ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the Yale Center for Medical Informatics.
00ALFRED detailed record information

Population Information

NameALFRED UIDPrimary LanguageLanguage Family
AltaianPO000639S

Synonyms: Altay ;
Geographic Location1:  54N, 85E; 49N, 90E  

Sites typed for this population: View List
Population Samples: See Sample Information
External Resources: 
References: See references
Population Description: Being curated
References:


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Altaian

Sample UID: SA001683S

Sample Description:This sample consists of Altaian individuals collected in Siberia.

Number of Chromosomes: 40

Relation to Other Samples:

References:
- Shriver MD, Mei R, Parra EJ, Sonpar V, Halder I, Tishkoff SA, Schurr TG, Zhadanov SI, Osipova LP, Brutsaert TD, Friedlaender J, Jorde LB, Watkins WS, Bamshad MJ, Gutierrez G, Loi H, Matsuzaki H, Kittles RA, Argyropoulos G, Fernandez JR, Akey JM, Jones KW. "Large-scale SNP analysis reveals clustered and continuous patterns of human genetic variation". Hum Genomics. 2:81-89. (2005) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Altaians

Sample UID: SA003797A

Sample Description:This sample consists of Altaians from South Siberia/republic of Altai. Blood samples were collected during expeditions in 2000-2008. The ethnic origin was defined by direct interview.

Number of Chromosomes: 460

Relation to Other Samples:

References:
- Dzhemileva LU, Barashkov NA, Posukh OL, Khusainova RI, Akhmetova VL, Kutuev IA, Gilyazova IR, Tadinova VN, Fedorova SA, Khidiyatova IM, Lobov SL, Khusnutdinova EK. "Carrier frequency of GJB2 gene mutations c.35delG, c.235delC and c.167delT among the populations of Eurasia". J Hum Genet. 55:749-54. (2010) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Altaians

Sample UID: SA002791T

Sample Description:This sample consists of Southern Altaians residing in the village of Beshpeltir of the Altai republic. DNA samples were obtained from the DNA bank of the Research Institute of Medical Genetics in Tomsk, Russia. Blood samples were collected from volunteers for 15 years. The study was approved by the Institutional Review Board of the Research Institute of Medical Genetics (Tomsk, Russia). Written informed consent was obtained from the volunteers before blood sampling.

Number of Chromosomes: 174

Relation to Other Samples:

References:
- Makeeva O, Stepanov V, Puzyrev V, Goldstein DB, Grossman I "Global pharmacogenetics: genetic substructure of Eurasian populations and its effect on variants of drug-metabolizing enzymes". Pharmacogenomics. 9:847-68.. (2008) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Altaians

Sample UID: SA002152K

Sample Description:This sample consists of unrelated Altaian individuals.

Number of Chromosomes: 34

Relation to Other Samples:

References:
- Voevoda MI, Avksentyuk AV, Ivanova AV, Astakhova TI. Babenko VN, Kurilovich SA, Duffy LK, Segal B, Shieds GF "Molecular Genetic Studies in an Indigenous Population of Chukotka: Analysis of the Polymorphism of mtDNA and Alcohol-Metabolizing Enzyme Genes". Sib. Ekol. Zh 2:149-162. (1994)


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Altaians Southern

Sample UID: SA002813O

Sample Description:This sample consists of Southern Altaians from Russia.

Number of Chromosomes: 130

Relation to Other Samples:

References:
- Borinskaya S, Kal'ina N, Marusin A, Faskhutdinova G, Morozova I, Kutuev I, Koshechkin V, Khusnutdinova E, Stepanov V, Puzyrev V, Yankovsky N, Rogaev E. "Distribution of the alcohol dehydrogenase ADH1B*47His allele in Eurasia". Am J Hum Genet. 84:89-92. (2009) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Altaians Northern

Sample UID: SA002814P

Sample Description:This sample consists of Northern Altaians from Russia.

Number of Chromosomes: 192

Relation to Other Samples:

References:
- Borinskaya S, Kal'ina N, Marusin A, Faskhutdinova G, Morozova I, Kutuev I, Koshechkin V, Khusnutdinova E, Stepanov V, Puzyrev V, Yankovsky N, Rogaev E. "Distribution of the alcohol dehydrogenase ADH1B*47His allele in Eurasia". Am J Hum Genet. 84:89-92. (2009) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Altaians

Sample UID: SA004284S

Sample Description:This sample consists of Altaians from Altai-Kizhi.

Number of Chromosomes: 100

Relation to Other Samples:

References:
- Rogalla U, Rychlicka E, Derenko MV, Malyarchuk BA, Grzybowski T. "Simple and cost-effective 14-loci SNP assay designed for differentiation of European, East Asian and African samples". Forensic Sci Int Genet. 14:42-9.. (2015) Online citation.


1Geographic Coordinates represent two opposite corners of a rectangle encompassing the area where the population lives.This data is preliminary and changing.

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© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan