ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the U. S. National Science Foundation.
00ALFRED detailed record information

Polymorphism Information

NameALFRED UIDLocus NameLocus Symbol
3-site haplotypeSI001087QTaste receptor, type 2, member 38 TAS2R38
Synonyms:
Frequency Display Formats:     
Estimated Heterozygosity: 
External Resources: 
References: See References
Polymorphism Description:  The sites in this 3-site haplotype ordered from left to right are
C___8876467_10(UID=SI000882S) This site is an alanine(A) to proline (P) substitution polymorphism at aminoacid position 49.
C___9506827_10(UID=SI001020D) This site is an alanine(A) to valine(V) substitution polymorphism at aminoacid position 262.
C___9506826_10(UID=SI000883T) This site is a valine(V) to isoleucine(I) substitution polymorphism at aminoacid position 296.
Alleles:
Allele NameAllele SymbolDescription
A-A-IA-A-I49Ala-262Ala-296Ile
A-A-VA-A-V49Ala-262Ala-296Val
A-V-IA-V-I49Ala-262Val-296Ile
P-A-VP-A-V49Pro-262Ala-296Val
P-V-IP-V-I49Pro-262Val-296Ile

References:
- Davidson AC, Pakstis AJ, Speed WC, Bartoshuk L, Duffy V, Friedlaender J, Grigorenko EL, Kajuna SLJ, Karoma NJ, Kim JJ, Kungulilo S, Lu RB, Odunsi A, Okonofua F, Parnas J, Schulz LO, Snyder DJ, Zhukova OV, Kidd KK, Kidd JR. "No Evidence for balancing Selection at the TAS2R38 (PTC) Gene". Submitted


© 2018 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan