ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the Yale Center for Medical Informatics.
00ALFRED detailed record information

Population Information

NameALFRED UIDPrimary LanguageLanguage Family
HungarianPO000453M

Synonyms:
Geographic Location1:  48.5N, 16E; 45.5N, 23E  

Sites typed for this population: View List
Population Samples: See Sample Information
External Resources: 
References: See references
Population Description: Being curated
References:


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Gypsies, Hungarian

Sample UID: SA002565S

Sample Description:This sample consists of Gypsies living in North-East Hungary.

Number of Chromosomes: 266

Relation to Other Samples:

References:
- Nagy K, Kemeny B, Beres J, Horvath A "Molecular epidemiology of CCR5 HIV coreceptor gene polymorphism in gypsy subpopulation of Hungary". Int Conf AIDS Abstract no. WePeA5611 15:(2004)


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Caucasian

Sample UID: SA001346O

Sample Description:This sample consists of unrelated Hungarian Caucasian individuals living in Budapest area, Central Hungary.

Number of Chromosomes: 446

Relation to Other Samples:

References:
- Egyed B, Furedi S, Angyal M, Boutrand L, Vandenberghe A, Woller J, Padar Z. "Analysis of eight STR loci in two Hungarian populations". Int J Legal Med. 113:272-275. (2000) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarian

Sample UID: SA000836R

Sample Description:This sample consists of unrelated, healthy Hungarian Caucasian individuals residing in the Budapest area (Central Hungary).

Number of Chromosomes: 446

Relation to Other Samples:

References:
- Fżredi S, Woller J, Pżdżr Z. "A population study of the STR loci HUMLPL, HUMF13B, and HUMF13A01 in Hungary". Int J legal Med 110:107-108. (1997) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarian

Sample UID: SA000849V

Sample Description:This sample consists of unrelated individuals from southern Hungary.

Number of Chromosomes: 222

Relation to Other Samples:

References:
- Szabo A, Schurenkamp M, Huhne J. "Hungarian population data for six STR loci". Int J legal Med 111:49-51. (1998) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarian

Sample UID: SA000877W

Sample Description:This sample consists of unrelated Hungarian Caucasians living in Baranya County Hungary.

Number of Chromosomes: 254

Relation to Other Samples:

References:
- Kozma Z, Nagai A, Woller J, Furedi S, Setalo J, Ohya I, Nishi K. "Fluorescence based co-amplification and automated detection of the STR loci HUMFIBRA and HUMD21S11 in a Hungarian Caucasian population sample". Int J legal Med 111:103-104. (1998) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarian

Sample UID: SA001459T

Sample Description:This sample consists of unrelated individuals living in Central Hungary. Samples were collected irrespective of ethnic background from a blood bank in Budapest, Hungary.

Number of Chromosomes: 450

Relation to Other Samples:

References:
- Egyed B, Csikai M, Fredi S, Padar Z. "Population genetic data on the STR Loci D2S1338, D19S433 and SE33 in Hungary". J Forensic Sci. 50:720-21. (2005)


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarian

Sample UID: SA001638S

Sample Description:This sample consists of individuals from Hungary. (Coriell Institute)

Number of Chromosomes: 12

Relation to Other Samples:

References:
- Yoshiura KI et al. "A SNP in the ABCC11 gene is the determinant of human earwax type.". Nat Genet. 38:324-330. (2006) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarians

Sample UID: SA001869Y

Sample Description:This sample consists of unrelated indiviuals from Budapest, Hungary.

Number of Chromosomes: 198

Relation to Other Samples:

References:
- Libert F, Cochaux P, Beckman G, Samson M, Aksenova M, Cao A, Czeizel A, Claustres M, de la Rua C, Ferrari M, Ferrec C, Glover G, Grinde B, Guran S, Kucinskas V, Lavinha J, Mercier B, Ogur G, Peltonen L, Rosatelli C, Schwartz M, Spitsyn V, Timar L, Beckman L, Parmentier M, Vassart G "The deltaccr5 mutation conferring protection against HIV-1 in Caucasian populations has a single and recent origin in Northeastern Europe". Hum Mol Genet. 7:399-406.. (1998) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarian Caucasians

Sample UID: SA001792T

Sample Description:This sample consists of unrelated Hungarian Caucasian individuals living in the Budapest region (Central Hungary).

Number of Chromosomes: 446

Relation to Other Samples:

References:
- Egyed B, Furedi S, Angyal M, Balogh I, Kalmar L, Padar Z. "Analysis of the population heterogeneity in Hungary using fifteen forensically informative STR markers". Forensic Sci Int. 158:244-249. (2006) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarian

Sample UID: SA002099U

Sample Description:This sample consists of unrelated male and female Hungarians from Hungary.

Number of Chromosomes: 230

Relation to Other Samples:

References:
- Goedde HW, Agarwal DP, Fritze G, Meier-Tackmann D, Singh S, Beckmann G, Bhatia K, Chen LZ, Fang B, Lisker R "Distribution of ADH2 and ALDH2 genotypes in different populations". Hum Genet. 88:344-6. (1992) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarian

Sample UID: SA003439T

Sample Description:This sample consists of unrelated Hungarians (control group in a population based study) recruited in Budapest and Pécs (Hungary) and genotyped in the molecular genetic laboratory of Mária Sasvári-Székely (Department of Medical Chemistry, Molecular Biology and Pathobiochemistry, Semmelweis University, Budapest, Hungary)

Number of Chromosomes: 1196

Relation to Other Samples:

References:
- Szantai E, Kiraly O, Nemoda Z, Kereszturi E, Csapo Z, Sasvari-Szekely M, Gervai J, Ronai Z. "Linkage analysis and molecular haplotyping of the dopamine D4 receptor gene promoter region". Psychiatr Genet. 15:259-70. (2005) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarian

Sample UID: SA003440L

Sample Description:This sample consists of unrelated Hungarian subjects (with no psychiatric history) who were recruited at the Institute of Psychology, Eotvos Lorand University (Budapest, Hungary).

Number of Chromosomes: 356

Relation to Other Samples:

References:
- Nemoda Z, Lyons-Ruth K, Szekely A, Bertha E, Faludi G, Sasvari-Szekely M. "Association between dopaminergic polymorphisms and borderline personality traits among at-risk young adults and psychiatric inpatients". Behav Brain Funct 6:(2010) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarians

Sample UID: SA003841Q

Sample Description:This sample consists of present day Hungarians from different parts of Hungary.

Number of Chromosomes: 362

Relation to Other Samples:

References:
- Nagy D, Tömöry G, Csányi B, Bogácsi-Szabó E, Czibula Á, Priskin K, Bede O, Bartosiewicz L, Downes CS, Raskó I. "Comparison of lactase persistence polymorphism in ancient and present-day Hungarian populations". Am J Phys Anthropol. 145:262-9. (2011) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarians

Sample UID: SA003976Z

Sample Description:This sample is the subset of the Kidd Lab Hungarian sample. All are Hungarian Caucasian individuals residing in Budapest and its vicinity (Central Hungary). They speak the Hungarian language which is part of the Finno-Ugrian language family. This sample was collected at the Vadaskert Child Psychiatry Clinic located in Budapest (Hungary) and was collected by Dr Csaba Barta and Zsanett Tarnok.

Number of Chromosomes: 50

Relation to Other Samples: Subset of Sample SA002023H

References:
- Publication pending


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarian Gypsies

Sample UID: SA002567U

Sample Description:This sample consists of Gypsies from Hungary. The Gypsy ethnic group forms a relatively large, closed population in Hungary. Owing to their cultural and social traditions, they usually do not mix with Hungarians.

Number of Chromosomes: 208

Relation to Other Samples:

References:
- Szalai C, Császár A, Czinner A, Szabó T, Falus A "High frequency of the CCR5 deletion allele in Gypsies living in Hungary". Immunol Lett. 63:57-8. (1998) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungary

Sample UID: SA003326O

Sample Description:This sample consists of Hungarian individuals.

Note: This sample information is not fully curated. For additional information about the sample, consult the publications under "References". The sample was entered as part of data submission by Eisenberg DA.

Number of Chromosomes: 202

Relation to Other Samples:

References:
- Eisenberg DA, Kuzawa, CW, Hayes MG "Worldwide allele frequencies of the human apolipoprotein E (APOE) gene: climate, local adaptations and evolutionary history". American Journal of Physical Anthropology 143:100-11. (2010) Online citation.

- Szalai C, Czinner A, Császár A. "Influence of apolipoprotein E genotypes on serum lipid parameters in a biracial sample of children". Eur J Pediatr. 159:257-60.. (2000) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungary

Sample UID: SA002406M

Sample Description:This sample consists of individuals from Budapest, Hungary.

Number of Chromosomes: 188

Relation to Other Samples:

References:
- Magierowska M, Lepage V, Boubnova L, Carcassi C, de Juan D, Djoulah S, El Chenawi F, Grunnet N, Hallé L, Ivanova R, Jungerman M, Naumova E, Petrany G, Sonnerborg A, Stavropoulos C, Thorsby E, Vu-Trieu A, Debré P, Theodorou I, Charron D "Distribution of the CCR5 gene 32 base pair deletion and SDF1-3'A variant in healthy individuals from different populations". Immunogenetics. 48:417-9. (1998) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarians

Sample UID: SA002380N

Sample Description:This sample consists of healthy Hungarian individuals.

Number of Chromosomes: 506

Relation to Other Samples:

References:
- Szalai C, Császár A, Czinner A, Szabó T, Falus A "High frequency of the CCR5 deletion allele in Gypsies living in Hungary". Immunol Lett. 63:57-8. (1998) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarians

Sample UID: SA002023H

Sample Description:This sample consists of unrelated Hungarians. All are Hungarian Caucasian individuals residing in Budapest and its vicinity (Central Hungary). They speak the Hungarian language which is part of the Finno-Ugrian language family. This sample was collected at the Vadaskert Child Psychiatry Clinic located in Budapest (Hungary) and was collected by Dr Csaba Barta and Zsanett Tarnok.

Number of Chromosomes: 184

Relation to Other Samples:

References:
- Kenneth K. Kidd et al. "Data unpublished".


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Szeged

Sample UID: SA003323L

Sample Description:This sample consists of Hungarians.

Note: This sample information is not fully curated. For additional information about the sample, consult the publications under "References". The sample was entered as part of data submission by Eisenberg DA.

Number of Chromosomes: 158

Relation to Other Samples:

References:
- Eisenberg DA, Kuzawa, CW, Hayes MG "Worldwide allele frequencies of the human apolipoprotein E (APOE) gene: climate, local adaptations and evolutionary history". American Journal of Physical Anthropology 143:100-11. (2010) Online citation.

- Kálmán J, Juhász A, Császár A, Kanka A, Rimanóczy A, Janka Z, Raskó I. "Increased apolipoprotein E4 allele frequency is associated with vascular dementia in the Hungarian population". Acta Neurol Scand. 98:166-8.. (1998) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungary

Sample UID: SA002702L

Sample Description:This sample consists of specimens taken from consecutive newborns. Specimens were collected from the remainder of the blood spots from the two newborn screening centres that operate in Hungary. For twin pairs, only one of the pair selected at random was included. This study was conducted under the auspices of the International Clearinghouse for Birth Defect Monitoring Systems (ICBDMS) and was coordinated through its head office, the International Center on Birth Defects.

Number of Chromosomes: 754

Relation to Other Samples:

References:
- Wilcken B, Bamforth F, Li Z, Zhu H, Ritvanen A, Renlund M, Stoll C, Alembik Y, Dott B, Czeizel AE, Gelman-Kohan Z, Scarano G, Bianca S, Ettore G, Tenconi R, Bellato S, Scala I, Mutchinick OM, López MA, de Walle H, Hofstra R, Joutchenko L, Kavteladze L, Bermejo E, Martínez-Frías ML, Gallagher M, Erickson JD, Vollset SE, Mastroiacovo P, Andria G, Botto LD. "Geographical and ethnic variation of the 677C>T allele of 5,10 methylenetetrahydrofolate reductase (MTHFR): findings from over 7000 newborns from 16 areas world wide". J Med Genet. 40:619-25.. (2003) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarian

Sample UID: SA003329R

Sample Description:This sample consists of Hungarians individuals.

Note: This sample information is not fully curated. For additional information about the sample, consult the publications under "References". The sample was entered as part of data submission by Eisenberg DA.

Number of Chromosomes: 456

Relation to Other Samples:

References:
- Eisenberg DA, Kuzawa, CW, Hayes MG "Worldwide allele frequencies of the human apolipoprotein E (APOE) gene: climate, local adaptations and evolutionary history". American Journal of Physical Anthropology 143:100-11. (2010) Online citation.

- Nagy B, Bán Z, Tóth-Pál E, Papp C, Fintor L, Papp Z. "Apolipoprotein E allele distribution in trisomy 13, 18, and 21 conceptuses in a Hungarian population". Am J Clin Pathol. 113:535-8.. (2000) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarians

Sample UID: SA004061L

Sample Description:This sample consists of unrelated individuals from different regions of Hungary. Each person gave their informed consent prior to their inclusion in the study.

Number of Chromosomes: 392

Relation to Other Samples:

References:
- Kis Z et al. "Genome deletion and insertion polymorphisms(DIPs) in the Hungarian population". Forensic Sci Int Genet (Epub, article in press) (2011)


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarians

Sample UID: SA004375T

Sample Description:This sample is part of Kidd Lab sample collection and is a subset of sample SA002023H.

Number of Chromosomes: 82

Relation to Other Samples: Subset of SA002023H

References:
- Kenneth K. Kidd et al. "Data unpublished".


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Hungarian

Sample UID: SA004700L

Sample Description:This sample consists of Hungarian individuals in South Europe. Written informed consent was obtained from all individuals. This sample is part of Caixia Li's group in Institute of Forensic Science, Beijing, China. It was provided by the Kenneth K. Kidd's laboratory to Caixia lab.

Number of Chromosomes: 286

Relation to Other Samples:

References:
- Jiang L, Wei YL, Zhao L, Li N, Liu T, Liu HB, Ren LJ, Li JL, Hao HF, Li Q, Li CX. "Global analysis of population stratification using a smart panel of 27 continental ancestry-informative SNPs". Forensic Sci Int Genet. 35:e10-e12. (2018) Online citation.


1Geographic Coordinates represent two opposite corners of a rectangle encompassing the area where the population lives.This data is preliminary and changing.

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© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan