ALFRED: allele frequency database

The ALlele FREquency Database
ALFRED is a resource of gene frequency data on human populations
supported by the U. S. National Science Foundation.

ALFRED detailed record information

Locus Information

Name	ALFRED UID	Locus Symbol	Chromosome	Band Position
Coagulation factor XIII, A1 polypeptide	LO000327M	F13A1	6	6p24.3-p25

Synonyms: F13A ; FXIIIA ; Factor XIIIA ;
Sites List: See Sites List
External Resources: Entrez Gene Locus Information OMIM description GenBank sequence GenBank sequence PharmGKB Gene Information Genopedia (HuGE Navigator)
References: See References
Locus Description: Being curated.
Sites within this locus ordered by their chromosomal position in the 37.3 NCBI build:

Site Name (Navigates to ALFRED description)	dbSNP rs# (Navigates to dbSNP reference page)	Chr-Position	# Populations typed
SE30 Tetranucleotide STRP		0	49
rs7772158	rs7772158	6139569	50
D6S477 (TCTA) _n tetranucleotide repeat	rs113821764	6140539	2
rs3024486	rs3024486	6145409	50
rs1050783	rs1050783	6145692	51
rs3024461	rs3024461	6146303	50
rs3778361	rs3778361	6150122	50
rs3799563	rs3799563	6150738	50
rs4282440	rs4282440	6151292	50
rs3024459	rs3024459	6151819	51
rs13213508	rs13213508	6152555	50
rs13206518	rs13206518	6153002	50
rs9392751	rs9392751	6153989	51
rs13200015	rs13200015	6156327	50
rs2326708	rs2326708	6157957	51
rs381061	rs381061	6158149	50
rs4960171	rs4960171	6159049	51
rs6927469	rs6927469	6161109	50
rs9392752	rs9392752	6161432	50
rs6911594	rs6911594	6163088	51
rs13202850	rs13202850	6163492	50
rs434602	rs434602	6165468	50
rs440330	rs440330	6165782	50
rs922866	rs922866	6165834	50
rs3024452	rs3024452	6166532	50
rs435048	rs435048	6167621	50
rs900401	rs900401	6168194	50
rs3823193	rs3823193	6169218	51
rs7769202	rs7769202	6169656	50
rs1609584	rs1609584	6170449	50
rs755656	rs755656	6171672	50
rs406238	rs406238	6172302	51
rs786735	rs786735	6173987	50
rs5982	rs5982	6174866	51
rs3024444	rs3024444	6175174	51
rs407447	rs407447	6175591	50
rs11969912	rs11969912	6175975	50
rs12210959	rs12210959	6176144	50
rs7774391	rs7774391	6176625	50
rs3778354	rs3778354	6177044	50
rs3116567	rs3116567	6178328	51
rs3778353	rs3778353	6179882	50
rs9502422	rs9502422	6180706	50
rs3024443	rs3024443	6181526	51
rs2274393	rs2274393	6182605	51
rs373695	rs373695	6184352	50
rs3799558	rs3799558	6184819	51
rs3823191	rs3823191	6194967	50
rs11964160	rs11964160	6195060	50
rs5978	rs5978	6196141	50
rs4959374	rs4959374	6199882	51
rs6924490	rs6924490	6200875	51
rs7746985	rs7746985	6201515	50
rs1482868	rs1482868	6202734	51
rs9392757	rs9392757	6204341	50
rs2085575	rs2085575	6205842	50
rs3024422	rs3024422	6211419	51
rs1993552	rs1993552	6220029	51
rs3024419	rs3024419	6221930	50
rs3024415	rs3024415	6222737	50
rs3024409	rs3024409	6223294	51
rs1742928	rs1742928	6226951	50
rs1742930	rs1742930	6228406	51
rs6906048	rs6906048	6229026	50
rs13217372	rs13217372	6238595	50
rs17376901	rs17376901	6242593	50
rs1742924	rs1742924	6242946	51
rs1613671	rs1613671	6244124	50
rs1267843	rs1267843	6246984	50
rs17141887	rs17141887	6247901	50
rs3024391	rs3024391	6249276	51
rs3024390	rs3024390	6249300	50
rs3024389	rs3024389	6249620	51
rs3024388	rs3024388	6249645	51
rs3024387	rs3024387	6249702	50
rs3024377	rs3024377	6250501	50
rs3024370	rs3024370	6250967	50
rs6597197	rs6597197	6253017	50
rs9379022	rs9379022	6255851	51
rs7766109	rs7766109	6256833	51
rs9504738	rs9504738	6258630	50
rs3901123	rs3901123	6260749	51
rs13204446	rs13204446	6263242	50
rs10484322	rs10484322	6265194	51
rs3024358	rs3024358	6267304	51
rs17374745	rs17374745	6271062	50
rs10484323	rs10484323	6272186	51
rs3863222	rs3863222	6274084	51
rs3851513	rs3851513	6274161	51
rs3851514	rs3851514	6274570	51
rs12529193	rs12529193	6274639	50
rs9328347	rs9328347	6274947	51
rs9328348	rs9328348	6275932	51
rs4959377	rs4959377	6280288	51
rs9405911	rs9405911	6282778	50
rs12664620	rs12664620	6282943	50
rs749005	rs749005	6283666	50
rs9502429	rs9502429	6284125	50
rs1993553	rs1993553	6286854	51
rs6906354	rs6906354	6287616	50
rs1267914	rs1267914	6289857	50
rs11243069	rs11243069	6290003	51
rs3024355	rs3024355	6292229	50
rs9504743	rs9504743	6294059	51
rs7755951	rs7755951	6303409	50
rs1742932	rs1742932	6304531	50
rs2295753	rs2295753	6305477	51
rs714408	rs714408	6306405	51
rs17378819	rs17378819	6307443	50
rs2755416	rs2755416	6311701	51
rs3024342	rs3024342	6314643	51
rs11243078	rs11243078	6316802	51
rs3024321	rs3024321	6318126	51
rs5985	rs5985	6318795	51
rs3024471	rs3024471	6319535	51
rs2815822	rs2815822	6320808	50
rs3024304	rs3024304	6322875	51
rs1267858	rs1267858	6322978	50
rs17379383	rs17379383	6323420	50
F13A1 (AAAG)_n tetranucleotide repeat			75

References:
- Bogdawa HM, Hutz MH, Salzano FM, Weimer TA. "Diversity of Two Short Tandem Repeat Loci (CD4 and F13A1) in Three Brazilian Ethnic Groups". Hum. Biol. 72:1045-1053. (2000) Online citation.

- Da Silva WA Jr, Bortolini MC, Meyer D, Salzano FM, Elion J, Krishnamoorthy R, Schneider MP, De Guerra DC, Layrisse Z, Castellano HM, Weimer TD, Zago MA. "Genetic diversity of two African and sixteen South American populations determined on the basis of six hypervariable loci.". Am. J. Phys. Anthropol. 109:425-437. (1999) Online citation.

- Parra E, Saha N, Soemantri AG, McGarvey ST, Hundrieser J, Shriver MD, Deka R. "Genetic Variation at 9 autosomal Microsatellite Loci in Asian and Pacific Populations". Hum. Biol. 71:757-779. (1999) Online citation.

- Sala A, Penacino G, Corach D. "Comparison of allele frequencies of eight STR loci from Argentinian Amerindian and European populations". Hum. Biol. 70:937-47. (1998) Online citation.

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© 2012 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan