Sample Name: Pushtoon

Sample UID: SA000535N

Sample Description:This sample consists of Pushtuns from Peshwar, which is located in northwest Pakistan.

Number of Chromosomes: 100

Relation to Other Samples:

References:
- Melton T, Peterson R, Redd AJ, Saha N, Sofro ASM, Martinson J, Stoneking M. "Polynesian genetic affinities with southeast Asian populations as identified by mtDNA analysis". Am J Hum Genet 57:403-414. (1995) Online citation.

Sample Name: Pathan

Sample UID: SA000830L

Sample Description:This sample consists of native Pathan individuals collected mainly from the North West Frontier Province of Pakistan and from Afghan refugees in Peshawar, Pakistan. The Biomedical & Genetic Engineering Laboratories in Islamabad, Pakistan is the source of the sample.

Number of Chromosomes: 226

Relation to Other Samples:

References:
- Mansoor A, Mazhar K, Khaliq S, Hameed A, Rehman S, Siddiqi S, Papaioannou M, Cavalli-Sforza LL, Mehdi SQ, Ayub Q. "Investigation of the Greek ancestry of populations from northern Pakistan". Hum Genet 114:484-90. (2004) Online citation.

Sample Name: Pathan

Sample UID: SA001911M

Sample Description:This sample consists of unrelated Pathans who speak an Indo-European language.

Number of Chromosomes: 234

Relation to Other Samples:

References:
- Khaliq S, Hameed A, Ayub Q, Mazhar K, Mohyuddin A, Mansoor A, Mehdi SQ "Frequency of CCR5 Gene 32-bp deletion in Pakistani ethnic groups". Genet Test. 6:123-7. (2002) Online citation.

Sample Name: Pathan, HGDP-CEPH

Sample UID: SA001480N

Sample Description:This sample is part of the Human Genome Diversity Cell Line Panel collected by the Human Genome Diversity Project (HGDP) and the Foundation Jean Dausset (CEPH). This sample consists of unrelated individuals and was collected with proper informed consent.

Number of Chromosomes: 50

Relation to Other Samples:

References:
- Rosenberg NA, Pritchard JK, Weber JL, Cann HM, Kidd KK, Zhivotovsky LA, Feldman MW. "Genetic structure of human populations". Science 298:2381-2385. (2002) Online citation.

Sample Name: Pathan

Sample UID: SA002873U

Sample Description:This sample consists unrelated individuals collected by Dr. Qasim Mehdi and colleagues in Pakistan. The Pathans inhabit the North West Frontier Province and Balochistan Province in Pakistan and parts of neighboring Afghanistan (Bellew 1998; Caroe 1958). They speak an Indo-European language, viz., Pushto (Grimes 1992). Legends claim that they are either the lost tribe of Israel or descendants of soldiers that came with Alexander the Great. This is not supported by current genetic data (Mansoor et al. 2004).

Number of Chromosomes: 184

Relation to Other Samples:

References:
- Kenneth K. Kidd et al. "Data unpublished".

Sample Name: Pathan, HGDP-CEPH

Sample UID: SA002262M

Sample Description:This sample is part of the Human Genome Diversity Cell Line Panel collected by the Human Genome Diversity Project (HGDP) and the Foundation Jean Dausset (CEPH). This sample consists of unrelated individuals and was collected with proper informed consent.

Note: In many publications subset H952 of the HGDP panel (with first and second degree relatives excluded from the original set)/ H971 subset with only the first degree relatives excluded was typed and for this population that does not change the sample size.

Number of Chromosomes: 48

Relation to Other Samples: Subset of SA001480N

References:
- Rosenberg NA. "Standardized subsets of the HGDP-CEPH Human Genome Diversity Cell Line Panel, accounting for atypical and duplicated samples and pairs of close relatives.". Ann Hum Genet. 70:841-847. (2006) Online citation.

Sample Name: Pathan

Sample UID: SA003078S

Sample Description:This sample consists of healthy adults belonging to Pathan tribe, a tribal group living in northern Pakistan. Informed consent were obtained from all individuals.

Number of Chromosomes: 100

Relation to Other Samples:

References:
- Mansoor A, Mazhar K, Ali L, Muazzam AG, Siddiqi S, Usman S. "Prevalence of the C677T single-nucleotide polymorphism in the methylenetetrahydrofolate reductase gene among Pakistani ethnic groups". Genet Test Mol Biomarkers. 13:521-6. (2009) Online citation.

Sample Name: Pathan

Sample UID: SA002428Q

Sample Description:This sample consists of Pathan muslims from Hyderabad, Andra Pradesh, India.

Number of Chromosomes: 100

Relation to Other Samples:

References:
- Ramana GV, Vasanthi A, Khaja M, Su B, Govindaiah V, Jin L, Singh L, Chakraborty R "Distribution of HIV-1 resistance-conferring polymorphic alleles SDF-1-3'A, CCR2-64I and CCR5-Delta32 in diverse populations of Andhra Pradesh, South India". J Genet. 80:137-40. (2001) Online citation.

Sample Name: Pathan

Sample UID: SA003591S

Sample Description:This sample consists of Pathans from pathan colony in Karachi. The study was approved by the Ethical review Committee of Aga Khan University, Pakisthan.

Number of Chromosomes: 372

Relation to Other Samples:

References:
- Khawaja MR, Taj F, Ahmad U, Saleheen D, Jafar T, Frossard PM. "Association of endothelial nitric oxide synthase gene G894T polymorphism with essential hypertension in an adult Pakistani Pathan population". Int J Cardiol. 116:113-5. (2007) Online citation.

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© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
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