ALFRED
      The ALlele FREquency Database   
A resource of gene frequency data on human populations
supported by the U. S. National Science Foundation.

Fst and Average Heterozygosity Values for Biallelic Sites

Select a button to view sites from that chromosome.

                                                                                                                                          
Chromosome 1
LocusSitedbSNP rs#FstAvg Het# Pops
ABCA4rs546550rs5465500.1110.29414
rs952499rs9524990.0350.47614
rs545542rs5455420.1040.29414
rs538880rs5388800.0660.31814
ACADMintron 10 BamHI rs46469610.0780.28837
C___8367929_10rs11465740.2030.32740
rs8763rs87630.0950.16943
rs1146581rs11465810.1960.33343
C___8367965_1_rs11465720.1650.23740
intron 5 SacI rs21531260.0840.30937
intron 7 TaqI rs46469600.1240.23633
ACBD6rs1418102rs14181020.0910.30914
ADARrs2335230rs23352300.1090.28214
ADIPOR1rs2185781rs21857810.1270.30414
AGBL4rs1079130rs10791300.0730.45814
rs320039rs3200390.2040.15514
rs726814rs7268140.1020.22214
rs3118225rs31182250.080.45614
rs1934369rs19343690.090.42514
rs1934393rs19343930.1510.41614
AGT(4527)A/Grs115680340.0660.01314
(-6)C/Trs50510.210.31353
(-217)A/Grs50490.0490.28215
(+68)C/T rs21485820.2070.35314
(-1178)A/Grs111225800.0330.2614
(-1074)G/Trs20714040.0380.26614
(-829)A/T rs115680190.040.02514
(-812)G/Trs75338030.1320.04214
(-775)C/Trs20714060.0680.23814
(-792)A/Grs20714050.0430.25914
(-604)C/Grs50450.0420.0114
(-532)C/Trs50460.040.21514
(-385)A/Grs50470.020.00314
(-260)A/Grs50480.0180.00614
(13073)G/T rs168523520.1610.20514
(12821)A/Grs9435800.1840.34914
(12685)A/Grs111225730.0260.00814
(12651)C/Trs9435810.0180.00614
(12428)C/Trs108647700.1910.19414
(12193)A/Crs108647710.1910.19414
(12057)A/Grs111225740.1830.18414
(11750)C/Trs115680460.060.08414
(11607)C/Trs20678530.1350.26352
(11534)A/Crs70790.1170.28414
(-152)A/Grs115680200.0490.0714
(172)A/Grs37896790.1180.2552
(266)T/Grs115680490.0310.00914
(384)T/Crs37896780.0910.30214
(409)T/Crs38277500.1420.30914
(507)T/Crs24931340.1850.36914
(515)A/Grs115680210.0260.00414
(676)T/Crs75390200.160.40114
(698)T/Crs75390130.160.40114
(770)C/Trs10784990.1290.40152
(1035)A/Grs38897280.1540.36914
exon 2 T/Csup704/sup (also known as M235T)rs6990.2130.32457
(4481)A/Crs75433160.030.01714
Thr174Metrs47620.3010.18915
(-20)G/Trs50500.0250.28915
(1164)A/Grs20047760.2010.39914
(1257)T/Crs115680220.1780.0314
(1347)T/Crs115680230.0390.00614
(1851)A/Grs115680250.0660.06114
(1713)G/Trs115680240.0950.0414
(11401)G/Trs50440.0590.0214
(11145)C/Trs50430.1060.02514
(11136)G/Crs47530.0610.03414
(11018)C/Trs50420.0270.00414
(10382)A/Crs115680450.1760.07914
(10044)A/Grs115680440.0580.06214
(9769)A/Grs19267230.1540.2152
(9668)G/Trs19267220.1850.1914
(9596)C/Trs111225750.1970.19414
(8923)A/Grs24931290.0890.09714
(8862)A/Grs108647720.2090.39114
(8356)C/Trs24785230.1980.39714
(8306)A/Grs38277490.0820.39714
(8304)C/Trs115680420.1850.08114
(8178)A/Grs24785220.0620.05414
(7886)C/Trs115680400.1050.02614
(7502)C/Trs115680390.0460.01114
(7368)A/Grs115680560.2010.19714
(7024)A/Grs24931300.0710.07614
(6626G/T)rs121255520.0180.00614
(2077)C/Trs111225780.1690.214
(2180)A/Crs13268830.1530.23614
(2310)G/Trs111225770.0430.23714
(2343)C/Trs115680260.2110.06714
(2420)A/Grs115680270.0250.00814
(2593)A/Grs115680500.0510.02214
(2622)G/Ars115680280.1820.18614
(2722)C/Trs115680510.020.00314
(2951)A/Trs115680290.0960.02414
(3023)A/Grs115680300.0180.00614
(6441)C/Trs37896640.0440.06714
(6427)G/Crs37896660.0610.39314
(6419)A/Grs37896670.0620.3914
(6360)C/Trs24931310.0950.09814
(6308)C/Trs24931320.0760.46114
(6232)G/Ars37896690.10.39552
(6151)C/Trs37896700.0440.24114
(6065)G/Trs37896710.1270.39414
(5877)T/Grs37896720.020.00314
(5744)C/Trs24785450.0580.42514
(3187)A/Grs111225760.190.19514
Val91Valrs115680520.020.00314
Glu98Lysrs115680320.0520.01314
Ala110Alars50400.0440.00614
(3679)A/Grs348292180.020.00314
Leu244Argrs50410.0260.00414
(4219)A/Grs115680330.0970.02514
(4295)C/Trs287307480.0580.04214
(5669)C/Grs24785440.0460.38814
(5485)A/Grs37896770.0180.00614
(5555)A/Grs24785430.1610.35214
(5592)C/Trs24931330.150.36214
(5259)A/Grs115680550.030.02314
(5175)A/Grs115680350.0830.03114
(5093)A/Crs24785390.1580.36514
(4873)C/Trs66873600.0890.45514
AHDC1rs4908343rs49083430.4150.28645
AKR7A3rs2013249rs20132490.2160.37714
ALPLrs950922rs9509220.1040.32514
ALU-HS2.43HS2.43 Alu insertion0.0680.06471
ALU-HS4.14HS4.14 Alu insertion0.1630.39160
ALU-Ya5NBC159Ya5NBC159 Alu insertion0.2020.11225
ALU-Ya5NBC237Ya5NBC237 Alu insertion0.2050.06725
ANKRD38rs2366208rs23662080.0650.23614
ARHGAP29rs1411698rs14116980.0840.40214
ARHGEF11rs950488rs9504880.1080.28814
rs950487rs9504870.0610.46814
ASB17rs10873804rs108738040.2370.35643
rs11161887rs111618870.1030.4444
rs3795251rs37952510.1720.39644
rs931507rs9315070.1050.29444
ATF3rs4951629rs49516290.250.24245
ATF6rs957862rs9578620.2330.36714
ATG4Crs2886770rs28867700.1980.36414
ATP1A1rs1407716rs14077160.4030.23614
ATP2B4rs1419114rs14191140.1930.24714
rs2032018rs20320180.0930.42714
ATPAF1rs1933932rs19339320.1970.23514
rs724309rs7243090.2330.28814
rs1273237rs12732370.190.27914
BAT2D1rs764206rs7642060.0670.41414
BCAR3rs236335rs2363350.3020.19914
C1QArs665691rs6656910.1320.39314
C1orf102rs2153337rs21533370.1310.43314
C1orf107rs616544rs6165440.1080.44614
C1orf110rs2175256rs21752560.1380.22214
C1orf125rs1410591rs14105910.0960.43414
rs1410592rs14105920.0910.43714
rs1410590rs14105900.1010.16414
C1orf151rs728611rs7286110.2040.36314
C1orf161rs1775700rs17757000.2630.35414
C1orf164rs1890948rs18909480.0570.33214
rs270703rs2707030.1590.34814
C1orf168rs1156845rs11568450.0950.2314
C1orf177rs141014rs1410140.1680.32214
C1orf181rs1775986rs17759860.060.15114
C1orf190rs953070rs9530700.110.40714
C1orf24rs689157rs6891570.1240.39414
C1orf26rs951428rs9514280.0630.38414
rs950327rs9503270.0550.41414
C1orf32rs2013526rs20135260.1780.4117
C1orf67rs1905116rs19051160.0840.30514
rs1506072rs15060720.0820.42214
rs1506069rs15060690.3960.28914
C1orf83rs950397rs9503970.1430.14214
C1orf94rs899379rs8993790.1350.10714
C1orf94 rs722652rs7226520.2370.34914
rs719768rs7197680.0910.38414
rs719769rs7197690.10.21114
C8Brs622904rs6229040.1470.3814
rs725330rs7253300.140.40614
CACHD1rs596504rs5965040.4370.21314
CACNA1Ers3753752rs37537520.1020.20214
rs3845444rs38454440.0290.43114
rs3845446rs38454460.1190.17514
CAMTA1rs1418490rs14184900.0540.03914
rs950493rs9504930.1390.26914
rs1396904rs13969040.170.36914
rs845263rs8452630.1290.43514
rs705695rs7056950.1350.43314
CAPN9rs1933633rs19336330.0210.21214
CASQ2rs950681rs9506810.0470.47514
rs950679rs9506790.0980.38414
CD244rs485618rs4856180.0730.41314
rs2280415rs22804150.120.4414
CD3Zrs952963rs9529630.0420.19514
rs953809rs9538090.0610.21314
CD53rs1343817rs13438170.1890.414
CD58rs1414275rs14142750.1690.39714
CDC42BPArs1877622rs18776220.1960.2114
CDC42BPA rs1343743rs13437430.1160.31514
CDC73rs1408830rs14088300.0980.42614
CFHrs2019727rs20197270.0840.28114
CHD1Lrs953087rs9530870.0470.43714
CHRM3SNP16-CHRM30.0320.0235
SNP17-CHRM30.0230.0535
SNP15-CHRM30.0080.0045
C___7539584_10rs8917000.0530.47250
SNP18-CHRM3rs40722340.0650.4615
CNIH3rs924362rs9243620.0930.44314
rs1369847rs13698470.1850.36814
rs722849rs7228490.1220.22114
COL11A1rs1415359rs14153590.1040.37414
COL24A1rs2014733rs20147330.0690.14914
CR1intron 27 HindIII rs111181330.080.35413
CR2rs1567190rs15671900.2750.36314
CRB1rs927510rs9275100.2730.35414
rs3888104rs38881040.1520.09314
CSMD2rs502585rs5025850.0960.39814
rs498925rs4989250.0850.37314
rs1382601rs13826010.160.30914
rs1382600rs13826000.1930.40214
rs1382599rs13825990.2190.3914
rs2641957rs26419570.1660.41714
rs1108929rs11089290.1280.12914
rs1065965rs10659650.2090.39514
rs1036756rs10367560.1880.38314
rs1441523rs14415230.2180.114
rs2358509rs23585090.0770.46114
CTSSSNP11-CATSrs108883900.0090.4425
SNP10-CATS0.0160.0085
A521Grs168276710.0150.4475
SNP8-CATSrs11367740.1910.2955
DAB1rs728719rs7287190.0950.16214
rs1202790rs12027900.2050.39514
rs1416347rs14163470.2340.26214
rs269048rs2690480.1830.34114
rs537732rs5377320.1520.39614
rs504971rs5049710.0960.15714
DISC1rs953244rs9532440.10.4514
rs967433rs9674330.0340.48214
DISP1rs728006rs7280060.0730.35814
DKFZp434B1231rs1404403rs14044030.0640.21914
DNAJC6rs724685rs7246850.1310.37314
DNM3rs593688rs5936880.110.2414
rs2227198rs22271980.2580.36314
rs2213731rs22137310.2040.3114
rs2206543rs22065430.130.42214
rs2209096rs22090960.0970.18714
DPYDrs952501rs9525010.20.2714
DTLrs1578992rs15789920.0830.4514
rs2014029rs20140290.2120.18314
EDARADDrs966364rs9663640.190.28514
EDG1rs3737576rs37375760.4830.14645
EFCAB2rs2050632rs20506320.2090.36214
ELTD1rs1489400rs14894000.2470.33514
ENAHrs576861rs5768610.1220.4214
EPB41rs957634rs9576340.140.18914
EPHA8rs482156rs4821560.2690.29814
rs667566rs6675660.2960.30214
EPHX1Tyr113Hisrs10517400.0330.4315
His139Argrs22349220.0270.3145
ERO1LBrs1749569rs17495690.2270.33214
rs1405634rs14056340.2370.32714
rs1405633rs14056330.2170.36714
ESRRGrs951034rs9510340.1050.44814
rs1416526rs14165260.050.28614
rs1416527rs14165270.0910.42114
rs1416615rs14166150.2350.26714
EVI5rs722356rs7223560.3030.34114
EXTL1 rs1343829rs13438290.0660.10213
F13BFXIIIB Alu insertion0.3210.326125
F3rs696619rs6966190.1680.39414
F5rs724509rs7245090.0910.43214
Arg506Glnrs60250.0080.033
FAF1rs1849553rs18495530.1070.2314
rs718257rs7182570.1090.23914
FAM46Crs826415rs8264150.0480.29914
FAM5Brs725416rs7254160.4130.24414
FAM5Crs1935881rs19358810.1250.29714
rs1935880rs19358800.2770.36214
rs718608rs7186080.1350.38214
rs718609rs7186090.0760.21214
rs725106rs7251060.1460.39314
FCRL4rs1885560rs18855600.070.314
FHAD1rs763821rs7638210.2160.38814
FLGrs2065956rs20659560.0960.28914
FLJ32784rs230175rs2301750.1950.40114
rs1076624rs10766240.2360.25714
FLVCRrs1587175rs15871750.1240.38514
FMN2rs720163rs7201630.1520.31614
rs988832rs9888320.1920.39914
rs1418048rs14180480.0990.39914
rs1418049rs14180490.0690.38814
FMO5rs1932977rs19329770.0540.38714
FRAP1rs718206rs7182060.3040.30914
FRRS1rs951125rs9511250.1720.38214
FYFY0.0050.3974
rs2814778rs28147780.8410.03549
GALNT2rs1124110rs11241100.0910.29914
rs627108rs6271080.0730.46314
rs1321257rs13212570.1390.42914
rs966333rs9663330.0870.10814
GBP6rs972314rs9723140.0960.23614
GJB5rs2093185rs20931850.2150.38814
GLT25D2rs1327136rs13271360.1260.37214
rs1409803rs14098030.2850.32714
rs724427rs7244270.080.09414
rs724426rs7244260.130.36814
GRIK3rs514262rs5142620.1950.26614
HEATR1rs959175rs9591750.10.44214
HIVEP3rs1073926rs10739260.0950.22114
rs681511rs6815110.1050.31214
rs871344rs8713440.1130.42514
rs871343rs8713430.1580.39414
rs1408946rs14089460.1860.0914
rs2365571rs23655710.1410.40514
rs1073197rs10731970.1380.24914
rs1325502rs13255020.2590.33845
HMCN1rs726777rs7267770.5130.22814
rs1407434rs14074340.250.34845
HMCN1 rs721153rs7211530.0890.45414
HOOK1rs1408478rs14084780.370.23414
HSD3B1BglII rs62030.4170.25913
IGSF21rs647325rs6473250.2880.35645
rs1399437rs13994370.0860.06514
IGSF3rs667830rs6678300.1560.27814
IL19rs1798rs17980.1680.23914
IL28RArs1416834rs14168340.0620.46614
rs1416835rs14168350.0710.45914
INADLrs1412622rs14126220.0520.46614
IPO9rs950114rs9501140.1230.15214
KCNC4rs2077402rs20774020.1240.28714
KCND3rs692982rs6929820.0990.44514
KCNH1rs1934614rs19346140.2040.33314
rs1112269rs11122690.170.31314
rs1934613rs19346130.0650.21414
rs1934611rs19346110.120.10114
rs1340128rs13401280.0950.45114
rs1418973rs14189730.1270.39714
KCNK2rs2363556rs23635560.1310.34514
KCNN3rs951241rs9512410.1220.214
rs1395565rs13955650.090.26414
KCNQ4rs727334rs7273340.0760.04514
rs727145rs7271450.1120.34113
KIAA1026rs718995rs7189950.1030.42814
rs718996rs7189960.0460.47714
KIAA1324rs591209rs5912090.3370.29914
KIF1BC__30057969_10rs75532280.0760.42741
C_____95000_10rs170346430.0720.43140
KLHDC8AC___9114654_10rs75492930.0760.42640
LAPTM5rs1951782rs19517820.1190.41414
LEPRrs1343981rs13439810.2310.35714
rs1327118rs13271180.1110.44314
LMX1Ars1394439rs13944390.1890.33714
rs1394437rs13944370.2110.36514
rs1395548rs13955480.1590.41614
rs1394438rs13944380.2070.36614
rs1343548rs13435480.1230.43514
LOC127086rs1397960rs13979600.0620.28814
LOC127099rs1079820rs10798200.0870.45614
LOC127602rs672832rs6728320.0750.38914
LOC128153rs1930300rs19303000.2040.29614
LOC199899rs952998rs9529980.2850.35414
LOC388657rs953457rs9534570.1630.41914
LOC391051rs953796rs9537960.0770.11614
LOC400793rs1394320rs13943200.0540.31714
LOC401974rs950303rs9503030.2370.33814
rs950302rs9503020.0970.44814
LOC440595rs722156rs7221560.2130.3614
LOC441904rs719969rs7199690.0640.27214
LOC642849rs2184083rs21840830.0660.28314
rs1333124rs13331240.2410.37314
LOC643110rs924181rs9241810.0640.3847
LOC643143rs1908141rs19081410.1040.04614
LOC643723rs1524634rs15246340.120.0514
LOC644094rs1213857rs12138570.0860.22714
LOC644213rs2363071rs23630710.1340.26214
rs951693rs9516930.1610.37214
rs2362815rs23628150.1610.37414
LOC645494rs12130799rs121307990.4330.145
LOC646270rs1570699rs15706990.140.29414
LOC646298rs1418845rs14188450.10.44714
LOC646417rs2224101rs22241010.1470.27443
LOC646425rs440826rs4408260.170.38344
rs1391520rs13915200.2640.33643
rs1858536rs18585360.0830.32144
C___8908363_10rs6996830.1830.22241
C___3111498_10rs6996800.1430.25341
LOC646562rs1408425rs14084250.0720.32914
LOC646688rs533094rs5330940.1110.32814
LOC646917rs321241rs3212410.2020.36714
LOC647125rs957553rs9575530.1350.31114
LOC647140rs720630rs7206300.1410.21414
LOC653674rs2355230rs23552300.1220.31114
rs2165870rs21658700.1180.30714
rs1304352rs13043520.420.19314
LPHN2rs665458rs6654580.0630.23414
LPPR4rs723196rs7231960.1240.34714
LRRC38rs3845607rs38456070.1050.26914
LRRC52rs722260rs7222600.0760.36514
rs1409413rs14094130.1620.18114
rs722259rs7222590.2250.38314
rs407380rs4073800.0550.11114
LRRC7rs1417444rs14174440.0910.13714
rs1361493rs13614930.2840.35114
rs1513296rs15132960.1160.39814
rs1913273rs19132730.0830.45614
rs1938577rs19385770.1370.18414
rs661765rs6617650.1250.43514
LRRC8Crs2390795rs23907950.2050.39714
LY9C___1006721_1_rs5606810.0390.4340
MACF1rs950805rs9508050.270.36114
rs722357rs7223570.2050.39714
MAN1A2rs1289944rs12899440.1570.32714
rs953119rs9531190.2140.314
rs1934251rs19342510.1480.26514
MGC27382rs720579rs7205790.1050.3614
MGC35030rs540933rs5409330.1780.40514
rs612101rs6121010.1410.42614
rs1173843rs11738430.2090.37814
MIER1rs1570838rs15708380.2270.36114
MOSC1rs4131748rs41317480.1010.29414
rs1389742rs13897420.210.39114
MRPS21P1rs2375675rs23756750.130.34414
MSH4C___8367722_10rs11443420.140.29640
C___2860687_10rs57455440.2430.33140
C___2860704_10rs57454580.1030.25140
C___2860717_10rs57454290.2510.33540
C___2860732_10rs111617310.2210.35639
C___3286096_10rs12512750.1350.36141
C___8367760_10rs11443310.1440.28741
rs5745354rs57453540.1310.32943
rs1565717rs15657170.1240.25144
rs1251272rs12512720.1430.35543
MTHFRArg594Glurs2274976000
Glu429Alars18011310.0830.42812
C677Trs18011330.0240.43115
MTMR11rs1868992rs18689920.2950.35214
MTRA2756Grs180508700.1721
MYOM3C____234618_10rs43133430.0920.42940
E_rs6678938_10rs66789380.1010.42141
NAV1rs724221rs7242210.0680.46314
rs529581rs5295810.1450.34614
NEGR1rs1112456rs11124560.20.39714
rs1385912rs13859120.1620.41914
rs526710rs5267100.1740.24914
NEK7rs1927252rs19272520.0990.44114
NESrs951781rs9517810.2420.28114
NFIArs334722rs3347220.1950.31714
NME7rs1208373rs12083730.2790.25214
NMNAT2rs951420rs9514200.1330.31214
rs1330224rs13302240.1770.41114
rs953274rs9532740.1830.40814
NOS1APrs347311rs3473110.1310.26614
rs1858232rs18582320.1610.35614
rs1932933rs19329330.1710.38714
rs1415260rs14152600.1270.40414
rs1858233rs18582330.1260.43214
rs4098277rs40982770.0890.19714