ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the U. S. National Science Foundation.
ALFRED detailed record information

Population Information

NameALFRED UIDPrimary LanguageLanguage Family
ScotPO000496T

Synonyms: Scottish ; Scotsman ; Scotswoman ;
Geographic Location1:  59.5N, 7.5W; 54.5N, 1.5W  

Sites typed for this population: View List
Population Samples: See Sample Information
External Resources: 
References: See references
Population Description: Being Curated
References:


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Edinburgh

Sample UID: SA002749W

Sample Description:This sample consists of individuals from Edinburgh, Scotland who were part of multicenter case-conrol study conducted from 2002-2005 in 12 centres from 8 European countries. This study is called ARCAGE (Alcohol-related Cancers and genetic susceptibility in Europe). All participants were interviewed with a structured questionnaire.

Number of Chromosomes: 102

Relation to Other Samples:

References:
- Hashibe M, McKay JD, Curado MP, Oliveira JC, Koifman S, Koifman R, Zaridze D, Shangina O, Wünsch-Filho V, Eluf-Neto J, Levi JE, Matos E, Lagiou P, Lagiou A, Benhamou S et.al. "Multiple ADH genes are associated with upper aerodigestive cancers". Nat Genet. 40:707-9. (2008) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Grampian

Sample UID: SA003338R

Sample Description:This sample consists of Scottish individuals.

Note: This sample information is not fully curated. For additional information about the sample, consult the publications under "References". The sample was entered as part of data submission by Eisenberg DA.

Number of Chromosomes: 800

Relation to Other Samples:

References:
- Cumming AM, Robertson FW. "Polymorphism at the apoprotein-E locus in relation to risk of coronary disease". Clin Genet. 25:310-3.. (1984) Online citation.

- Eisenberg DA, Kuzawa, CW, Hayes MG "Worldwide allele frequencies of the human apolipoprotein E (APOE) gene: climate, local adaptations and evolutionary history". American Journal of Physical Anthropology 143:100-11. (2010) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Scottish

Sample UID: SA001048N

Sample Description:This sample consists of unrelated Caucasians from the Strathclyde region in the west of Scotland (United Kingdom). The samples were supplied by the Glasgow Blood Centre.

Number of Chromosomes: 504

Relation to Other Samples:

References:
- Goodwin W, Scoular C, Linacre A. "13 STR loci frequency data from a Scottish population". Forensic Sci Int. 116:187-188. (2001) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Grampian

Sample UID: SA003350L

Sample Description:This sample consists of Scots.

Note: This sample information is not fully curated. For additional information about the sample, consult the publications under "References". The sample was entered as part of data submission by Eisenberg DA.

Number of Chromosomes: 200

Relation to Other Samples:

References:
- Eisenberg DA, Kuzawa, CW, Hayes MG "Worldwide allele frequencies of the human apolipoprotein E (APOE) gene: climate, local adaptations and evolutionary history". American Journal of Physical Anthropology 143:100-11. (2010) Online citation.

- Wilson HM, Patel JC, Russell D, Skinner ER. "Alterations in the concentration of an apolipoprotein E-containing subfraction of plasma high density lipoprotein in coronary heart disease". Clin Chim Acta. 220:175-87.. (1993) Online citation.


1Geographic Coordinates represent two opposite corners of a rectangle encompassing the area where the population lives.This data is preliminary and changing.

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© 2012 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan