ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the U. S. National Science Foundation.
ALFRED detailed record information

Locus Information

NameALFRED UIDLocus SymbolChromosomeBand Position
Alcohol Dehydrogenase 7 (class IV), mu or sigma polypeptide LO000229NADH744q23-q24
Synonyms: ADH-4 ;
Sites List: See Sites List
External Resources: Entrez Gene Locus Information   OMIM description   GenBank sequence    UniGene   PharmGKB Gene Information   Genopedia (HuGE Navigator)   
References: See References
Locus Description: The Class V Alcohol Dehydrogenase (ADH) gene ADH7. The entire family of ADH genes are listed separately as "Alcohol Dehydrogenase Gene family" (LO000381M).
Sites within this locus ordered by their chromosomal position in the 37.3 NCBI build:
Site Name
(Navigates to ALFRED
description)		dbSNP rs#
(Navigates to dbSNP
reference page)		Chr-PositionStatus# Populations
typed
C___2688538_10rs1789924   100274286Now associated with ADH1C75
E_rs2165671_10rs1154435    100285148Now associated with rs115443540
E_rs4513578_10rs1121534   100295415Now associated with rs112153463
Ers10017136_10rs10017136   100298681Now associated with rs1001713676
C__11349382_10rs10516439   100303158Now associated with rs1051643977
E_rs2646012rs2646012   100307788Now associated with rs264601262
ADH7 Gene LI SNPs 3-site haplotypers2851017   1003139960
E_rs1442487_10rs1442487   100314538Now associated with rs144248778
E_rs1583977_10rs1583977   100319762Now associated with rs158397751
Ers17028973_10rs17028973   100322786Now associated with rs1702897363
C__11349421_10rs2083687   100327337Now associated with rs208368762
rs7663410rs7663410   10032958650
C___8933988_10rs969804   10032969355
rs284793rs284793   10033029450
rs284792rs284792   10033030950
3' downstream Bfa Irs729147   10033326797
rs3805331rs3805331   10033393250
C____714911_1_rs284786   10033397774
C___1492617_1_ intron 8rs284784   10033587475
C_16129902 intron 8rs2851011   10033598377
4-site downstream haplotype   10033598340
rs1154454rs1154454   10033834288
rs1154455rs1154455    10033865755
rs1154456rs1154456   10033959650
intron 6 StyIrs1154458   10034052282
C/T SNPrs17529377   1003405866
rs1154460rs1154460   10034164351
C__25628233_30rs59534319   10034183940
C__11942306_1_ exon 6 Hinf Irs971074   100341861106
Gly92Alars1573496   10034966980
C___8934015_1_rs1154469   10035617997
7-site haplotype   10035617940
3-site upstream haplotype   10035617940
E__ADH7TATA_10rs17537595   10035646644
rs1154476rs1154476   10036072750

References:
- Osier MV, Pakstis AJ, Soodyall H, Comas D, Goldman D, Odunsi A, Okonofua F, Parnas J, Schulz LO, Bertranpetit J, Bonne-Tamir B, Lu RB, Kidd JR, Kidd KK. "A global perspective on genetic variation at the ADH genes reveals unusual patterns of linkage disequilibrium and diversity". Am J Hum Genet 71:84-99. (2002) Online citation.

- Osier MV. "Genetic Variation and Linkage Disequilibrium in the Human Alcohol Dehydrogenase Genes". Dissertation, Yale University (2002)

Top

© 2012 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan