ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the Yale Center for Medical Informatics.
00ALFRED detailed record information

Population Information

NameALFRED UIDPrimary LanguageLanguage Family
TuPO000584R

Synonyms:
Geographic Location1:  40N, 90E; 31.5N, 105E  

Sites typed for this population: View List
Population Samples: See Sample Information
External Resources: 
References: See references
Population Description: Being curated
References:


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Tu, HGDP-CEPH

Sample UID: SA001497V

Sample Description:This sample from China is part of the Human Genome Diversity Cell Line Panel collected by the Human Genome Diversity Project (HGDP) and the Foundation Jean Dausset (CEPH). This sample consists of unrelated individuals and was collected with proper informed consent.

Number of Chromosomes: 20

Relation to Other Samples:

References:
- Rosenberg NA, Pritchard JK, Weber JL, Cann HM, Kidd KK, Zhivotovsky LA, Feldman MW. "Genetic structure of human populations". Science 298:2381-2385. (2002) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Tu

Sample UID: SA002893W

Sample Description:This sample consists of male Tu individuals from China. The protocol of this study was approved by the institutional review board of Kunming Institute of Zoology, Chinese Academy of Sciences.

Number of Chromosomes: 100

Relation to Other Samples:

References:
- Shi H, Tan SJ, Zhong H, Hu W, Levine A, Xiao CJ, Peng Y, Qi XB, Shou WH, Ma RL, Li Y, Su B, Lu X "Winter temperature and UV are tightly linked to genetic changes in the p53 tumor suppressor pathway in Eastern Asia". Am J Hum Genet. 84:534-41.. (2009) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Chinese Tu in Baile Qinghai, China (TUB)

Sample UID: SA004672T

Sample Description:This sample consists of Chinese Tu in Baile Qinghai Province,China. Written informed consent was obtained from all individuals. This sample is part of Caixia Li's group in Institute of Forensic Science, Beijing, China.

Number of Chromosomes: 112

Relation to Other Samples:

References:
- Jiang L, Wei YL, Zhao L, Li N, Liu T, Liu HB, Ren LJ, Li JL, Hao HF, Li Q, Li CX. "Global analysis of population stratification using a smart panel of 27 continental ancestry-informative SNPs". Forensic Sci Int Genet. 35:e10-e12. (2018) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Chinese Tu in Wufeng Qinghai, China (TUW)

Sample UID: SA004673U

Sample Description:This sample consists of Chinese Tu in Wufeng Qinghai Province,China. Written informed consent was obtained from all individuals. This sample is part of Caixia Li's group in Institute of Forensic Science, Beijing, China.

Number of Chromosomes: 126

Relation to Other Samples:

References:
- Jiang L, Wei YL, Zhao L, Li N, Liu T, Liu HB, Ren LJ, Li JL, Hao HF, Li Q, Li CX. "Global analysis of population stratification using a smart panel of 27 continental ancestry-informative SNPs". Forensic Sci Int Genet. 35:e10-e12. (2018) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Tu

Sample UID: SA004319R

Sample Description:This sample consists of Tu individuals from Qinghai Province, China.

Number of Chromosomes: 52

Relation to Other Samples:

References:
- Pakstis AJ , Haigh E, Cherni L, Ben Ammar ElGaaied A, Barton A, Evsanaa B, Togtokh A, Brissenden J, Roscoe J, Bulbul O, Filoglu G, Gurkan C, Meiklejohn KA, Robertson JM, Li,C.-X. Wei Y.-L., Li H,Soundararajan U,Rajeevan H, Kidd JR, Kidd KK "52 additional reference population samples for the 55 AISNP panel". Forensic Science International: Genetics 269-271. (2015) Online citation.


1Geographic Coordinates represent two opposite corners of a rectangle encompassing the area where the population lives.This data is preliminary and changing.

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© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan