Sample Name: Xibo, HGDP-CEPH
Sample UID: SA001491P
Sample Description:This sample from China is part of the Human Genome Diversity Cell Line Panel collected by the Human Genome Diversity Project (HGDP) and the Foundation Jean Dausset (CEPH). This sample consists of unrelated individuals and was collected with proper informed consent.
Number of Chromosomes: 18
Relation to Other Samples:
References:- Rosenberg NA, Pritchard JK, Weber JL, Cann HM, Kidd KK, Zhivotovsky LA, Feldman MW. "Genetic structure of human populations". Science 298:2381-2385. (2002) Online citation.
Sample Name: Xibo
Sample UID: SA002017K
Sample Description:This sample consists of healthy unrelated Xibo individuals from northwest China. Each individual was the offspring of a non-consanguineous marriage of members of the same nationality within three generations.
Number of Chromosomes: 68
References:- Ma L, Xue Y, Liu Y, Wang Z, Cui X, Li P, Fu S. "Polymorphism study of seven SNPs at ADH genes in 15 Chinese populations". Hereditas. 142:103-111. (2005) Online citation.
Sample UID: SA002758W
Sample Description:This sample consists of Xibo individuals from Kaiyuan city, Liaoning Province, China.
Number of Chromosomes: 24
References:- Li H & Kidd KK "Low allele frequency of ADH1B*47His in West China and different ADH1B haplotypes in Western Asia from Eastern Asia". Am. J. Med. Genet. 84:92-94. (2009)
Sample UID: SA002636R
Sample Description:This sample consists of healthy, unrelated Xibo individuals from Yili of Xinjiang province, China. Each individual was the offspring of a non-consanguineous marriage of members of the same nationality within three generations. Informed consent from the participants and the approval of appropriate local authority were obtained.
Number of Chromosomes: 178
References:- Mao R, Fan Y, Chen F, Fu S. "Genetic polymorphism of MTHFR G1793A in Chinese populations". Eur J Epidemiol. (Epub ahead of print) (2008)
- Mao R, Fan Y, Chen F, Sun D, Bai J, Fu S. "Methylenetetrahydrofolate reductase gene polymorphisms in 13 Chinese ethnic populations.". Cell Biochem Funct. 26:352-8. (2008) Online citation.
Sample Name: Xibe
Sample UID: SA002884W
Sample Description:This sample consists of male Xibe individuals from China. The protocol of this study was approved by the institutional review board of Kunming Institute of Zoology, Chinese Academy of Sciences.
Number of Chromosomes: 62
References:- Shi H, Tan SJ, Zhong H, Hu W, Levine A, Xiao CJ, Peng Y, Qi XB, Shou WH, Ma RL, Li Y, Su B, Lu X "Winter temperature and UV are tightly linked to genetic changes in the p53 tumor suppressor pathway in Eastern Asia". Am J Hum Genet. 84:534-41.. (2009) Online citation.
Sample Name: Xibe in Xinjiang, China(CXX)
Sample UID: SA004408Q
Sample Description:This sample consists of Xibo individuals from Xinjiang Province, China.
Number of Chromosomes: 196
Relation to Other Samples: Superset of sample SA004323M
References:- Wei YL, Wei L, Zhao L, Sun QF, Jiang L, Zhang T, Liu HB, Chen JG, Ye J, Hu L, Li CX "A single-tube 27-plex SNP assay for estimating individual ancestry and admixture from three continents". Int J Legal Med. 130:27-37. (2016) Online citation.
Sample UID: SA004338S
Sample Description:This sample consists of unrelated healthy Xibe individuals living in Ili, Xinjiang Uygur autonomous region, China. Before sample collection, all the participants signed the informed consent after given an explanation about this study. Volunteers in this study should have ancestors living in the region for more than three generations and have no common ancestry tracing back more than three generations. The study was conducted in accordance with the human and ethical research principles of Xi'an Jiaotong University Health Science Center, China and approved by the ethics committee of Xi'an Jiaotong University Health Science Center.
Number of Chromosomes: 466
References:- Meng HT, Zhang YD, Shen CM, Yuan GL, Yang CH, Jin R, Yan JW, Wang HD, Liu WJ, Jing H, Zhu BF. "Genetic polymorphism analyses of 30 InDels in Chinese Xibe ethnic group and its population genetic differentiations with other group". Sci Rep. (2015) Online citation.
Sample UID: SA004323M
Number of Chromosomes: 58
References:- Pakstis AJ , Haigh E, Cherni L, Ben Ammar ElGaaied A, Barton A, Evsanaa B, Togtokh A, Brissenden J, Roscoe J, Bulbul O, Filoglu G, Gurkan C, Meiklejohn KA, Robertson JM, Li,C.-X. Wei Y.-L., Li H,Soundararajan U,Rajeevan H, Kidd JR, Kidd KK "52 additional reference population samples for the 55 AISNP panel". Forensic Science International: Genetics 269-271. (2015) Online citation.
Sample Name: Xibe in Xinjiang, China (CXX)
Sample UID: SA004661R
Sample Description:This sample consists of Xibe individuals from Xinjiang Province,China. Written informed consent was obtained from all individuals. This sample is part of Caixia Li's group in Institute of Forensic Science, Beijing, China.
Number of Chromosomes: 190
Relation to Other Samples: Subset of SA004408Q
References:- Jiang L, Wei YL, Zhao L, Li N, Liu T, Liu HB, Ren LJ, Li JL, Hao HF, Li Q, Li CX. "Global analysis of population stratification using a smart panel of 27 continental ancestry-informative SNPs". Forensic Sci Int Genet. 35:e10-e12. (2018) Online citation.
© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.Originally prototyped by Michael Osier with the aid of Kei CheungUpgrades and maintenance since 2002 by Haseena Rajeevan