ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the Yale Center for Medical Informatics.
00ALFRED detailed record information

Locus Information

NameALFRED UIDLocus SymbolChromosomeBand Position
Collagen, type XXIV, alpha 1LO004309QCOL24A111p22.3
Synonyms:
Sites List: 
See Sites List
External Resources: Entrez Gene Locus Information   
References: See References
Locus Description: collagen, type XXIV, alpha 1
Sites within this locus ordered by their chromosomal position in the 37.3 NCBI build:
Site Name
(Navigates to ALFRED
description)
dbSNP rs#
(Navigates to dbSNP
reference page)
Chr-PositionStatus# Populations
typed
rs1047893rs1047893   8619504775
rs17128149rs17128149   8619653175
rs12564080rs12564080   86196586114
rs7532758rs7532758   86207749114
rs2014733rs2014733   8620938114
rs6673975rs6673975   8621151675
rs17400787rs17400787   8622635275
rs10493775rs10493775   8623331776
rs392038rs392038   86233871116
rs313728rs313728   86245155114
rs12754358rs12754358   8624843175
rs313710rs313710   86251836114
rs3753785rs3753785   8625894975
rs313733rs313733   8625969975
rs17128331rs17128331   8626106775
rs673506rs673506   8626358378
rs366187rs366187   8626525975
rs17128354rs17128354   8626581275
rs412328rs412328   86266842114
rs12727784rs12727784   8626803276
rs12239978rs12239978   8627378675
rs313742rs313742   8627385375
rs313746rs313746   8627831576
rs313756rs313756   8628003975
rs186376rs186376   8628645975
rs6693669rs6693669   8628758075
rs7527665rs7527665   8629690775
rs6661124rs6661124   8629744275
rs11161686rs11161686   8630118079
rs1325260rs1325260   8630145075
rs313702rs313702   8630962275
rs6576793rs6576793   8631270276
rs2170331rs2170331   86315724114
rs12133414rs12133414   8632683275
rs12759687rs12759687   8632812075
rs2046159rs2046159   86330589116
rs313769rs313769   8633314175
rs10873731rs10873731   8633981175
rs1871764rs1871764   8634516675
rs7556366rs7556366   8635167675
rs4486475rs4486475   8637951475
rs12568614rs12568614   8638039678
rs12136742rs12136742   86380987114
rs12136958rs12136958   86381650116
rs4912450rs4912450   8638587675
rs11578202rs11578202   8639257776
rs12567327rs12567327   8640713575
rs11161711rs11161711   8641217775
rs12723176rs12723176   8641302275
rs605060rs605060   86416725114
rs1698733rs1698733   8641769975
rs6665006rs6665006   86424650114
rs560876rs560876   86425382116
rs608460rs608460   86438327114
rs593146rs593146   8643944375
rs10493782rs10493782   86451381114
rs11799965rs11799965   8645323775
rs4912453rs4912453   8645733479
rs11161714rs11161714   8646190975
rs11161717rs11161717   8646498175
rs17128651rs17128651   8646573678
rs9701002rs9701002   8646950675
rs538256rs538256   8647561375
rs10493788rs10493788   86482334114
rs10518362rs10518362   8648363276
rs11161721rs11161721   8648791475
rs516213rs516213   86487981114
rs641712rs641712   86488232116
rs1408668rs1408668   86491849114
rs17128758rs17128758   8649467575
rs12402809rs12402809   86505567114
rs12143304rs12143304   8650575575
rs17128768rs17128768   8650759275
rs12743345rs12743345   8650999651
rs597669rs597669   8651475079
rs551219rs551219   86519721114
rs10518360rs10518360   8652580475
rs583315rs583315   8652661875
rs689040rs689040   8652707078
rs6682503rs6682503   86527492114
rs4522024rs4522024   86528548114
rs17415692rs17415692   86533142114
rs12725994rs12725994   86547632114
rs4912461rs4912461   86547798116
rs12754154rs12754154   8654919975
rs12736520rs12736520   8654949875
rs11161732rs11161732   8655796779
rs10782564rs10782564   8655883475
rs1336054rs1336054   86562052114
rs12402009rs12402009   8656301775
rs1360903rs1360903   86572463114
rs4912463rs4912463   8657527975
rs7550559rs7550559   8657782976
rs12075854rs12075854   8657895175
rs11161741rs11161741   86579033114
rs2390014rs2390014   8658058575
rs1507292rs1507292   86582679114
rs11161743rs11161743   8658513075
rs2390012rs2390012   8658738376
rs2174767rs2174767   8659091575
rs1027819rs1027819   8659156775
rs11161747rs11161747   8659183776
rs6576802rs6576802   8659394775
rs1507263rs1507263   8659396875
rs12569126rs12569126   8659521575
rs7531153rs7531153   8660143575
rs12117437rs12117437   8660232275
rs7516054rs7516054   8660394276
rs4912465rs4912465   8660579775
rs7518215rs7518215   8660996975
rs12120396rs12120396   86610803114
rs1889851rs1889851   8661354075
rs1507277rs1507277   86615389114
rs11161755rs11161755   86616271116
rs12080986rs12080986   8662116075
rs12076366rs12076366   8662145375

References:
- Shriver MD, Mei R, Parra EJ, Sonpar V, Halder I, Tishkoff SA, Schurr TG, Zhadanov SI, Osipova LP, Brutsaert TD, Friedlaender J, Jorde LB, Watkins WS, Bamshad MJ, Gutierrez G, Loi H, Matsuzaki H, Kittles RA, Argyropoulos G, Fernandez JR, Akey JM, Jones KW. "Large-scale SNP analysis reveals clustered and continuous patterns of human genetic variation". Hum Genomics. 2:81-89. (2005)
Online citation.

Top


© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan