ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the U. S. National Science Foundation.
ALFRED detailed record information

Polymorphism Information

NameALFRED UIDLocus NameLocus Symbol
D1S80SI000567SD1S80D1S80
Synonyms:
Frequency on Map:    
Frequency Display Formats:     
Estimated Heterozygosity: 
Frequency Download:   
External Resources: GenBank sequence Record  CHLC markers Record  
References: See References
Polymorphism Description:  A hypervariable locus which consists of a repeat unit of 14 bp followed by repeat units of 16 bp.

Using number of repeats for allele nomenclature.
Alleles:
Allele NameAllele SymbolDescription
1010
1414
1515
1616
1717
1818
1919
2020
2121
2222
2323
2424
2525
2626
2727
27.827.8
2828
2929
3030
3131
3232
3333
3434
3535
3636
3737
3838
3939
4040
4141
4242
4343
4646
<14<14
>39>39
>40>40
>41>41
>>41>>41Larger allele with number of repeat units between 52 and 55.Ref:Kadasi etal(1995)

References:
- Budowle B, Chakraborty R, Giusti AM, Eisenberg AJ, Allen RC. "Analysis of the VNTR locus D1S80 by the PCR followed by high-resolution PAGE.". Am J Hum Genet. 48:137-44. (1991)
Online citation.

- Kadasi L, Bohusova T. "A new extremely large allele at the D1S80 (MCT118) locus". J Forensic Sci. 40:906-7. (1995) Online citation.

- Kasai K, Nakamura Y, White R. "Amplification of a variable number of tandem repeats (VNTR) locus (pMCT118) by the polymerase chain reaction (PCR) and its application to forensic science". J. Forensic Sci. 35:1196-200. (1990) Online citation.

- Zago MA, Silva WA, Tavella MH, Santos SEB, Guerreiro JF, Figueiredo MS "Interpopulational and Intrapopulational Genenetic Diversity of Amerindians as Revealed by Six Variable Number of Tandem Repeats". Human Heredity 46:274-289. (1996) Online citation.


© 2012 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan