ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the Yale Center for Medical Informatics.
00ALFRED detailed record information

Population Information

NameALFRED UIDPrimary LanguageLanguage Family
LibyaPO000868W

Synonyms:
Geographic Location1:  32N, 23E; 24N, 13E  

Sites typed for this population: View List
Population Samples: See Sample Information
External Resources: 
References: See references
Population Description: 
References:


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Libyans

Sample UID: SA003394T

Sample Description:This sample consists of Libyans. This sample is part of the expanded training sets that were used to asses the 34-plex Ancestry informative marker set assay.

Number of Chromosomes: 62

Relation to Other Samples:

References:
- Phillips C, Prieto L, Fondevila M, Salas A, Gómez-Tato A, Alvarez-Dios J, Alonso A, Blanco-Verea A, Brión M, Montesino M, Carracedo A, Lareu MV. "Ancestry analysis in the 11-M Madrid bomb attack investigation". PLoS One. 4:e6583. (2009) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Libyans

Sample UID: SA003618S

Sample Description:This sample consists of Libyans.

Number of Chromosomes: 62

Relation to Other Samples:

References:
- Khodjet-el-khil H,Fadhlaoui-Zid F,Cherni L,Phillips C,Fondevila M, Carracedo A, Ben Ammar-Elgaaied A "Genetic analysis of the SNPforID 34-plex ancestry informative SNP panel in Tunisian and Libyan populations ". Forensic Science International: Genetics (Epub,ahead of print) (2010) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Lybia

Sample UID: SA004261N

Sample Description:This sample consists of Unrelated Lybians. This sample was collected by Dr.Lotfi Cherni.

Number of Chromosomes: 142

Relation to Other Samples:

References:
- Cherni L, Pakstis AJ, Boussetta S, Elkamel S, Frigi S, Khodjet-El-Khil H, Barton A, Haigh E, Speed WC, Elgaaied ABA, Kidd JR, Kidd KK. "Genetic Variation in Tunisia in the context of human diversity worldwide". Am J Phys Anthropol 1:62-71. (2016) Online citation.


Sample Information:

Graph estimated heterozygosities for various sites

Sample Name: Libyans

Sample UID: SA004235O

Sample Description:This sample consists of Libyans.

Number of Chromosomes: 100

Relation to Other Samples:

References:
- Engelken J1, Carnero-Montoro E2, Pybus M2, Andrews GK3, Lalueza-Fox C2, Comas D2, Sekler I4, de la Rasilla M5, Rosas A6, Stoneking M7, Valverde MA8, Vicente R8, Bosch E2 "Extreme population differences in the human zinc transporter ZIP4 (SLC39A4) are explained by positive selection in Sub-Saharan Africa". PLoS Genet 10:(2014) Online citation.


1Geographic Coordinates represent two opposite corners of a rectangle encompassing the area where the population lives.This data is preliminary and changing.

Top


© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan