ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the Yale Center for Medical Informatics.
00ALFRED detailed record information

Polymorphism Information

NameALFRED UIDLocus NameLocus Symbol
5-site haplotypeSI003966YSolute carrier family 45, member 2SLC45A2
Synonyms:
Frequency Display Formats:     
Estimated Heterozygosity: 
External Resources: 
References: See References
Polymorphism Description:  The 5 sites ordered from 5¿ to 3¿ are
Glu272Lys (UID=SI003961T)
(AAC)n STRP (UID=SI003965X)
Thr329Thr (UID=SI003962U)
Leu374Phe (UID=SI003963V)
Val507Leu (UID=SI003964W)

Alleles:
Allele NameAllele SymbolDescription
A-4-A-G-GA-4-A-G-GLys-4 repeat-Thr(A)-Leu-Val
A-4-G-C-GA-4-G-C-GLys-4 repeat-Thr(G)-Phe-Val
A-4-G-G-GA-4-G-G-GLys-4 repeat-Thr(G)-Leu-Val
G-4-A-G-CG-4-A-G-CGlu-4 repeat-Thr(A)-Leu-Leu
G-4-G-C-GG-4-G-C-GGlu-4 repeat-Thr(G)-Phe-Val
G-4-G-G-GG-4-G-G-GGlu-4 repeat-Thr(G)-Leu-Val
G-5-A-G-GG-5-A-G-GGlu-5 repeat-Thr(A)-Leu-Val
G-5-G-G-GG-5-G-G-GGlu-5 repeat-Thr(G)-Leu-Val

References:
- Yuasa I, Umetsu K, Watanabe G, Nakamura H, Endoh M, Irizawa Y. "MATP polymorphisms in Germans and Japanese: the L374F mutation as a population marker for Caucasoids". Int J Legal Med. 118:364-366. (2004)
Online citation.


© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan