ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the Yale Center for Medical Informatics.
00ALFRED detailed record information

Population Information

NameALFRED UIDPrimary LanguageLanguage Family
BedouinPO000571N

Synonyms:
Geographic Location1:  32.25N, 34E; 29.25N, 36E  

Sites typed for this population: View List
Population Samples: See Sample Information
External Resources: 
References: See references
Population Description: Being curated
References:


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Bedouin, HGDP-CEPH

Sample UID: SA001472O

Sample Description:This sample from the Negev region of Israel is part of the Human Genome Diversity Cell Line Panel collected by the Human Genome Diversity Project (HGDP) and the Foundation Jean Dausset (CEPH). This sample consists of unrelated individuals and was collected with proper informed consent.

Number of Chromosomes: 98

Relation to Other Samples:

References:
- Rosenberg NA, Pritchard JK, Weber JL, Cann HM, Kidd KK, Zhivotovsky LA, Feldman MW. "Genetic structure of human populations". Science 298:2381-2385. (2002) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Bedouin (Saudi Arabia)

Sample UID: SA002045L

Sample Description:This sample consists of Bedouin individuals from Saudi Arabia. Individuals are unrelated at the grandpaternal level and ethnic origin was self-declared.

Number of Chromosomes: 92

Relation to Other Samples:

References:
- Ingram CJ, Elamin MF, Mulcare CA, Weale ME, Tarekegn A, Raga TO, Bekele E, Elamin FM, Thomas MG, Bradman N, Swallow DM. "A novel polymorphism associated with lactose tolerance in Africa: multiple causes for lactase persistence?". Hum Genet. 120:779-788. (2007) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Bedouin (Jordan)

Sample UID: SA002046M

Sample Description:This sample consists of Bedouin individuals from Jordan. Individuals are unrelated at the grandpaternal level and ethnic origin was self-declared.

Number of Chromosomes: 46

Relation to Other Samples:

References:
- Ingram CJ, Elamin MF, Mulcare CA, Weale ME, Tarekegn A, Raga TO, Bekele E, Elamin FM, Thomas MG, Bradman N, Swallow DM. "A novel polymorphism associated with lactose tolerance in Africa: multiple causes for lactase persistence?". Hum Genet. 120:779-788. (2007) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Bedouin, HGDP-CEPH

Sample UID: SA002254N

Sample Description:This sample from the Negev region of Israel is part of the Human Genome Diversity Cell Line Panel collected by the Human Genome Diversity Project (HGDP) and the Foundation Jean Dausset (CEPH). This sample consists of unrelated individuals and was collected with proper informed consent.

This sample is known as dataset "H1048" and is a subset of SA001472O.

Note: In many publications subset H952 of the HGDP panel (with first and second degree relatives excluded) was typed and for this population that decreases the sample size from 48 to 46 individuals and for subset H971(with only the first degree relatives excluded) the sample size decreases from 48 to 47 individuals.

Number of Chromosomes: 96

Relation to Other Samples: Subset of SA001472O

References:
- Rosenberg NA. "Standardized subsets of the HGDP-CEPH Human Genome Diversity Cell Line Panel, accounting for atypical and duplicated samples and pairs of close relatives.". Ann Hum Genet. 70:841-847. (2006) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Bedouins

Sample UID: SA002237O

Sample Description:This sample included voluntary blood donors and healthy relatives of Bedouin individuals living in Kuwait who were referred to the Kuwait Medical Genetics Center.

Number of Chromosomes: 216

Relation to Other Samples:

References:
- Voevodin A, Samilchuk E, Dashti S "A survey for 32 nucleotide deletion in the CCR-5 chemokine receptor gene (deltaccr-5) conferring resistance to human immunodeficiency virus type 1 in different ethnic groups and in chimpanzees". J Med Virol. 55:147-51. (1998) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Bedouin (Israel)

Sample UID: SA002043J

Sample Description:This sample consists of Bedouin individuals from Israel and the area of the Palestinian area. Individuals are unrelated at the grandpaternal level and ethnic origin was self-declared.

Number of Chromosomes: 38

Relation to Other Samples:

References:
- Ingram CJ, Elamin MF, Mulcare CA, Weale ME, Tarekegn A, Raga TO, Bekele E, Elamin FM, Thomas MG, Bradman N, Swallow DM. "A novel polymorphism associated with lactose tolerance in Africa: multiple causes for lactase persistence?". Hum Genet. 120:779-788. (2007) Online citation.


1Geographic Coordinates represent two opposite corners of a rectangle encompassing the area where the population lives.This data is preliminary and changing.

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© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan