Sample Name: Sindhi
Sample UID: SA001917S
Sample Description:This sample consists of unrelated Sindhi who speak an Indo-European language.
Number of Chromosomes: 198
Relation to Other Samples:
References:- Khaliq S, Hameed A, Ayub Q, Mazhar K, Mohyuddin A, Mansoor A, Mehdi SQ "Frequency of CCR5 Gene 32-bp deletion in Pakistani ethnic groups". Genet Test. 6:123-7. (2002) Online citation.
Sample Name: Sindhi, HGDP-CEPH
Sample UID: SA001479V
Sample Description:This sample from Pakistan is part of the Human Genome Diversity Cell Line Panel collected by the Human Genome Diversity Project (HGDP) and the Foundation Jean Dausset (CEPH). This sample consists of unrelated individuals and was collected with proper informed consent.
Note: In many publications subset H952 of the HGDP panel (with first and second degree relatives excluded from the original set) was typed and for this population that decreases the sample size from 25 to 24 individuals. In studies using H971 subset with only the first degree relatives excluded the sample size decreases from 25 to 24 individuals
Number of Chromosomes: 50
References:- Rosenberg NA, Pritchard JK, Weber JL, Cann HM, Kidd KK, Zhivotovsky LA, Feldman MW. "Genetic structure of human populations". Science 298:2381-2385. (2002) Online citation.
- Rosenberg NA. "Standardized subsets of the HGDP-CEPH Human Genome Diversity Cell Line Panel, accounting for atypical and duplicated samples and pairs of close relatives.". Ann Hum Genet. 70:841-847. (2006) Online citation.
Sample UID: SA003086R
Sample Description:This sample consists of healthy, adults belonging to Sindhi tribe, a tribal group living in Southern Pakistan. Informed consent were obtained from all individuals.
Number of Chromosomes: 102
References:- Mansoor A, Mazhar K, Ali L, Muazzam AG, Siddiqi S, Usman S. "Prevalence of the C677T single-nucleotide polymorphism in the methylenetetrahydrofolate reductase gene among Pakistani ethnic groups". Genet Test Mol Biomarkers. 13:521-6. (2009) Online citation.
Sample Name: Sindh
Sample UID: SA002524N
Sample Description:This sample consists of unrelated individuals from Sindh. This sample was collected as part of anthropological surveys of investigation of non-HIV related medical conditions.
Number of Chromosomes: 58
References:- Martinson JJ, Chapman NH, Rees DC, Liu YT, Clegg JB. "Global distribution of the CCR5 gene 32-basepair deletion". Nat Genet 16:100-103. (1997) Online citation.
© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.Originally prototyped by Michael Osier with the aid of Kei CheungUpgrades and maintenance since 2002 by Haseena Rajeevan