ALFRED: allele frequency database

The ALlele FREquency Database
ALFRED is a resource of gene frequency data on human populations
supported by the U. S. National Science Foundation.

ALFRED detailed record information

Polymorphism Information

Name	ALFRED UID	Locus Name	Locus Symbol
MAPT08 STRP	SI663752D	Microtubule-associated protein tau	MAPT

Synonyms:
Frequency Display Formats:

Estimated Heterozygosity:

Frequency Download:

External Resources:
References: See References
Polymorphism Description: This is a tetra nucleotide STRP in the 17q inversion region. The primers used for typing:
forward primer-CAATGAGCCAAGATCACACCTACTG
Reverse primer-GGGTCCTATCATTCTCTCTGCTATCA
The observed allele size for this polymorphism ranges between 187bp and 211bp.
Alleles:

Allele Name	Allele Symbol	Description
10(Number of repeats)	199bp	allele size in base pairs
11(Number of repeats)	203bp	allele size in base pairs
12(Number of repeats)	207bp	allele size in base pairs
13(Number of repeats)	211bp	allele size in base pairs
7 (Number of repeats)	187bp	allele size in base pairs
8(Number of repeats)	191bp	allele size in base pairs
9(Number of repeats)	195bp	allele size in base pairs

References:
- Donnelly MP, Paschou P, Grigorenko3 E, Gurwitz D, Mehdi SQ, Kajuna SLB, Barta C, Kungulilo S, Karoma NJ, Lu R-B, Zhukova OB, Kim JJ,Comas D, Siniscalco M, New M, Li P, Li H, Manolopoulos VG, Speed WC, Rajeevan H, Pakstis AJ, Kidd JR, Kidd KK. "The Distribution and Most Recent Common Ancestor of the 17q21 Inversion in Humans. ". Am. J of Human Genetics 86:161-71. (2010) Online citation.

© 2012 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan