|Population Name||Sample Name||ALFRED UID||Number of Chromosomes|
Subset of SA000028K
Estimated heterozygosities for various sites:
Sample Description: This sample is part of the Human Genome Diversity Cell Line Panel collected by the Human Genome Diversity Project (HGDP) and the Foundation Jean Dausset (CEPH).
The sample was collected in the Karitiana village (Rondonia Province, Brazil) by F. Black. HLA haplotypes indicate that the Karitiana have no non-Amerindian admixture and are genetically distinct from other sampled populations in relative geographical proximity, such as the Surui.
Note: In many publications subset H952 of the HGDP panel (with first and second degree relatives excluded from the original set)/ H971 subset with only the first degree relatives excluded was typed and for this population that decreases the sample size from 24 to14 individuals.
- Rosenberg NA, Pritchard JK, Weber JL, Cann HM, Kidd KK, Zhivotovsky LA, Feldman MW. "Genetic structure of human populations". Science 298:2381-2385. (2002) Online citation.
- Rosenberg NA. "Standardized subsets of the HGDP-CEPH Human Genome Diversity Cell Line Panel, accounting for atypical and duplicated samples and pairs of close relatives.". Ann Hum Genet. 70:841-847. (2006) Online citation.
© 2012 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan