ALFRED: allele frequency database

The ALlele FREquency Database
ALFRED is a resource of gene frequency data on human populations
supported by the U. S. National Science Foundation.

ALFRED detailed record information

Locus Information

Name	ALFRED UID	Locus Symbol	Chromosome	Band Position
Calcium channel, voltage-dependent, alpha 1E subunit	LO005498A	CACNA1E	1	1q25-q31

Synonyms:
Sites List: See Sites List
External Resources: Entrez Gene Locus Information Genopedia (HuGE Navigator)
References: See References
Locus Description: calcium channel, voltage-dependent, alpha 1E subunit
Sites within this locus ordered by their chromosomal position in the 37.3 NCBI build:

Site Name (Navigates to ALFRED description)	dbSNP rs# (Navigates to dbSNP reference page)	Chr-Position	# Populations typed
rs556321	rs556321	181453509	51
rs12060765	rs12060765	181459760	50
rs943795	rs943795	181462926	51
rs16857428	rs16857428	181466940	50
rs12070246	rs12070246	181467687	50
rs595752	rs595752	181468084	50
rs3856088	rs3856088	181468489	50
rs576006	rs576006	181473020	51
rs558994	rs558994	181477525	51
rs17494681	rs17494681	181480183	70
rs4126690	rs4126690	181484543	50
rs517209	rs517209	181488212	51
rs4126689	rs4126689	181488270	51
rs589082	rs589082	181489167	50
rs10910948	rs10910948	181493767	50
rs593863	rs593863	181494739	50
rs16857509	rs16857509	181494775	50
rs593080	rs593080	181494858	50
rs625226	rs625226	181500324	70
rs4146634	rs4146634	181503903	51
rs2225875	rs2225875	181506539	51
rs6681017	rs6681017	181508326	51
rs1933049	rs1933049	181510739	51
rs12024842	rs12024842	181513867	51
rs4652663	rs4652663	181516101	50
rs13375076	rs13375076	181516185	50
rs11580052	rs11580052	181517608	50
rs7524309	rs7524309	181517638	50
rs10797724	rs10797724	181518125	50
rs6676111	rs6676111	181519355	50
rs2332429	rs2332429	181525755	50
rs17495655	rs17495655	181526354	50
rs16857648	rs16857648	181526369	69
rs10910957	rs10910957	181528472	50
rs12755303	rs12755303	181528555	50
rs10910958	rs10910958	181529199	50
rs1574781	rs1574781	181534471	51
rs7534818	rs7534818	181538177	50
rs10797729	rs10797729	181539747	50
rs10797730	rs10797730	181541159	50
rs1999838	rs1999838	181541353	54
rs12135959	rs12135959	181545124	50
rs3856090	rs3856090	181548788	50
rs10494540	rs10494540	181549547	70
rs10494541	rs10494541	181550465	51
rs12138634	rs12138634	181550783	50
rs12239392	rs12239392	181553070	69
rs2877652	rs2877652	181553797	51
rs6684423	rs6684423	181560367	50
rs3856094	rs3856094	181561783	69
rs4652667	rs4652667	181562198	69
rs10797733	rs10797733	181568770	51
rs12121075	rs12121075	181572721	50
rs7523997	rs7523997	181575552	50
rs199960	rs199960	181579231	51
rs4271174	rs4271174	181582350	51
rs16857808	rs16857808	181586946	50
rs199937	rs199937	181594465	50
rs199939	rs199939	181595979	51
rs199943	rs199943	181598400	50
rs12071300	rs12071300	181599089	50
rs175338	rs175338	181605165	51
rs199955	rs199955	181612041	50
rs10910977	rs10910977	181612753	50
rs4083386	rs4083386	181622824	51
rs199979	rs199979	181624765	50
rs6680280	rs6680280	181629618	51
rs12139532	rs12139532	181631248	51
rs199916	rs199916	181635954	51
rs3820260	rs3820260	181638511	51
rs3766980	rs3766980	181643711	51
rs3753737	rs3753737	181645227	51
rs3845441	rs3845441	181655752	50
rs3766988	rs3766988	181667283	70
rs7513540	rs7513540	181672682	69
rs3845444	rs3845444	181674891	63
rs4306091	rs4306091	181676716	51
rs2253388	rs2253388	181686749	51
rs12139677	rs12139677	181703276	51
rs3845445	rs3845445	181706201	50
rs3767002	rs3767002	181713944	50
rs16858051	rs16858051	181714184	50
rs3753748	rs3753748	181715146	50
rs3767004	rs3767004	181717047	50
rs704332	rs704332	181719679	51
rs704329	rs704329	181727273	51
rs697260	rs697260	181730226	51
rs199922	rs199922	181735033	51
rs199923	rs199923	181735044	50
rs2280868	rs2280868	181741811	51
rs199933	rs199933	181747349	51
rs473200	rs473200	181754803	70
rs704326	rs704326	181759657	51
rs4282766	rs4282766	181760749	50
rs3845446	rs3845446	181766437	79
rs3753752	rs3753752	181766530	63
rs638132	rs638132	181768985	51
rs590412	rs590412	181771834	51
rs12045458	rs12045458	181771992	50

References:
- Shriver MD, Mei R, Parra EJ, Sonpar V, Halder I, Tishkoff SA, Schurr TG, Zhadanov SI, Osipova LP, Brutsaert TD, Friedlaender J, Jorde LB, Watkins WS, Bamshad MJ, Gutierrez G, Loi H, Matsuzaki H, Kittles RA, Argyropoulos G, Fernandez JR, Akey JM, Jones KW. "Large-scale SNP analysis reveals clustered and continuous patterns of human genetic variation". Hum Genomics. 2:81-89. (2005) Online citation.

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© 2012 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan