ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the Yale Center for Medical Informatics.
00ALFRED detailed record information

Population Information

NameALFRED UIDPrimary LanguageLanguage Family
AndalusianPO000404I

Synonyms:
Geographic Location1:  38.75N, 7.5W; 36N, 1.5W  

Sites typed for this population: View List
Population Samples: See Sample Information
External Resources: 
References: See references
Population Description: Being curated
References:


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Andalusians

Sample UID: SA000947U

Sample Description:This sample consists of individuals from La Alpujarra (a region in the Mediterranean side of the Sierra Navada mountains, Southeast Spain). All individuals had the four grandfathers born in the same region. Informed consent was obtained from all participants.

Number of Chromosomes: 198

Relation to Other Samples:

References:
- Esteban E, Gonzalez-Perez E, Harich N, Lopez-Alomar A, Via M, Luna F, Moral P. "Genetic relationships among Berbers and South Spaniards based on CD4 microsatellite/Alu haplotypes. ". Ann Hum Biol. 31:202-12. (2004) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Andalusia

Sample UID: SA001016I

Sample Description:This sample consists of individuals from Andalusia (Southern Spain). Samples were taken from the National Institute of Toxicology of Seville (Spain).

Number of Chromosomes: 254

Relation to Other Samples:

References:
- Farfan MJ, Sanz P, Lareu MV, Carracedo A. "Population data on the D1S1656 and D12S391 STR loci in Andalusia (south Spain) and the maghreb (north Africa)". Forensic Sci Int 104:33-36. (1999) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Andulasia

Sample UID: SA001050G

Sample Description:This sample consists of randomly selected unerlated individuals from casework, paternity testing and staff living in Andulasia(southern spain).

Number of Chromosomes: 400

Relation to Other Samples:

References:
- Sanz P, Prieto V, Flores I, Torres Y, Lopez-Soto M, Farfan MJ "Population data of 13 STRS in southern Spain (Andalusia)". Forensic Sci Int 119:113-5. (2001) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Andalusia

Sample UID: SA001051H

Sample Description:This sample consists of unrelated, randomly selected individuals from casework, paternity testing, and staff living in Andulusia (Southern Spain).

Number of Chromosomes: 344

Relation to Other Samples:

References:
- Flores I, Frias I, Prieto V, Andres I, Sanz P. "Population data for Southern Spain and Canary Islands of HLADQA1, PM and D1S80 loci". Forensic Sci Int. 119:116-118. (2001) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Andalucia

Sample UID: SA001128M

Sample Description:This sample consists of unrelated Spanish Caucasians from Andalucia (Southern Spain).

Number of Chromosomes: 392

Relation to Other Samples:

References:
- Entrala C, Lorente M, Lorente JA, Alvarez JC, Moretti T, Budowle B, Villanueva E. "Fluorescent multiplex analysis of nine STR loci: Spanish population data". Forensic Sci Int. 98:179-183. (1998) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Andalusian

Sample UID: SA001801K

Sample Description:This sample consists of unrelated individual donors from Andalusia, Spain.

Number of Chromosomes: 108

Relation to Other Samples:

References:
- Perez-Miranda AM, Herrera RJ. "Genetic data on 13 STR loci in the Andalusian (South Spain) population". Leg Med (Tokyo). 7:201-203. (2005) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Andalusians

Sample UID: SA003435P

Sample Description:This sample consists of unrelated Andulasians from southern Spain. All individuals had all four grandparents born in the same region. Informed consent was obtained from all the donors.

Number of Chromosomes: 120

Relation to Other Samples:

References:
- Garagnani P, Laayouni H, González-Neira A, Sikora M, Luiselli D, Bertranpetit J, Calafell F. "Isolated populations as treasure troves in genetic epidemiology: the case of the Basques". Eur J Hum Genet. 17:1490-4. (2009) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Andalusian

Sample UID: SA003106K

Sample Description:This sample consists of subjects from Andalusia.

Number of Chromosomes: 100

Relation to Other Samples:

References:
- Falchi A, Barsotelli M, Giovannoni L, Varesi L, Vona G "Prevalance of MTHFR gene polymorphisms among Meditarenean populations: a possible genetic selection from Malaria?". 554-556. (2006)


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Andulasia

Sample UID: SA003595W

Sample Description:This sample consists of individuals from Andulasia in the South.

Number of Chromosomes: 242

Relation to Other Samples:

References:
- Via M, Gonzalez-Perez E, Esteban E, Lopez-Alomar A, Vacca L, Vona G, Dugoujon JM, Harich N, Moral P. "Molecular variation in endothelial nitric oxide synthase gene (eNOS) in western Mediterranean populations". Coll Antropol. 27:117-24. (2003) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Alia

Sample UID: SA003616Q

Sample Description:This sample consists of Tunisians with Andalusian origin from the locality of Alia, Tunisia. This community correspond to the descendants of Moors of western North African origin who lived in Andalusia for 10 centuries (between 8th and 17th centuries) before being expelled to Tunisia after Granada's capitulation in 1492.

Number of Chromosomes: 62

Relation to Other Samples:

References:
- Khodjet-el-khil H,Fadhlaoui-Zid F,Cherni L,Phillips C,Fondevila M, Carracedo A, Ben Ammar-Elgaaied A "Genetic analysis of the SNPforID 34-plex ancestry informative SNP panel in Tunisian and Libyan populations ". Forensic Science International: Genetics (Epub,ahead of print) (2010) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Testour

Sample UID: SA003617R

Sample Description:This sample consists of Tunisians with Andalusian origin from the locality of Testour, Tunisia. This community correspond to the descendants of Moors of western North African origin who lived in Andalusia for 10 centuries (between 8th and 17th centuries) before being expelled to Tunisia after Granada's capitulation in 1492.

Number of Chromosomes: 64

Relation to Other Samples:

References:
- Khodjet-el-khil H,Fadhlaoui-Zid F,Cherni L,Phillips C,Fondevila M, Carracedo A, Ben Ammar-Elgaaied A "Genetic analysis of the SNPforID 34-plex ancestry informative SNP panel in Tunisian and Libyan populations ". Forensic Science International: Genetics (Epub,ahead of print) (2010) Online citation.


1Geographic Coordinates represent two opposite corners of a rectangle encompassing the area where the population lives.This data is preliminary and changing.

Top


© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan