ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the U. S. National Science Foundation.
ALFRED detailed record information

Polymorphism Information

NameALFRED UIDLocus NameLocus Symbol
7-Site haplotypeSI001217Lb-globin gene clusterHBB@
Synonyms:
Frequency on Map:    
Frequency Display Formats:     
Estimated Heterozygosity: 
Frequency Download:   
External Resources: 
References: See References
Polymorphism Description:  The 7 sites ordered from 5¿ to 3¿ are
Hinc II site 5¿ to HBE1(hemoglobin, epsilon 1)gene (UID=SI001219N)
Hind III site in HBG2(hemoglobin, gamma G)gene (UID=SI001220F)
Hind III site in HBG1(hemoglobin, gamma A)gene (UID=SI001221G)
Hinc II site in HBBP1 (hemoglobin, beta pseudogene 1) (UID=SI000810J)
Hinc II site 3¿ to HBBP1 (hemoglobin, beta pseudogene 1) (UID=SI000811K)
Ava II site in HBB (hemoglobin, beta) gene (UID=SI001223I)
BamHI site 3¿ to HBB (hemoglobin, beta) gene.(UID=SI001224J)

The alleles are described as ¿+¿ for site present and ¿-¿ for site absent.


Alleles:
Allele NameAllele SymbolDescription
+/+/+/-/+/-/++/+/+/-/+/-/+
+/+/+/-/+/-/-+/+/+/-/+/-/-
+/+/+/-/-/-/++/+/+/-/-/-/+
+/+/-/+/+/+/++/+/-/+/+/+/+
+/+/-/+/+/+/-+/+/-/+/+/+/-
+/+/-/+/+/-/++/+/-/+/+/-/+
+/+/-/-/+/+/++/+/-/-/+/+/+
+/+/-/-/+/-/++/+/-/-/+/-/+
+/+/-/-/-/+/-+/+/-/-/-/+/-
+/+/-/-/-/-/++/+/-/-/-/-/+
+/-/+/+/+/-/++/-/+/+/+/-/+
+/-/+/-/-/-/++/-/+/-/-/-/+
+/-/-/+/+/+/-+/-/-/+/+/+/-
+/-/-/+/+/-/++/-/-/+/+/-/+
+/-/-/+/-/+/-+/-/-/+/-/+/-
+/-/-/-/+/+/++/-/-/-/+/+/+
+/-/-/-/+/+/-+/-/-/-/+/+/-
+/-/-/-/+/-/++/-/-/-/+/-/+
+/-/-/-/-/+/++/-/-/-/-/+/+
+/-/-/-/-/+/-+/-/-/-/-/+/-
+/-/-/-/-/-/++/-/-/-/-/-/+
-/+/+/+/+/+/+-/+/+/+/+/+/+
-/+/+/-/+/+/+-/+/+/-/+/+/+
-/+/+/-/+/+/--/+/+/-/+/+/-
-/+/+/-/+/-/+-/+/+/-/+/-/+
-/+/+/-/-/-/+-/+/+/-/-/-/+
-/+/-/+/+/+/+-/+/-/+/+/+/+
-/+/-/+/+/+/--/+/-/+/+/+/-
-/+/-/+/+/-/+-/+/-/+/+/-/+
-/+/-/+/+/-/--/+/-/+/+/-/-
-/+/-/+/-/+/+-/+/-/+/-/+/+
-/+/-/+/-/+/--/+/-/+/-/+/-
-/+/-/-/+/+/+-/+/-/-/+/+/+
-/+/-/-/+/+/--/+/-/-/+/+/-
-/+/-/-/+/-/+-/+/-/-/+/-/+
-/+/-/-/-/+/+-/+/-/-/-/+/+
-/+/-/-/-/+/--/+/-/-/-/+/-
-/-/+/-/-/-/+-/-/+/-/-/-/+
-/-/-/+/+/+/+-/-/-/+/+/+/+
-/-/-/+/+/+/--/-/-/+/+/+/-
-/-/-/+/+/-/+-/-/-/+/+/-/+
-/-/-/-/+/+/+-/-/-/-/+/+/+
-/-/-/-/+/-/+-/-/-/-/+/-/+
-/-/-/-/-/+/+-/-/-/-/-/+/+
-/-/-/-/-/+/--/-/-/-/-/+/-
-/-/-/-/-/-/+-/-/-/-/-/-/+

References:
- Koji S and Shinji H. "Re-evaluation of the β-globin gene cluster haplotypes in Japanese, Koreans, and three Colombian Amerinds (Wayuu, Kamsa, and Inga tribes) ". Anthropological Science 112:109-114. (2004)

© 2012 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan