|Name||ALFRED UID||Locus Symbol||Chromosome||Band Position|
|Alu insertion HS2.25||LO000477S||ALU-HS2.25||13|
See Sites List
External Resources: GenBank sequence
References: See References
Locus Description: HS2.25 polymorphic Alu element belongs to the young (Ya5/8) subfamily of human-specfic Alu repeats. It is located on chromosome 13. DNA sequence analysis revealed that it has a long 3'-oligo-dA-rich tail (41 nucleotides in length), a low level of random mutation, and was flanked by short precise direct repeats of 8 nucleotides in length.
ATTCACCA [ALU] (A)41 ATTCACCA shows the flanking nucleotide sequences of HS2.25. The composition of the 3' oligo (dA) tail is denoted by the appropriate nucleotide in parenthesis followed by the length in subscripts. The nucleotide sequences comprising the flanking direct repeats of each Alu element are in bold.
Sites within this locus ordered by their chromosomal position in the 37.3 NCBI build:
| Site Name |
(Navigates to ALFRED
|dbSNP rs# |
(Navigates to dbSNP
|HS2.25 Alu insertion||   ||39499638||27|
© 2012 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan