-6-17-2-30-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB30/SUB, TUB20PvuII present 2654 23-6-17-2-25-2 23-6-17-2-25-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB25/SUB, TUB20PvuII present 2653 23-6-17-2-24-2 23-6-17-2-24-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB24/SUB, TUB20PvuII present 2652 23-6-17-2-23-2 23-6-17-2-23-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB23/SUB, TUB20PvuII present 2651 23-6-17-2-20-2 23-6-17-2-20-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB20/SUB, TUB20PvuII present 2650 23-6-17-2-18-2 23-6-17-2-18-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB18/SUB, TUB20PvuII present 2649 23-6-17-2-15-2 23-6-17-2-15-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB15/SUB, TUB20PvuII present 2648 23-6-17-1-34-2 23-6-17-1-34-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII absent, IVS17b(TA)SUB34/SUB, TUB20PvuII present 2647 23-6-17-1-31-2 23-6-17-1-31-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII absent, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2646 23-6-17-1-27-2 23-6-17-1-27-2 IVS1(CA)SUB23/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII absent, IVS17b(TA)SUB27/SUB, TUB20PvuII present 2643 22-7-21-1-23-2 22-7-21-1-23-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB21/SUB, T854AvaII absent, IVS17b(TA)SUB23/SUB, TUB20PvuII present 2642 22-7-17-2-37-2 22-7-17-2-37-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB37/SUB, TUB20PvuII present 2682 24-7-17-1-31-2 24-7-17-1-31-2 IVS1(CA)SUB24/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB17/SUB, T854AvaII absent, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2636 22-7-16-2- 7-1 22-7-16-2- 7-1 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB7/SUB, TUB20PvuII absent 2640 22-7-16-2-32-2 22-7-16-2-32-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB32/SUB, TUB20PvuII present 2639 22-7-16-2-28-2 22-7-16-2-28-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB28/SUB, TUB20PvuII present 2638 22-7-16-2-20-2 22-7-16-2-20-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB20/SUB, TUB20PvuII present 2637 22-7-16-2-19-2 22-7-16-2-19-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB19/SUB, TUB20PvuII present 2623 22-7-16-1- 7-2 22-7-16-1- 7-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB7/SUB, TUB20PvuII present 2622 22-7-16-1- 7-1 22-7-16-1- 7-1 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB7/SUB, TUB20PvuII absent 2635 22-7-16-1-46-2 22-7-16-1-46-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB46/SUB, TUB20PvuII present 2634 22-7-16-1-45-2 22-7-16-1-45-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB45/SUB, TUB20PvuII present 2633 22-7-16-1-44-2 22-7-16-1-44-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB44/SUB, TUB20PvuII present 2632 22-7-16-1-42-2 22-7-16-1-42-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB42/SUB, TUB20PvuII present 2631 22-7-16-1-35-2 22-7-16-1-35-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB35/SUB, TUB20PvuII present 2630 22-7-16-1-34-2 22-7-16-1-34-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB34/SUB, TUB20PvuII present 2629 22-7-16-1-33-2 22-7-16-1-33-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB33/SUB, TUB20PvuII present 2628 22-7-16-1-32-2 22-7-16-1-32-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB32/SUB, TUB20PvuII present 2627 22-7-16-1-31-2 22-7-16-1-31-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2626 22-7-16-1-30-2 22-7-16-1-30-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB30/SUB, TUB20PvuII present 2625 22-7-16-1-29-2 22-7-16-1-29-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB29/SUB, TUB20PvuII present 2624 22-7-16-1-28-2 22-7-16-1-28-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB28/SUB, TUB20PvuII present 2621 22-7-15-1-35-2 22-7-15-1-35-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB15/SUB, T854AvaII absent, IVS17b(TA)SUB35/SUB, TUB20PvuII present 2620 22-7-14-1-45-2 22-7-14-1-45-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB14/SUB, T854AvaII absent, IVS17b(TA)SUB45/SUB, TUB20PvuII present 2619 22-6-23-1-31-2 22-6-23-1-31-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB23/SUB, T854AvaII absent, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2618 22-6-22-2-19-2 22-6-22-2-19-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB22/SUB, T854AvaII present, IVS17b(TA)SUB19/SUB, TUB20PvuII present 2617 22-6-17-2-37-2 22-6-17-2-37-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB37/SUB, TUB20PvuII present 2616 22-6-17-2-33-2 22-6-17-2-33-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB33/SUB, TUB20PvuII present 2615 22-6-17-2-31-2 22-6-17-2-31-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2614 22-6-16-1-19-2 22-6-16-1-19-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB19/SUB, TUB20PvuII present 2611 21-7-17-2- 7-2 21-7-17-2- 7-2 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB7/SUB, TUB20PvuII present 2610 21-7-17-2- 7-1 21-7-17-2- 7-1 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB7/SUB, TUB20PvuII absent 2609 21-7-17-1-20-2 21-7-17-1-20-2 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB17/SUB, T854AvaII absent, IVS17b(TA)SUB20/SUB, TUB20PvuII present 2608 21-7-16-2- 7-1 21-7-16-2- 7-1 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB7/SUB, TUB20PvuII absent 2603 21-7-16-1- 7-2 21-7-16-1- 7-2 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB7/SUB, TUB20PvuII present 2602 21-7-16-1- 7-1 21-7-16-1- 7-1 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB7/SUB, TUB20PvuII absent 2607 21-7-16-1-32-2 21-7-16-1-32-2 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB32/SUB, TUB20PvuII present 2606 21-7-16-1-31-2 21-7-16-1-31-2 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2641 22-7-17-1-31-2 22-7-17-1-31-2 IVS1(CA)SUB22/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB17/SUB, T854AvaII absent, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2604 21-7-16-1-29-2 21-7-16-1-29-2 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB29/SUB, TUB20PvuII present 2601 21-7-14-2-38-2 21-7-14-2-38-2 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB14/SUB, T854AvaII present, IVS17b(TA)SUB38/SUB, TUB20PvuII present 2600 21-6-23-1-33-2 21-6-23-1-33-2 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB23/SUB, T854AvaII absent, IVS17b(TA)SUB33/SUB, TUB20PvuII present 2599 21-6-23-1-31-2 21-6-23-1-31-2 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB23/SUB, T854AvaII absent, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2598 21-6-23-1-20-2 21-6-23-1-20-2 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB23/SUB, T854AvaII absent, IVS17b(TA)SUB20/SUB, TUB20PvuII present 2596 21-6-17-2- 7-1 21-6-17-2- 7-1 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB7/SUB, TUB20PvuII absent 2597 21-6-17-2-31-2 21-6-17-2-31-2 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2595 21-6-16-1-32-2 21-6-16-1-32-2 IVS1(CA)SUB21/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB32/SUB, TUB20PvuII present 2592 20-7-17-1-27-2 20-7-17-1-27-2 IVS1(CA)SUB20/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB17/SUB, T854AvaII absent, IVS17b(TA)SUB27/SUB, TUB20PvuII present 2590 20-7-16-2- 7-1 20-7-16-2- 7-1 IVS1(CA)SUB20/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB7/SUB, TUB20PvuII absent 2591 20-7-16-2-30-2 20-7-16-2-30-2 IVS1(CA)SUB20/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB30/SUB, TUB20PvuII present 2589 20-7-16-1-44-2 20-7-16-1-44-2 IVS1(CA)SUB20/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB44/SUB, TUB20PvuII present 2588 20-7-16-1-33-2 20-7-16-1-33-2 IVS1(CA)SUB20/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB33/SUB, TUB20PvuII present 2587 20-7-16-1-32-2 20-7-16-1-32-2 IVS1(CA)SUB20/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB32/SUB, TUB20PvuII present 2586 20-7-16-1-31-2 20-7-16-1-31-2 IVS1(CA)SUB20/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2585 20-7-16-1-30-2 20-7-16-1-30-2 IVS1(CA)SUB20/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII absent, IVS17b(TA)SUB30/SUB, TUB20PvuII present 2584 20-7-15-1-29-2 20-7-15-1-29-2 IVS1(CA)SUB20/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB15/SUB, T854AvaII absent, IVS17b(TA)SUB29/SUB, TUB20PvuII present 2583 20-7-15-1-20-2 20-7-15-1-20-2 IVS1(CA)SUB20/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB15/SUB, T854AvaII absent, IVS17b(TA)SUB20/SUB, TUB20PvuII present 2576 18-7-22-2-22-2 18-7-22-2-22-2 IVS1(CA)SUB18/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB22/SUB, T854AvaII present, IVS17b(TA)SUB22/SUB, TUB20PvuII present 2575 18-7-17-2-31-2 18-7-17-2-31-2 IVS1(CA)SUB18/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB17/SUB, T854AvaII present, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2572 18-7-16-2- 7-2 18-7-16-2- 7-2 IVS1(CA)SUB18/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB7/SUB, TUB20PvuII present 2574 18-7-16-2-31-2 18-7-16-2-31-2 IVS1(CA)SUB18/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2573 18-7-16-2-28-2 18-7-16-2-28-2 IVS1(CA)SUB18/SUB, IVS6a(GATT)SUB7/SUB, IVS8(CA)SUB16/SUB, T854AvaII present, IVS17b(TA)SUB28/SUB, TUB20PvuII present 2571 18-6-23-2-22-2 18-6-23-2-22-2 IVS1(CA)SUB18/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB23/SUB, T854AvaII present, IVS17b(TA)SUB22/SUB, TUB20PvuII present 2570 18-6-22-2-22-2 18-6-22-2-22-2 IVS1(CA)SUB18/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB22/SUB, T854AvaII present, IVS17b(TA)SUB22/SUB, TUB20PvuII present 2569 18-6-21-1-19-2 18-6-21-1-19-2 IVS1(CA)SUB18/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB21/SUB, T854AvaII absent, IVS17b(TA)SUB19/SUB, TUB20PvuII present 2566 17-6-25-2-23-2 17-6-25-2-23-2 IVS1(CA)SUB17/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB25/SUB, T854AvaII present, IVS17b(TA)SUB23/SUB, TUB20PvuII present 2565 17-6-25-1-35-2 17-6-25-1-35-2 IVS1(CA)SUB17/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB25/SUB, T854AvaII absent, IVS17b(TA)SUB35/SUB, TUB20PvuII present 2564 17-6-23-2-31-2 17-6-23-2-31-2 IVS1(CA)SUB17/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB23/SUB, T854AvaII present, IVS17b(TA)SUB31/SUB, TUB20PvuII present 2563 17-6-23-2-30-2 17-6-23-2-30-2 IVS1(CA)SUB17/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB23/SUB, T854AvaII present, IVS17b(TA)SUB30/SUB, TUB20PvuII present 2562 17-6-23-1-20-2 17-6-23-1-20-2 IVS1(CA)SUB17/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB23/SUB, T854AvaII absent, IVS17b(TA)SUB20/SUB, TUB20PvuII present 2561 17-6-22-2- 7-1 17-6-22-2- 7-1 IVS1(CA)SUB17/SUB, IVS6a(GATT)SUB6/SUB, IVS8(CA)SUB22/SUB, T854AvaII present, IVS17b(TA