ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the U. S. National Science Foundation.
ALFRED detailed record information

Polymorphism Information

NameALFRED UIDLocus NameLocus Symbol
MAPT07 STRPSI663751CMicrotubule-associated protein tau MAPT
Synonyms:
Frequency on Map:    
Frequency Display Formats:     
Estimated Heterozygosity: 
Frequency Download:   
External Resources: 
References: See References
Polymorphism Description:  This is a di nucleotide STRP in the 17q inversion region. The primers used for typing:
forward primer-TCAGATTCGGTTTCGGGGGTCGTTATCG
Reverse primer-GCTGGAGGGTCTTCACCACCAGATTCGC
The observed allele size for this polymorphism ranges between 201bp and 223bp.
Alleles:
Allele NameAllele SymbolDescription
15 (Number of repeats)201bpallele size in base pairs
16(Number of repeats)203bpallele size in base pairs
17(Number of repeats)205bpallele size in base pairs
18(Number of repeats)207bpallele size in base pairs
19(Number of repeats)209bpallele size in base pairs
20(Number of repeats)211bpallele size in base pairs
21(Number of repeats)213bpallele size in base pairs
22(Number of repeats)215bpallele size in base pairs
23(Number of repeats)217bpallele size in base pairs
24(Number of repeats)219bpallele size in base pairs
26(Number of repeats)223bpallele size in base pairs

References:
- Donnelly MP, Paschou P, Grigorenko3 E, Gurwitz D, Mehdi SQ, Kajuna SLB, Barta C, Kungulilo S, Karoma NJ, Lu R-B, Zhukova OB, Kim JJ,Comas D, Siniscalco M, New M, Li P, Li H, Manolopoulos VG, Speed WC, Rajeevan H, Pakstis AJ, Kidd JR, Kidd KK. "The Distribution and Most Recent Common Ancestor of the 17q21 Inversion in Humans. ". Am. J of Human Genetics 86:161-71. (2010)
Online citation.


© 2014 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan