ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the U. S. National Science Foundation.
ALFRED detailed record information

Polymorphism Information

NameALFRED UIDLocus NameLocus Symbol
intergenic region StyI SI000761Ors4648321 is intergenic between LOC100288346 and TTC12rs4648321
Previously associated with :  NCAM1
FstAvg Het# Populations Typed
0.0980.32454
Synonyms: rs4648321 ;
Frequency on Map:    
Frequency Display Formats:     
Estimated Heterozygosity: 
Frequency Download:   
External Resources: GenBank sequence Record   Typing Protocol Record  dbSNP ss# Record  PharmGKB Variant Information Record  
References: See References
Polymorphism Description:  A G/A SNP altering a StyI restriction site. This polymorphism is located in intergenic region of LOC643169 and TTC12.
Ancestral Allele:  A
Alleles:
Allele NameAllele SymbolDescription
StyI Site AbsentG5'-caaagacccctca CC G TGG atgctggagctg-3'
StyI Site PresentA5'-caaagacccctca CC A TGG atgctggagctg-3'

References:
- Sawyer SL, Mukherjee N, Pakstis AJ, Feuk L, Kidd JR, Brookes AJ, Kidd KK. "Linkage disequilibrium patterns vary substantially among populations". Eur J Hum Genet 13:677-686. (2005) Online citation.

© 2012 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan