ALFRED: allele frequency database
      The ALlele FREquency Database   
ALFRED is a resource of gene frequency data on human populations
supported by the Yale Center for Medical Informatics.

Sample Information:

Population NameSample NameALFRED UIDNumber of Chromosomes
MbutiMbuti Pygmies, HGDP-CEPHSA001466R30

Relation to Other Samples: Subset of SA000006G
Estimated heterozygosities for various sites: 
Sample Description: This sample is part of the Human Genome Diversity Cell Line Panel collected by the Human Genome Diversity Project (HGDP) and the Foundation Jean Dausset (CEPH).

The sample is composed of Nilosaharan and Niger Kordofanian speaking Mbuti pygmies from the northeastern part of the Ituri Forest (northeastern Democratic Republic of the Congo). It was collected by L.L. Cavalli-Sforza in 1986.

Note: In many publications subset H952 of the HGDP panel (with first and second degree relatives excluded from the original set) was typed and for this population that decreases the sample size from 15 to 13 individuals. Studies that typed H971 subset with only the first degree relatives excluded the sample size decreases from 15 to 13 individuals.
References:
- Rosenberg NA, Pritchard JK, Weber JL, Cann HM, Kidd KK, Zhivotovsky LA, Feldman MW. "Genetic structure of human populations". Science 298:2381-2385. (2002) Online citation.



© 2019 Kenneth K Kidd, Yale University. All rights reserved. The full Copyright Notification is also available.
Originally prototyped by Michael Osier with the aid of Kei Cheung
Upgrades and maintenance since 2002 by Haseena Rajeevan