ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the Yale Center for Medical Informatics.
00ALFRED detailed record information

Population Information

NameALFRED UIDPrimary LanguageLanguage Family
BuryatPO000393P

Synonyms:
Geographic Location1:  58N, 98E; 50N, 117E  

Sites typed for this population: View List
Population Samples: See Sample Information
External Resources: 
References: See references
Population Description: Being curated
References:


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Ulan Ude (Buryat)

Sample UID: SA000642M

Sample Description:This sample was collected from unrelated Buryats from the city of Ulan Ude. Ulan Ude is the capital of the Buryat Rupublic in north central Asia.

Number of Chromosomes: 92

Relation to Other Samples:

References:
- Antunez-de-Mayolo G, Antunez-de-Mayolo A, Antunez-de-Mayolo P, Papiha SS, Hammer M, Yunis JJ, Yunis EJ, Damodaran C, de Pancorbo MM, Caeiro JL, Puzyrev VP, Herrera RJ. "Phylogenetics of worldwide human populations as determined by polymorphic Alu insertions". Electrophoresis 23:3346-3356. (2002) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Ulan-Ude

Sample UID: SA000983U

Sample Description:This sample consists of unrelated Buryats from the city of Ulan-Ude in the Buryat Republic, Russia.

Number of Chromosomes: 120

Relation to Other Samples:

References:
- Khitrinskaya IYu, Stepanov V. A., Puzyrev V. P. "Analysis of the AluPolymorphism in the Buryat Populations.". Russian Journal of Genetics 37:1306-1311. (2001) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Khuramsha

Sample UID: SA000984V

Sample Description:This sample consists of unrelated Buryats from the settlement of Khurmasha. Khurmasha is west of the city of Ulan-Ude which is located in the Buryat Republic, Russia.

Number of Chromosomes: 120

Relation to Other Samples:

References:
- Khitrinskaya IYu, Stepanov V. A., Puzyrev V. P. "Analysis of the AluPolymorphism in the Buryat Populations.". Russian Journal of Genetics 37:1306-1311. (2001) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Kurumkan

Sample UID: SA000985W

Sample Description:This sample consists of unrelated Buryats from the city of Kurumkan. Kurumkan is located in the nothern region of the Buryat Republic, Russia.

Number of Chromosomes: 176

Relation to Other Samples:

References:
- Khitrinskaya IYu, Stepanov V. A., Puzyrev V. P. "Analysis of the AluPolymorphism in the Buryat Populations.". Russian Journal of Genetics 37:1306-1311. (2001) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Aginskoe

Sample UID: SA000986X

Sample Description:This sample consists of unrelated Buryats from the city of Aginskoe. Aginskoe is located in the Aginskii Buryat Autonomous okrug, Chita oblast (Russia).

Number of Chromosomes: 156

Relation to Other Samples:

References:
- Khitrinskaya IYu, Stepanov V. A., Puzyrev V. P. "Analysis of the AluPolymorphism in the Buryat Populations.". Russian Journal of Genetics 37:1306-1311. (2001) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Buryat

Sample UID: SA003735S

Sample Description:This sample consists of individuals from Buryat ethnic group from northeastern Mongolia. This sample was collected by the Sorenson Molecular Genealogy Foundation (SMGF). Informed consent was obtained from all the study subjects at the sampling location and the western Institutional Review Board approved all procedures.

Number of Chromosomes: 50

Relation to Other Samples:

References:
- Xing J, Watkins WS, Shlien A, Walker E, Huff CD, Witherspoon DJ, Zhang Y, Simonson TS, Weiss RB, Schiffman JD, Malkin D, Woodward SR, Jorde LB. "Toward a more uniform sampling of human genetic diversity: a survey of worldwide populations by high-density genotyping". Genomics 96:199-210. (2010) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Buryat

Sample UID: SA002866W

Sample Description:This sample consists of unrelated Buryat individuals, mainly living in Dashbalbar, Eastern Mongolia. The donors were selected at random, irrespective of skin color, and their phenotypic data were unavailable.

Number of Chromosomes: 286

Relation to Other Samples:

References:
- Yuasa I, Umetsu K, Harihara S, Kido A, Miyoshi A, Saitou N, Dashnyam B, Jin F, Lucotte G, Chattopadhyay PK, Henke L, Henke J. "Distribution of two Asian-related coding SNPs in the MC1R and OCA2 genes". Biochem Genet. 45:535-42. (2007) Online citation.

- Yuasa I, Umetsu K, Harihara S, Miyoshi A, Saitou N, Park KS, Dashnyam B, Jin F, Lucotte G, Chattopadhyay PK, Henke L, Henke J "OCA2 481Thr, a hypofunctional allele in pigmentation, is characteristic of northeastern Asian populations". J Hum Genet 52:690-3.. (2007) Online citation.

- Yuasa I, Umetsu K, Matsusue A, Nishimukai H, Harihara S, Fukumori Y, Saitou N, Jin F, Chattopadhyay PK, Henke L, Henke J. "A Japanese-specific allele in the GALNT11 gene". Leg Med (Tokyo). 12:208-11. (2010) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Buryats

Sample UID: SA002151J

Sample Description:This sample consists of unrelated Buryat individuals.

Number of Chromosomes: 60

Relation to Other Samples:

References:
- Voevoda MI, Avksentyuk AV, Ivanova AV, Astakhova TI. Babenko VN, Kurilovich SA, Duffy LK, Segal B, Shieds GF "Molecular Genetic Studies in an Indigenous Population of Chukotka: Analysis of the Polymorphism of mtDNA and Alcohol-Metabolizing Enzyme Genes". Sib. Ekol. Zh 2:149-162. (1994)


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Buryats

Sample UID: SA002790S

Sample Description:This sample consists of Buryats from the Okinski and Kizhinginsky districts of the Buryatia Republic. DNA samples were obtained from the DNA bank of the Research Institute of Medical Genetics in Tomsk, Russia. Blood samples were collected from volunteers for 15 years. The study was approved by the Institutional Review Board of the Research Institute of Medical Genetics (Tomsk, Russia). Written informed consent was obtained from the volunteers before blood sampling.

Number of Chromosomes: 176

Relation to Other Samples:

References:
- Makeeva O, Stepanov V, Puzyrev V, Goldstein DB, Grossman I "Global pharmacogenetics: genetic substructure of Eurasian populations and its effect on variants of drug-metabolizing enzymes". Pharmacogenomics. 9:847-68.. (2008) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Buryats(Aginskoe)

Sample UID: SA002809T

Sample Description:This sample consists of Buryats from the city of Aginskoe. Aginskoe is located in the Aginskii Buryat Autonomous okrug, Chita oblast (Russia).

Number of Chromosomes: 130

Relation to Other Samples:

References:
- Borinskaya S, Kal'ina N, Marusin A, Faskhutdinova G, Morozova I, Kutuev I, Koshechkin V, Khusnutdinova E, Stepanov V, Puzyrev V, Yankovsky N, Rogaev E. "Distribution of the alcohol dehydrogenase ADH1B*47His allele in Eurasia". Am J Hum Genet. 84:89-92. (2009) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Buryats (Kurumkan)

Sample UID: SA002810L

Sample Description:This sample consists of Buryats from Kurumkan, Russia.

Number of Chromosomes: 122

Relation to Other Samples:

References:
- Borinskaya S, Kal'ina N, Marusin A, Faskhutdinova G, Morozova I, Kutuev I, Koshechkin V, Khusnutdinova E, Stepanov V, Puzyrev V, Yankovsky N, Rogaev E. "Distribution of the alcohol dehydrogenase ADH1B*47His allele in Eurasia". Am J Hum Genet. 84:89-92. (2009) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Buryats(Ulan Ude)

Sample UID: SA002811M

Sample Description:This sample consists of Buryats from city of Ulan Ude. Ulan Ude is the capital of the Buryat Rupublic in north central Asia.

Number of Chromosomes: 236

Relation to Other Samples:

References:
- Borinskaya S, Kal'ina N, Marusin A, Faskhutdinova G, Morozova I, Kutuev I, Koshechkin V, Khusnutdinova E, Stepanov V, Puzyrev V, Yankovsky N, Rogaev E. "Distribution of the alcohol dehydrogenase ADH1B*47His allele in Eurasia". Am J Hum Genet. 84:89-92. (2009) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Buryats

Sample UID: SA003226N

Sample Description:This sample consists of Buryats from Ulan-Ude raion of the Republic of Buryatia.

Note: This sample information is not fully curated. For additional information about the sample, consult the publications under "References". The sample was entered as part of data submission by Eisenberg DA.

Number of Chromosomes: 104

Relation to Other Samples:

References:
- Borinskaia SA, Kal'ina NR, Sanina ED, Kozhekbaeva ZhM, Gupalo EIu, Garmash IV, Ogurtsov PP, Parshukova ON, Boĭko SG, Veselovskiĭ EM, Vershubskaia GG, Kozlov AI, Rogaev EI, Iankovskiĭ NK "Polymorphism of the apolipoprotein E gene (APOE) in the populations of Russia and neighboring countries". Genetika. 43:1434-40. (2007) Online citation.

- Eisenberg DA, Kuzawa, CW, Hayes MG "Worldwide allele frequencies of the human apolipoprotein E (APOE) gene: climate, local adaptations and evolutionary history". American Journal of Physical Anthropology 143:100-11. (2010) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Buryat

Sample UID: SA002316M

Sample Description:This sample consists of Buryat individuals. Informed consent was obtained.

Number of Chromosomes: 10

Relation to Other Samples:

References:
- Su B, Jin L, Hu F, Xiao J, Luo J, Lu D, Zhang W, Chu J, Du R, Geng Z, Qiu X, Xue J, Tan J, O'Brien SJ, Chakraborty R "Distribution of two HIV-1-resistant polymorphisms (SDF1-3'A and CCR2-64I) in East Asian and world populations and its implication in AIDS epidemiology". Am J Hum Genet. 65:1047-53. (1999) Online citation.

- Su B, Sun G, Lu D, Xiao J, Hu F, Chakraborty R, Deka R, Jin L "Distribution of three HIV-1 resistance-conferring polymorphisms (SDF1-3'A, CCR2-641, and CCR5-delta32) in global populations". Eur J Hum Genet. 8:975-9. (2000) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Buryats

Sample UID: SA003357S

Sample Description:This sample consists of Buryats.

Note: This sample information is not fully curated. For additional information about the sample, consult the publications under "References". The sample was entered as part of data submission by Eisenberg DA.

Number of Chromosomes: 250

Relation to Other Samples:

References:
- Eisenberg DA, Kuzawa, CW, Hayes MG "Worldwide allele frequencies of the human apolipoprotein E (APOE) gene: climate, local adaptations and evolutionary history". American Journal of Physical Anthropology 143:100-11. (2010) Online citation.

- Tsunoda K, Harihara S, Dashnyam B, Semjidmaa D, Yamaguchi Y, Tanabe Y, Sakai N, Sato A, Sato K. "Apolipoprotein E and H polymorphisms in Mongolian Buryat: allele frequencies and relationship with plasma lipid levels". Hum Biol. 74:659-71.. (2002) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Buryats

Sample UID: SA004286U

Sample Description:This sample consists of Buryats.

Number of Chromosomes: 80

Relation to Other Samples:

References:
- Rogalla U, Rychlicka E, Derenko MV, Malyarchuk BA, Grzybowski T. "Simple and cost-effective 14-loci SNP assay designed for differentiation of European, East Asian and African samples". Forensic Sci Int Genet. 14:42-9.. (2015) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Buryat

Sample UID: SA004587Y

Sample Description:This sample consists of Buryat individuals from the Siberia. To limit influence of admixture this sample included villagers who reportedly were settled in the sample place for at least three generations (up to grandparents) .This sample is part of the "core" data set that were genotyped for this study.

Number of Chromosomes: 88

Relation to Other Samples:

References:
- Triska P, Chekanov N, Stepanov V, Khusnutdinova EK, Kumar GPA, Akhmetova V, Babalyan K, Boulygina E, Kharkov V, Gubina M, Khidiyatova , Khitrinskaya , Khrameeva EE, Khusainova R, Konovalova N, Litvinov S, Marusin A, Mazur AM, Puzyrev V, Ivanoshchuk D, Spiridonova M, Teslyuk A, Tsygankova S, Triska M, Trofimova N, Vajda E, Balanovsky O, Baranova A, Skryabin K, Tatarinova TV, Prokhortchouk E "Between Lake Baikal and the Baltic Sea: genomic history of the gateway to Europe". BMC Genet 18:(2017) Online citation.


1Geographic Coordinates represent two opposite corners of a rectangle encompassing the area where the population lives.This data is preliminary and changing.

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© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan