00ALFRED detailed record information
Synonyms: rs12913832 ; C__30724404_10 ;
|Fst||Avg Het||# Populations Typed|
Frequency Display Formats:
External Resources: dbSNP rs# Record PharmGKB Variant Information Record
References: See References
Polymorphism Description: This is a A/G SNP in an intronic region of the HERC2 gene and just upstream of OCA2. The derived G allele of this SNP is common only in Europeans particularly those of Northwestern and Eastern European descent. This G allele of this SNP has been associated with the blue iris phenotype. This SNP is commonly included in panels of ancestry informative SNPs and in phenotype informative markers.
Ancestral Allele: A
|Allele Name||Allele Symbol||Description|
|A||A||5' - cagtttcatttgagcattaa A tgtcaagttctgcacgctat - 3'|
|G||G||5' - cagtttcatttgagcattaa G tgtcaagttctgcacgctat - 3'|
- Phillips C, Salas A, Sánchez JJ, Fondevila M, Gómez-Tato A, Álvarez-Dios J, Calaza M, Casares de Cal M , Ballard D, Lareu MV, Carracedo A - The SNPforID Consortium "Inferring ancestral origin using a single multiplex assay of ancestry-informative marker SNPs". Forensic Science International: Genetics 1:273-280. (2007) Online citation.
© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan