ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the Yale Center for Medical Informatics.
00ALFRED detailed record information

Locus Information

NameALFRED UIDLocus SymbolChromosomeBand Position
Collagen, type XI, alpha 1LO008103MCOL11A111p21
Synonyms:
Sites List: 
See Sites List
External Resources: Entrez Gene Locus Information   
References: See References
Locus Description: collagen, type XI, alpha 1
Sites within this locus ordered by their chromosomal position in the 37.3 NCBI build:
Site Name
(Navigates to ALFRED
description)
dbSNP rs#
(Navigates to dbSNP
reference page)
Chr-PositionStatus# Populations
typed
rs9659030rs9659030   10334239276
rs12086094rs12086094   10334734875
rs1241182rs1241182   10334810075
rs2077570rs2077570   10335090375
rs2229783rs2229783   103352451116
rs1676486rs1676486   10335413876
rs1241163rs1241163   10335576575
rs1085rs1085   10335616876
rs1463039rs1463039   103361698114
rs12142096rs12142096   10336290975
rs8179334rs8179334   10336709576
rs12141988rs12141988   10337154475
rs12145872rs12145872   10337165279
rs1763351rs1763351   10337343875
rs1676509rs1676509   103375336114
rs3753841rs3753841   103379918114
rs12121498rs12121498   10338012875
rs1241169rs1241169   10338461075
rs1763360rs1763360   10339072575
rs12138977rs12138977   103393457116
rs2045819rs2045819   103400314114
rs1120519rs1120519   103402184116
rs1975919rs1975919   103403752114
rs1564141rs1564141   10340423675
rs2126643rs2126643   10340438475
rs2126642rs2126642   10340579375
rs11164643rs11164643   10340689275
rs2622866rs2622866   10340716875
rs2622865rs2622865   10340799975
rs12046389rs12046389   103409100116
rs2616009rs2616009   10340955875
rs12084902rs12084902   10341012475
rs6691075rs6691075   10341669075
rs2615987rs2615987   10342941175
rs11164647rs11164647   10343268775
rs12118365rs12118365   10343879575
rs2622878rs2622878   10343981975
rs2061705rs2061705   10344181475
rs1903787rs1903787   10344449775
rs17507296rs17507296   10344940150
rs1463035rs1463035   103450196114
rs7544130rs7544130   103451455114
rs2615977rs2615977   103452392114
rs1463034rs1463034   103455217114
rs11809524rs11809524   10345953775
rs2622874rs2622874   10346691775
rs12131957rs12131957   10346722375
rs2929161rs2929161   10347512275
rs2622839rs2622839   10347617975
rs2050601rs2050601   10349802975
rs11164658rs11164658   10349989678
rs3850459rs3850459   10351742875
rs12136338rs12136338   10353900775
rs11164663rs11164663   103548497116
rs4908290rs4908290   10355149875
rs11164665rs11164665   10355191875
rs1415363rs1415363   103552935116
rs1337195rs1337195   10355429375
rs7544816rs7544816   10355605975
rs1572521rs1572521   10356286875
rs1415359rs1415359   10356444114
rs11164670rs11164670   10356454075
rs10493988rs10493988   103566156114
rs2376280rs2376280   103568464114
rs10493986rs10493986   10357012776
rs10493985rs10493985   10357043275
rs4338381rs4338381   10357292778
rs7537288rs7537288   103576354114
rs17127492rs17127492   10357636475
rs7543626rs7543626   103578334116

References:
- Shriver MD, Mei R, Parra EJ, Sonpar V, Halder I, Tishkoff SA, Schurr TG, Zhadanov SI, Osipova LP, Brutsaert TD, Friedlaender J, Jorde LB, Watkins WS, Bamshad MJ, Gutierrez G, Loi H, Matsuzaki H, Kittles RA, Argyropoulos G, Fernandez JR, Akey JM, Jones KW. "Large-scale SNP analysis reveals clustered and continuous patterns of human genetic variation". Hum Genomics. 2:81-89. (2005)
Online citation.

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© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan