|Name||ALFRED UID||Locus Symbol||Chromosome||Band Position|
|Alu insertion A25||LO000449R||ALU-A25||8||8q21.3|
See Sites List
External Resources: GenBank sequence
References: See References
Locus Description: This Alu insertion polymorphism is located on chromosome 8, ~500 kb downstream (centromeric) of MMP16, the closest identified gene. Sequence analysis showed that this Alu element is flanked by perfect direct repeats and a 3' oligo(dA)-rich tail. Also there is a 34 nucleotides deletion at the 5' end and has a single CpG mutation compared to the human specific consensus sequence.
AAGAAAATATTTC [ALU]AAGAAAATATTTC shows nucleotide sequence of the direct repeats flanking the A25 Alu element.
Sites within this locus ordered by their chromosomal position in the 37.3 NCBI build:
| Site Name |
(Navigates to ALFRED
|dbSNP rs# |
(Navigates to dbSNP
|A25 Alu insertion||   ||42039907||71|
© 2012 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan