ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the Yale Center for Medical Informatics.
00ALFRED detailed record information

Locus Information

NameALFRED UIDLocus SymbolChromosomeBand Position
Calcium channel, voltage-dependent, alpha 1E subunitLO005498ACACNA1E11q25-q31
Synonyms:
Sites List: 
See Sites List
External Resources: Entrez Gene Locus Information   
References: See References
Locus Description: calcium channel, voltage-dependent, alpha 1E subunit
Sites within this locus ordered by their chromosomal position in the 37.3 NCBI build:
Site Name
(Navigates to ALFRED
description)
dbSNP rs#
(Navigates to dbSNP
reference page)
Chr-PositionStatus# Populations
typed
rs556321rs556321   18145350976
rs12060765rs12060765   18145976075
rs943795rs943795   181462926114
rs16857428rs16857428   18146694075
rs12070246rs12070246   18146768775
rs595752rs595752   18146808475
rs3856088rs3856088   18146848975
rs576006rs576006   181473020114
rs558994rs558994   181477525114
rs17494681rs17494681   181480183116
rs4126690rs4126690   18148454375
rs517209rs517209   181488212114
rs4126689rs4126689   181488270114
rs589082rs589082   18148916775
rs10910948rs10910948   18149376775
rs593863rs593863   18149473975
rs16857509rs16857509   18149477575
rs593080rs593080   18149485850
rs625226rs625226   181500324116
rs4146634rs4146634   181503903114
rs2225875rs2225875   181506539114
rs6681017rs6681017   181508326114
rs1933049rs1933049   181510739114
rs12024842rs12024842   181513867114
rs4652663rs4652663   18151610175
rs13375076rs13375076   18151618575
rs11580052rs11580052   18151760875
rs7524309rs7524309   18151763875
rs10797724rs10797724   18151812575
rs6676111rs6676111   18151935575
rs2332429rs2332429   18152575575
rs17495655rs17495655   18152635475
rs16857648rs16857648   18152636978
rs10910957rs10910957   18152847275
rs12755303rs12755303   18152855575
rs10910958rs10910958   18152919975
rs1574781rs1574781   18153447176
rs7534818rs7534818   18153817775
rs10797729rs10797729   18153974775
rs10797730rs10797730   18154115975
rs1999838rs1999838   181541353115
rs12135959rs12135959   18154512475
rs3856090rs3856090   18154878875
rs10494540rs10494540   181549547116
rs10494541rs10494541   181550465114
rs12138634rs12138634   18155078375
rs12239392rs12239392   18155307078
rs2877652rs2877652   181553797114
rs6684423rs6684423   18156036775
rs3856094rs3856094   18156178378
rs4652667rs4652667   18156219878
rs10797733rs10797733   181568770114
rs12121075rs12121075   18157272175
rs7523997rs7523997   18157555275
rs199960rs199960   181579231114
rs4271174rs4271174   18158235076
rs16857808rs16857808   18158694675
rs199937rs199937   18159446575
rs199939rs199939   181595979114
rs199943rs199943   18159840075
rs12071300rs12071300   18159908975
rs175338rs175338   181605165114
rs199955rs199955   18161204175
rs10910977rs10910977   18161275375
rs4083386rs4083386   181622824114
rs199979rs199979   18162476575
rs6680280rs6680280   181629618114
rs12139532rs12139532   181631248114
rs199916rs199916   18163595476
rs3820260rs3820260   181638511114
rs3766980rs3766980   181643711114
rs3753737rs3753737   181645227114
rs3845441rs3845441   18165575275
rs3766988rs3766988   181667283116
rs7513540rs7513540   18167268278
rs3845444rs3845444   181674891121
rs4306091rs4306091   181676716114
rs2253388rs2253388   181686749114
rs12139677rs12139677   181703276114
rs3845445rs3845445   18170620175
rs3767002rs3767002   18171394475
rs16858051rs16858051   18171418475
rs3753748rs3753748   18171514675
rs3767004rs3767004   18171704775
rs704332rs704332   181719679114
rs704329rs704329   181727273114
rs697260rs697260   18173022676
rs199922rs199922   181735033114
rs199923rs199923   18173504475
rs2280868rs2280868   181741811114
rs199933rs199933   181747349114
rs473200rs473200   181754803116
rs704326rs704326   181759657114
rs4282766rs4282766   18176074975
rs3845446rs3845446   181766437123
rs3753752rs3753752   181766530121
rs638132rs638132   181768985114
rs590412rs590412   181771834114
rs12045458rs12045458   18177199275

References:
- Shriver MD, Mei R, Parra EJ, Sonpar V, Halder I, Tishkoff SA, Schurr TG, Zhadanov SI, Osipova LP, Brutsaert TD, Friedlaender J, Jorde LB, Watkins WS, Bamshad MJ, Gutierrez G, Loi H, Matsuzaki H, Kittles RA, Argyropoulos G, Fernandez JR, Akey JM, Jones KW. "Large-scale SNP analysis reveals clustered and continuous patterns of human genetic variation". Hum Genomics. 2:81-89. (2005)
Online citation.

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© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan