ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the U. S. National Science Foundation.
ALFRED detailed record information

Population Information

NameALFRED UIDPrimary LanguageLanguage Family
TuvaPO000387S

Synonyms: Tyva ; Tuvinian ; Tuvan ;
Geographic Location1:  54N, 88E; 49N, 99E  

Sites typed for this population: View List
Population Samples: See Sample Information
External Resources: 
References: See references
Population Description: Being curated
References:


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Kungurtug

Sample UID: SA000629R

Sample Description:This sample was collected from unrelated individuals from the Kungurtug settlement in the Republic of Tuva located in north central Asia.

Number of Chromosomes: 76

Relation to Other Samples:

References:
- Antunez-de-Mayolo G, Antunez-de-Mayolo A, Antunez-de-Mayolo P, Papiha SS, Hammer M, Yunis JJ, Yunis EJ, Damodaran C, de Pancorbo MM, Caeiro JL, Puzyrev VP, Herrera RJ. "Phylogenetics of worldwide human populations as determined by polymorphic Alu insertions". Electrophoresis 23:3346-3356. (2002) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Tuvinians

Sample UID: SA002849X

Sample Description:This sample consists of Tuvinians from the settlement of Bai-Taiga, the Tyva Republic.

Number of Chromosomes: 268

Relation to Other Samples:

References:
- Trifonova EA, Spiridonova MG, Stepanov VA "Genetic diversity and the structure of linkage disequilibrium in the methylenetetrahydrofolate reductase locus". Genetika. 44:1410-9.. (2008) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Tuvinians

Sample UID: SA002789A

Sample Description:This sample consists of Tuvinians from Kyzil. DNA samples were obtained from the DNA bank of the Research Institute of Medical Genetics in Tomsk, Russia. Blood samples were collected from volunteers for 15 years. The study was approved by the Institutional Review Board of the Research Institute of Medical Genetics (Tomsk, Russia). Written informed consent was obtained from the volunteers before blood sampling.

Number of Chromosomes: 176

Relation to Other Samples:

References:
- Makeeva O, Stepanov V, Puzyrev V, Goldstein DB, Grossman I "Global pharmacogenetics: genetic substructure of Eurasian populations and its effect on variants of drug-metabolizing enzymes". Pharmacogenomics. 9:847-68.. (2008) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Toora-Khem

Sample UID: SA000989A

Sample Description:This sample consists of individuals from the settlement of Toora-Khem, Republic of Tuva (Russia). This settlement is located in the difficult to access mountain region east of the Tuva Republic. The population of this settlement is represented by an isolated ethnographic group of Todja Tuvinians. Only unrelated individuals with confirmed attribution to Tuvinian ethnic group participated in this study.

Number of Chromosomes: 330

Relation to Other Samples:

References:
- Stepanov VA, Khitrinskaya IYu, Puzyrev VP. "Genetic Differentiation of the Tuva Population with Respect to the Alu Insertions". Russian Journal of Genetics 37:453-459. (2001) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Tuvinian

Sample UID: SA002498X

Sample Description:This sample consists of Tuvinians.

Number of Chromosomes: 100

Relation to Other Samples:

References:
- Stephens JC, Reich DE, Goldstein DB, Shin HD, Smith MW et.al. "Dating the origin of the CCR5-Delta32 AIDS-resistance allele by the coalescence of haplotypes". Am J Hum Genet. 62:1507-15. (1998) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Tuvinians

Sample UID: SA002812N

Sample Description:This sample consists of Tuvinians from Russia.

Number of Chromosomes: 102

Relation to Other Samples:

References:
- Borinskaya S, Kal'ina N, Marusin A, Faskhutdinova G, Morozova I, Kutuev I, Koshechkin V, Khusnutdinova E, Stepanov V, Puzyrev V, Yankovsky N, Rogaev E. "Distribution of the alcohol dehydrogenase ADH1B*47His allele in Eurasia". Am J Hum Genet. 84:89-92. (2009) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Tuvinians

Sample UID: SA002202G

Sample Description:This sample consists of Tuvinians from Tuva republic (Russia).

Number of Chromosomes: 100

Relation to Other Samples:

References:
- Aseev MV, Shawi A, Dean M, Baranov VS. "[Population features of gene mutation frequency of the CKR-5 receptor, determining sensitivity to the AIDS virus]". Genetika. 33:1724-6.. (1997) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Tyvans

Sample UID: SA002395T

Sample Description:This sample consists of Tyvians. The subjects for this study were the DNA samples from the collection of the Laboratory of Human Histocompatibility Genetics of the Institute of Immunology (Russia). Blood samples were taken from the unrelated anonymous volunteers who gave their informed consent. Data on the birthplace and ethnicity upto two generations were collected.

Number of Chromosomes: 192

Relation to Other Samples:

References:
- Kofiadi IA, Rebrikov DV, Trofimov DY, Alexeev LP, Khaitov RM "Allelic distribution of the CCR5, CCR2, and SDF1 gene polymorphisms associated with HIV-1/AIDS resistance in Russian populations". Dokl Biol Sci. 415:320-3. (2007) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Tuvinians

Sample UID: SA003088T

Sample Description:This sample consists of Tuvinians from the settlement of Bai-Taiga, the Tyva Republic.

Number of Chromosomes: 268

Relation to Other Samples:

References:
- Trifonova EA, Spiridonova MG, Stepanov VA "Genetic diversity and the structure of linkage disequilibrium in the methylenetetrahydrofolate reductase locus". Genetika. 44:1410-9. (2008) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Tuvan

Sample UID: SA002185Q

Sample Description:This sample consists of Tuvan individuals who inhabit the Altai-Sayan foothills (Kyzyl area).

Number of Chromosomes: 154

Relation to Other Samples:

References:
- Yudin NS, Vinogradov SV, Potapova TA, Naykova TM, Sitnikova VV, Kulikov IV, Khasnulin VI, Konchuk C, Vloschinskii PE, Ivanov SV, Kobzev VF, Romaschenko AG, Voevoda MI "Distribution of CCR5-delta 32 gene deletion across the Russian part of Eurasia". Hum Genet. 102:695-8.. (1998) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Kungurtug

Sample UID: SA000987Y

Sample Description:This sample consists of individuals from the settlement of Kungurtug, Republic of Tuva (Russia). This settlement is located in the southeast of the Republic, close to the Mongolian bordor. The Kungurtug population is characterized by geographical isolation and a high proportion of the descendants of the Mongolian tribes. Only unrelated individuals with confirmed attribution to Tuvinian ethnic group participated in this study.

Number of Chromosomes: 330

Relation to Other Samples:

References:
- Stepanov VA, Khitrinskaya IYu, Puzyrev VP. "Genetic Differentiation of the Tuva Population with Respect to the Alu Insertions". Russian Journal of Genetics 37:453-459. (2001) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Teeli

Sample UID: SA000988Z

Sample Description:This sample consists of individuals from the settlement of Teeli, Republic of Tuva (Russia). This settlement is located in the industrial western part of the Republic. It has good transport communications with other parts of the Republic. Only unrelated individuals with confirmed attribution to Tuvinian ethnic group participated in this study.

Number of Chromosomes: 258

Relation to Other Samples:

References:
- Stepanov VA, Khitrinskaya IYu, Puzyrev VP. "Genetic Differentiation of the Tuva Population with Respect to the Alu Insertions". Russian Journal of Genetics 37:453-459. (2001) Online citation.


1Geographic Coordinates represent two opposite corners of a rectangle encompassing the area where the population lives.This data is preliminary and changing.

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© 2012 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan