ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the U. S. National Science Foundation.
00ALFRED detailed record information

Polymorphism Information

NameALFRED UIDLocus NameLocus Symbol
5-site haplotypeSI001218Mb-globin gene clusterHBB@
Synonyms:
Frequency Display Formats:     
Estimated Heterozygosity: 
External Resources: 
References: See References
Polymorphism Description:  The 5 sites ordered from 5' to 3' are
HincII site 5' to HBE1 (hemoglobin, epsilon 1) gene (UID=SI001219N)
HindIII site in HBG2 (hemoglobin, gamma G) gene (UID=SI001220F)
HindIII site in HBG1 (hemeglobin, gamma A) gene (UID=SI001221G)
HincII site in HBBP1 (hemoglobin, beta pseudogene 1) (UID=SI000810J)
HincII site 3' to HBBP1 (hemeglobin, beta pseudogene 1) (UID=SI000811K)

The alleles are described as '+' for site present and '-' for site absent.
Alleles:
Allele NameAllele SymbolDescription
+/+/+/-/++/+/+/-/+
+/+/+/-/-+/+/+/-/-
+/+/-/+/++/+/-/+/+
+/+/-/-/++/+/-/-/+
+/+/-/-/-+/+/-/-/-
+/-/+/-/-+/-/+/-/-
+/-/-/+/++/-/-/+/+
+/-/-/+/-+/-/-/+/-
+/-/-/-/++/-/-/-/+
+/-/-/-/-+/-/-/-/-
-/+/+/+/+-/+/+/+/+
-/+/+/-/+-/+/+/-/+
-/+/+/-/--/+/+/-/-
-/+/-/+/+-/+/-/+/+
-/+/-/+/--/+/-/+/-
-/+/-/-/+-/+/-/-/+
-/+/-/-/--/+/-/-/-
-/-/+/-/--/-/+/-/-
-/-/-/+/+-/-/-/+/+
-/-/-/-/+-/-/-/-/+
-/-/-/-/--/-/-/-/-

References:
- Mattevi VS, Fiegenbaum M, Salzano FM, Weiss KM, Moore J, Monsalve MV, Devine DV, Hutz MH. "Beta-globin gene cluster haplotypes in two North American indigenous populations". Am J Phys Anthropol. 112:311-317. (2000)
Online citation.


© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan